RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 CD28P10747 220 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 XGP55808 180 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 LINC00315P59091 139 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 FHL3Q13643 280 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 Q8N2B8 174 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 CARD19Q96LW7 228 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 TRBV7-9A0A0J9YWB2 115 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 A8MWV9 139 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 NXPH4O95158 308 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 MT-ATP8P03928 68 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 ERG28Q9UKR5 140 aa10.92□□□□□ -0.66
XRCC3-211ENST00000555055 IGHV3-16A0A0C4DH30 117 aa10.91□□□□□ -0.66
XRCC3-211ENST00000555055 LOC107984156A0A0G2JMH3 177 aa10.91□□□□□ -0.66
XRCC3-211ENST00000555055 SUMO4Q6EEV6 95 aa10.91□□□□□ -0.66
XRCC3-211ENST00000555055 ARL17AQ8IVW1 177 aa10.91□□□□□ -0.66
XRCC3-211ENST00000555055 C10orf126Q8N4M7 172 aa10.91□□□□□ -0.66
XRCC3-211ENST00000555055 TMEM141Q96I45 108 aa10.91□□□□□ -0.66
XRCC3-211ENST00000555055 KIF25-AS1Q9Y6Z4 181 aa10.91□□□□□ -0.66
XRCC3-211ENST00000555055 IGLV4-69A0A075B6H9 119 aa10.91□□□□□ -0.66
XRCC3-211ENST00000555055 DYNLRB2Q8TF09 96 aa10.91□□□□□ -0.66
XRCC3-211ENST00000555055 C11orf86A6NJI1 115 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 CRYGDP07320 174 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 ZFP2Q6ZN57 461 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 SLC25A29Q8N8R3 303 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 RAX2Q96IS3 184 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 LINC01600Q96MT4 127 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 TCL1BO95988 128 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 IGHV3-30P01768 117 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 IGHV3-30-5P0DP03 117 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 C4orf3Q8WVX3 66 aa10.9□□□□□ -0.66
XRCC3-211ENST00000555055 IGHV1OR15-1A0A075B7D0 117 aa10.89□□□□□ -0.67
XRCC3-211ENST00000555055 PMVKQ15126 192 aa10.89□□□□□ -0.67
XRCC3-211ENST00000555055 TIMM17AQ99595 171 aa10.89□□□□□ -0.67
XRCC3-211ENST00000555055 CITED2Q99967 270 aaPredicted RBP10.89□□□□□ -0.67
XRCC3-211ENST00000555055 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
XRCC3-211ENST00000555055 EMP1P54849 157 aa10.89□□□□□ -0.67
XRCC3-211ENST00000555055 PROK1P58294 105 aa10.89□□□□□ -0.67
XRCC3-211ENST00000555055 ZNF56Q15929 161 aa10.89□□□□□ -0.67
XRCC3-211ENST00000555055 ZNF256Q9Y2P7 627 aaPredicted RBP10.89□□□□□ -0.67
XRCC3-211ENST00000555055 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
XRCC3-211ENST00000555055 ZNF876PQ49A33 203 aa10.88□□□□□ -0.67
XRCC3-211ENST00000555055 CFC1BP0CG36 223 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 CFC1P0CG37 223 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 P0DMU3 169 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 FAM231AP0DMU4 169 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 FAM231CP0DMU5 169 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 Q9UF83 564 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 PRO1854Q9UHT4 67 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 H3BMM0 161 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 TSHBP01222 138 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 NBEAL2Q6ZNJ1 2754 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 TENM1Q9UKZ4 2725 aa10.87□□□□□ -0.67
XRCC3-211ENST00000555055 DUSP14O95147 198 aaKnown RBP10.86□□□□□ -0.67
XRCC3-211ENST00000555055 C9orf85Q96MD7 179 aa10.86□□□□□ -0.67
XRCC3-211ENST00000555055 MAP6D1Q9H9H5 199 aa10.86□□□□□ -0.67
XRCC3-211ENST00000555055 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
XRCC3-211ENST00000555055 IGHV3OR16-12A0A075B7B8 117 aa10.86□□□□□ -0.67
XRCC3-211ENST00000555055 DEFB114Q30KQ6 69 aa10.86□□□□□ -0.67
XRCC3-211ENST00000555055 RNF183Q96D59 192 aa10.86□□□□□ -0.67
XRCC3-211ENST00000555055 CITED1Q99966 193 aa10.86□□□□□ -0.67
XRCC3-211ENST00000555055 PEMTQ9UBM1 199 aa10.86□□□□□ -0.67
XRCC3-211ENST00000555055 POLR2KP53803 58 aaKnown RBP10.85□□□□□ -0.67
XRCC3-211ENST00000555055 ANKRD29Q8N6D5 301 aa10.85□□□□□ -0.67
XRCC3-211ENST00000555055 PTH2Q96A98 100 aa10.85□□□□□ -0.67
XRCC3-211ENST00000555055 AMELXQ99217 191 aa10.85□□□□□ -0.67
XRCC3-211ENST00000555055 ZFAND6Q6FIF0 208 aa10.85□□□□□ -0.67
XRCC3-211ENST00000555055 A0A0B4J2C4 111 aa10.84□□□□□ -0.67
XRCC3-211ENST00000555055 SDHAF1A6NFY7 115 aa10.84□□□□□ -0.67
XRCC3-211ENST00000555055 LINC01006Q8NI28 216 aa10.84□□□□□ -0.67
XRCC3-211ENST00000555055 WFDC10AQ9H1F0 79 aa10.84□□□□□ -0.67
XRCC3-211ENST00000555055 XCL2Q9UBD3 114 aa10.84□□□□□ -0.67
XRCC3-211ENST00000555055 TP53TG1Q9Y2A0 90 aa10.84□□□□□ -0.67
XRCC3-211ENST00000555055 CCL24O00175 119 aa10.83□□□□□ -0.68
XRCC3-211ENST00000555055 VCYO14598 125 aa10.83□□□□□ -0.68
XRCC3-211ENST00000555055 OPRPNQ99935 248 aaPredicted RBP10.83□□□□□ -0.68
XRCC3-211ENST00000555055 TRRAPQ9Y4A5 3859 aa10.83□□□□□ -0.68
XRCC3-211ENST00000555055 TRBV6-5A0A0K0K1A5 114 aa10.83□□□□□ -0.68
XRCC3-211ENST00000555055 SLC25A20O43772 301 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 SCGB1C2P0DMR2 95 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 TEX29Q8N6K0 151 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 ODF3Q96PU9 254 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 ANAPC13Q9BS18 74 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 J3QQQ9 107 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 TSPEAR-AS2P59090 65 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 NSUN5P1Q3KNT7 163 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 ODF3L2Q3SX64 289 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 Q6Q795 121 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 KIR2DL4Q99706 377 aa10.82□□□□□ -0.68
XRCC3-211ENST00000555055 HIVEP1P15822 2718 aa10.81□□□□□ -0.68
XRCC3-211ENST00000555055 TRBV27A0A0K0K1C4 114 aa10.81□□□□□ -0.68
XRCC3-211ENST00000555055 M0QY20 66 aa10.81□□□□□ -0.68
XRCC3-211ENST00000555055 IGHV3-33P01772 117 aa10.81□□□□□ -0.68
XRCC3-211ENST00000555055 LINC01587Q99440 93 aa10.81□□□□□ -0.68
XRCC3-211ENST00000555055 NSD1Q96L73 2696 aaPredicted RBP10.81□□□□□ -0.68
XRCC3-211ENST00000555055 LEPROTO15243 131 aa10.8□□□□□ -0.68
XRCC3-211ENST00000555055 LGALS3P17931 250 aaKnown RBP10.8□□□□□ -0.68
XRCC3-211ENST00000555055 GAGE5Q13069 117 aa10.8□□□□□ -0.68
XRCC3-211ENST00000555055 GAGE6Q13070 117 aa10.8□□□□□ -0.68
XRCC3-211ENST00000555055 SFTA2Q6UW10 78 aa10.8□□□□□ -0.68
XRCC3-211ENST00000555055 TMEM263Q8WUH6 116 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms