RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 Q8N814 137 aa10.08□□□□□ -0.8
ACTN1-217ENST00000556203 MAPKAPK5-AS1Q8N8E1 139 aa10.08□□□□□ -0.8
ACTN1-217ENST00000556203 MRAP2Q96G30 205 aa10.08□□□□□ -0.8
ACTN1-217ENST00000556203 SDHAF1A6NFY7 115 aa10.07□□□□□ -0.8
ACTN1-217ENST00000556203 CAMPP49913 170 aa10.07□□□□□ -0.8
ACTN1-217ENST00000556203 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
ACTN1-217ENST00000556203 TRBV6-5A0A0K0K1A5 114 aa10.06□□□□□ -0.8
ACTN1-217ENST00000556203 UBE2L6O14933 153 aa10.06□□□□□ -0.8
ACTN1-217ENST00000556203 LECT2O14960 151 aa10.06□□□□□ -0.8
ACTN1-217ENST00000556203 RPS10P46783 165 aaKnown RBP10.06□□□□□ -0.8
ACTN1-217ENST00000556203 PNRC1Q12796 327 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-217ENST00000556203 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
ACTN1-217ENST00000556203 LINC00269Q8N2A0 174 aa10.06□□□□□ -0.8
ACTN1-217ENST00000556203 C1orf43Q9BWL3 253 aa10.06□□□□□ -0.8
ACTN1-217ENST00000556203 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
ACTN1-217ENST00000556203 IGLV5-52A0A0A0MRZ9 124 aa10.05□□□□□ -0.8
ACTN1-217ENST00000556203 A0A1B0GW15 77 aa10.05□□□□□ -0.8
ACTN1-217ENST00000556203 SMKR1H3BMG3 65 aa10.05□□□□□ -0.8
ACTN1-217ENST00000556203 I3L3M4 83 aa10.05□□□□□ -0.8
ACTN1-217ENST00000556203 PPP1R2P9O14990 202 aa10.05□□□□□ -0.8
ACTN1-217ENST00000556203 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
ACTN1-217ENST00000556203 NCR2O95944 276 aa10.05□□□□□ -0.8
ACTN1-217ENST00000556203 MRPL54Q6P161 138 aaKnown RBP10.05□□□□□ -0.8
ACTN1-217ENST00000556203 PRR34Q9NV39 138 aa10.05□□□□□ -0.8
ACTN1-217ENST00000556203 IGLV4-60A0A075B6I1 120 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 A0A1B0GUV1 79 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 APCSP02743 223 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 PMCHP20382 165 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 HBBP68871 147 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 MIAQ16674 131 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 FAM104BQ5XKR9 115 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 UQCC3Q6UW78 93 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 C20orf203Q8NBC4 194 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 NTN5Q8WTR8 489 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-217ENST00000556203 TMEM70Q9BUB7 260 aa10.04□□□□□ -0.8
ACTN1-217ENST00000556203 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-217ENST00000556203 A0A1B0GXF2 115 aa10.02□□□□□ -0.81
ACTN1-217ENST00000556203 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-217ENST00000556203 MT-ND4LP03901 98 aa10.02□□□□□ -0.81
ACTN1-217ENST00000556203 S100A8P05109 93 aa10.02□□□□□ -0.81
ACTN1-217ENST00000556203 GCSHP23434 173 aa10.02□□□□□ -0.81
ACTN1-217ENST00000556203 KRTAP10-1P60331 282 aa10.02□□□□□ -0.81
ACTN1-217ENST00000556203 REG3AQ06141 175 aa10.02□□□□□ -0.81
ACTN1-217ENST00000556203 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.81
ACTN1-217ENST00000556203 NRACQ8N912 160 aa10.02□□□□□ -0.81
ACTN1-217ENST00000556203 ANAPC16Q96DE5 110 aa10.02□□□□□ -0.81
ACTN1-217ENST00000556203 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
ACTN1-217ENST00000556203 TMEM218A2RU14 115 aa10.01□□□□□ -0.81
ACTN1-217ENST00000556203 F8W036 122 aa10.01□□□□□ -0.81
ACTN1-217ENST00000556203 PPP1R17O96001 155 aa10.01□□□□□ -0.81
ACTN1-217ENST00000556203 TSHBP01222 138 aa10.01□□□□□ -0.81
ACTN1-217ENST00000556203 HLA-DQA1P01909 254 aa10.01□□□□□ -0.81
ACTN1-217ENST00000556203 ADCYAP1P18509 176 aa10.01□□□□□ -0.81
ACTN1-217ENST00000556203 POLR2KP53803 58 aaKnown RBP10.01□□□□□ -0.81
ACTN1-217ENST00000556203 IGLV2-33A0A075B6J2 118 aaPredicted RBP10□□□□□ -0.81
ACTN1-217ENST00000556203 TRBV27A0A0K0K1C4 114 aa10□□□□□ -0.81
ACTN1-217ENST00000556203 SUMO2P61956 95 aaKnown RBP10□□□□□ -0.81
ACTN1-217ENST00000556203 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
ACTN1-217ENST00000556203 RNASEKQ6P5S7 137 aaKnown RBP10□□□□□ -0.81
ACTN1-217ENST00000556203 ATP5L2Q7Z4Y8 100 aa10□□□□□ -0.81
ACTN1-217ENST00000556203 COMMD7Q86VX2 200 aa10□□□□□ -0.81
ACTN1-217ENST00000556203 APOBP04114 4563 aaKnown RBP10□□□□□ -0.81
ACTN1-217ENST00000556203 IGLV10-54A0A075B6I4 117 aa9.99□□□□□ -0.81
ACTN1-217ENST00000556203 LINC00862A6NCI5 91 aa9.99□□□□□ -0.81
ACTN1-217ENST00000556203 H7C423 109 aa9.99□□□□□ -0.81
ACTN1-217ENST00000556203 VCYO14598 125 aa9.99□□□□□ -0.81
ACTN1-217ENST00000556203 FGF6P10767 208 aa9.99□□□□□ -0.81
ACTN1-217ENST00000556203 CKS2P33552 79 aa9.99□□□□□ -0.81
ACTN1-217ENST00000556203 HSPG2P98160 4391 aa9.99□□□□□ -0.81
ACTN1-217ENST00000556203 ESDP10768 282 aa9.98□□□□□ -0.81
ACTN1-217ENST00000556203 KRTAP26-1Q6PEX3 210 aa9.98□□□□□ -0.81
ACTN1-217ENST00000556203 TRAV8-4A0A0B4J246 113 aa9.97□□□□□ -0.81
ACTN1-217ENST00000556203 D6R8Y8 96 aa9.97□□□□□ -0.81
ACTN1-217ENST00000556203 FCER1GP30273 86 aa9.97□□□□□ -0.81
ACTN1-217ENST00000556203 IGKV3OR2-268A0A0C4DH90 116 aa9.96□□□□□ -0.82
ACTN1-217ENST00000556203 C7orf77A4D0Y5 90 aa9.96□□□□□ -0.82
ACTN1-217ENST00000556203 USP17L23D6RBM5 183 aa9.96□□□□□ -0.82
ACTN1-217ENST00000556203 TNFRSF6BO95407 300 aa9.96□□□□□ -0.82
ACTN1-217ENST00000556203 C14orf177Q52M58 125 aa9.96□□□□□ -0.82
ACTN1-217ENST00000556203 KIR2DL4Q99706 377 aa9.96□□□□□ -0.82
ACTN1-217ENST00000556203 C20orf78Q9BR46 151 aa9.96□□□□□ -0.82
ACTN1-217ENST00000556203 TRBV24-1A0A075B6N3 115 aa9.95□□□□□ -0.82
ACTN1-217ENST00000556203 ZNF25P17030 456 aaPredicted RBP9.95□□□□□ -0.82
ACTN1-217ENST00000556203 TMEM101Q96IK0 257 aa9.95□□□□□ -0.82
ACTN1-217ENST00000556203 BTF3L4Q96K17 158 aa9.95□□□□□ -0.82
ACTN1-217ENST00000556203 SEC11CQ9BY50 192 aa9.95□□□□□ -0.82
ACTN1-217ENST00000556203 NPYP01303 97 aa9.94□□□□□ -0.82
ACTN1-217ENST00000556203 PPBPP02775 128 aa9.94□□□□□ -0.82
ACTN1-217ENST00000556203 XGP55808 180 aa9.94□□□□□ -0.82
ACTN1-217ENST00000556203 OR5A1Q8NGJ0 315 aa9.94□□□□□ -0.82
ACTN1-217ENST00000556203 KRTAP17-1Q9BYP8 105 aa9.94□□□□□ -0.82
ACTN1-217ENST00000556203 RPL32P62910 135 aaKnown RBP9.93□□□□□ -0.82
ACTN1-217ENST00000556203 TMEM136Q6ZRR5 245 aa9.93□□□□□ -0.82
ACTN1-217ENST00000556203 ORMDL3Q8N138 153 aa9.93□□□□□ -0.82
ACTN1-217ENST00000556203 IMMP2LQ96T52 175 aa9.93□□□□□ -0.82
ACTN1-217ENST00000556203 PHOX2AO14813 284 aa9.92□□□□□ -0.82
ACTN1-217ENST00000556203 LINC01620Q4KN68 170 aa9.92□□□□□ -0.82
ACTN1-217ENST00000556203 MRPL52Q86TS9 123 aaKnown RBP9.92□□□□□ -0.82
ACTN1-217ENST00000556203 SMIM2Q9BVW6 85 aa9.92□□□□□ -0.82
ACTN1-217ENST00000556203 CTDSP1Q9GZU7 261 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms