RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 TMEM61Q8N0U2 210 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 KLLNB2CW77 178 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 M0QY20 66 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 CFC1BP0CG36 223 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 CFC1P0CG37 223 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 POLR2KP53803 58 aaKnown RBP8.78□□□□□ -1
XRCC3-208ENST00000554811 TOMM7Q9P0U1 55 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 IGIPA6NJ69 53 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 C3orf56Q8N813 242 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 LINC01356Q8N9X3 169 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 TMEM141Q96I45 108 aa8.78□□□□□ -1
XRCC3-208ENST00000554811 M0QXV9 152 aa8.77□□□□□ -1
XRCC3-208ENST00000554811 TRGV11A0A075B6L2 103 aa8.77□□□□□ -1.01
XRCC3-208ENST00000554811 LINC00315P59091 139 aa8.77□□□□□ -1.01
XRCC3-208ENST00000554811 FOXI1Q12951 378 aa8.77□□□□□ -1.01
XRCC3-208ENST00000554811 MEIG1Q5JSS6 88 aa8.77□□□□□ -1.01
XRCC3-208ENST00000554811 CRIP2P52943 208 aaPredicted RBP8.76□□□□□ -1.01
XRCC3-208ENST00000554811 NDUFA12Q9UI09 145 aa8.76□□□□□ -1.01
XRCC3-208ENST00000554811 TEP1Q99973 2627 aaKnown RBP8.76□□□□□ -1.01
XRCC3-208ENST00000554811 IGLV1-40P01703 118 aa8.76□□□□□ -1.01
XRCC3-208ENST00000554811 MT-ATP8P03928 68 aa8.76□□□□□ -1.01
XRCC3-208ENST00000554811 PSMB8P28062 276 aa8.76□□□□□ -1.01
XRCC3-208ENST00000554811 ANKRD29Q8N6D5 301 aa8.76□□□□□ -1.01
XRCC3-208ENST00000554811 C20orf203Q8NBC4 194 aa8.76□□□□□ -1.01
XRCC3-208ENST00000554811 K7EQG2 157 aa8.76□□□□□ -1.01
XRCC3-208ENST00000554811 C10orf126Q8N4M7 172 aa8.76□□□□□ -1.01
XRCC3-208ENST00000554811 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
XRCC3-208ENST00000554811 KIF25-AS1Q9Y6Z4 181 aa8.76□□□□□ -1.01
XRCC3-208ENST00000554811 RHODO00212 210 aa8.75□□□□□ -1.01
XRCC3-208ENST00000554811 SLC25A20O43772 301 aa8.75□□□□□ -1.01
XRCC3-208ENST00000554811 ZNF22P17026 224 aaPredicted RBP8.75□□□□□ -1.01
XRCC3-208ENST00000554811 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
XRCC3-208ENST00000554811 NFE4Q86UQ8 179 aa8.75□□□□□ -1.01
XRCC3-208ENST00000554811 C1QTNF4Q9BXJ3 329 aa8.75□□□□□ -1.01
XRCC3-208ENST00000554811 C11orf68Q9H3H3 251 aaKnown RBP8.75□□□□□ -1.01
XRCC3-208ENST00000554811 LINC01546A6NGU7 62 aa8.75□□□□□ -1.01
XRCC3-208ENST00000554811 H3BUA1 57 aa8.75□□□□□ -1.01
XRCC3-208ENST00000554811 IGHV3-30-3P0DP02 117 aa8.75□□□□□ -1.01
XRCC3-208ENST00000554811 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 ANAPC13Q9BS18 74 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
XRCC3-208ENST00000554811 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 KRTAP10-9P60411 292 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
XRCC3-208ENST00000554811 Q6ZUT4 128 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 TIMM17AQ99595 171 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 VPREB3Q9UKI3 123 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 GAGE12JA6NER3 117 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 NDUFA7O95182 113 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 IGHV3-30P01768 117 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 IGHV3-30-5P0DP03 117 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 GAGE4Q13068 117 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 GAGE5Q13069 117 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 STHQ8IWL8 128 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 CLEC2BQ92478 149 aa8.74□□□□□ -1.01
XRCC3-208ENST00000554811 C19orf54Q5BKX5 351 aa8.73□□□□□ -1.01
XRCC3-208ENST00000554811 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
XRCC3-208ENST00000554811 Q6ZSN1 163 aa8.73□□□□□ -1.01
XRCC3-208ENST00000554811 SLC25A29Q8N8R3 303 aa8.73□□□□□ -1.01
XRCC3-208ENST00000554811 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
XRCC3-208ENST00000554811 RNF183Q96D59 192 aa8.73□□□□□ -1.01
XRCC3-208ENST00000554811 Q96MF0 132 aa8.73□□□□□ -1.01
XRCC3-208ENST00000554811 K7EMT4 169 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 ZNF415Q09FC8 603 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 TRGV2A0A075B6R0 118 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 MED14OSP0DP75 135 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 PRORYQ9H606 182 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 ATRQ13535 2644 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 M0R2P5 195 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 LGALS9O00182 355 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 PPDPFLQ8WWR9 84 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 LINC00467Q9BRT7 94 aa8.72□□□□□ -1.01
XRCC3-208ENST00000554811 LEPROTO15243 131 aa8.71□□□□□ -1.01
XRCC3-208ENST00000554811 A0A0J9YXY3 114 aa8.71□□□□□ -1.02
XRCC3-208ENST00000554811 COX6CP09669 75 aa8.71□□□□□ -1.02
XRCC3-208ENST00000554811 C2orf82Q6UX34 121 aa8.71□□□□□ -1.02
XRCC3-208ENST00000554811 UBE2D1P51668 147 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 TRBV20-1A0A075B6N2 111 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 TMEM223A0PJW6 202 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 NSUN5P1Q3KNT7 163 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 TEN1Q86WV5 123 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 TEX49A0A1B0GTD5 131 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 ELANEP08246 267 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 RHOHQ15669 191 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 WFDC10AQ9H1F0 79 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
XRCC3-208ENST00000554811 LINC01619G3V211 115 aa8.69□□□□□ -1.02
XRCC3-208ENST00000554811 RPL13AP40429 203 aaKnown RBP8.69□□□□□ -1.02
XRCC3-208ENST00000554811 XGP55808 180 aa8.69□□□□□ -1.02
XRCC3-208ENST00000554811 UBE2L6O14933 153 aa8.69□□□□□ -1.02
XRCC3-208ENST00000554811 MRPL23Q16540 153 aaKnown RBP8.69□□□□□ -1.02
XRCC3-208ENST00000554811 FAM19A4Q96LR4 140 aa8.69□□□□□ -1.02
XRCC3-208ENST00000554811 PEMTQ9UBM1 199 aa8.69□□□□□ -1.02
XRCC3-208ENST00000554811 SNCGO76070 127 aa8.69□□□□□ -1.02
XRCC3-208ENST00000554811 PRO0461Q9UI25 63 aa8.69□□□□□ -1.02
XRCC3-208ENST00000554811 H3BMM0 161 aa8.68□□□□□ -1.02
XRCC3-208ENST00000554811 GAGE7O76087 117 aa8.68□□□□□ -1.02
XRCC3-208ENST00000554811 GAGE12FP0CL80 117 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms