RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 HSBP1L1C9JCN9 74 aa8.75□□□□□ -1.01
SHMT2-214ENST00000554604 F5H768 121 aa8.75□□□□□ -1.01
SHMT2-214ENST00000554604 ATP5LO75964 103 aa8.75□□□□□ -1.01
SHMT2-214ENST00000554604 MAJINQ3KP22 176 aa8.75□□□□□ -1.01
SHMT2-214ENST00000554604 SUMO4Q6EEV6 95 aa8.75□□□□□ -1.01
SHMT2-214ENST00000554604 JPT2Q9H910 190 aa8.75□□□□□ -1.01
SHMT2-214ENST00000554604 NOP10Q9NPE3 64 aaKnown RBP8.75□□□□□ -1.01
SHMT2-214ENST00000554604 NACAE9PAV3 2078 aa8.75□□□□□ -1.01
SHMT2-214ENST00000554604 PLAC8L1A1L4L8 177 aa8.74□□□□□ -1.01
SHMT2-214ENST00000554604 H0Y8G0 127 aa8.74□□□□□ -1.01
SHMT2-214ENST00000554604 TCAPO15273 167 aa8.74□□□□□ -1.01
SHMT2-214ENST00000554604 ATP5G1P05496 136 aa8.74□□□□□ -1.01
SHMT2-214ENST00000554604 CRYGDP07320 174 aa8.74□□□□□ -1.01
SHMT2-214ENST00000554604 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
SHMT2-214ENST00000554604 RNASE8Q8TDE3 154 aaKnown RBP8.74□□□□□ -1.01
SHMT2-214ENST00000554604 A0A087WWL8 130 aa8.73□□□□□ -1.01
SHMT2-214ENST00000554604 LINC01549A6NIU2 74 aa8.73□□□□□ -1.01
SHMT2-214ENST00000554604 M0R2P5 195 aa8.73□□□□□ -1.01
SHMT2-214ENST00000554604 G0S2P27469 103 aa8.73□□□□□ -1.01
SHMT2-214ENST00000554604 POLR2KP53803 58 aaKnown RBP8.73□□□□□ -1.01
SHMT2-214ENST00000554604 ZNF876PQ49A33 203 aa8.73□□□□□ -1.01
SHMT2-214ENST00000554604 SPXQ9BT56 116 aa8.73□□□□□ -1.01
SHMT2-214ENST00000554604 hDV102S1A0JD36 115 aa8.72□□□□□ -1.01
SHMT2-214ENST00000554604 A8MWV9 139 aa8.72□□□□□ -1.01
SHMT2-214ENST00000554604 F5H697 171 aa8.72□□□□□ -1.01
SHMT2-214ENST00000554604 M0R143 59 aa8.72□□□□□ -1.01
SHMT2-214ENST00000554604 NUDT3O95989 172 aa8.72□□□□□ -1.01
SHMT2-214ENST00000554604 TOMM6Q96B49 74 aa8.72□□□□□ -1.01
SHMT2-214ENST00000554604 C18orf15Q96N68 181 aa8.72□□□□□ -1.01
SHMT2-214ENST00000554604 C2orf88Q9BSF0 95 aa8.72□□□□□ -1.01
SHMT2-214ENST00000554604 DNAH10Q8IVF4 4471 aa8.72□□□□□ -1.01
SHMT2-214ENST00000554604 M0QY20 66 aa8.71□□□□□ -1.02
SHMT2-214ENST00000554604 M0R2N4 97 aa8.71□□□□□ -1.02
SHMT2-214ENST00000554604 VCYO14598 125 aa8.71□□□□□ -1.02
SHMT2-214ENST00000554604 HNRNPA3P51991 378 aaKnown RBP8.71□□□□□ -1.02
SHMT2-214ENST00000554604 ZNF56Q15929 161 aa8.71□□□□□ -1.02
SHMT2-214ENST00000554604 Q6ZN92 141 aa8.71□□□□□ -1.02
SHMT2-214ENST00000554604 C11orf72Q8NBR9 251 aa8.71□□□□□ -1.02
SHMT2-214ENST00000554604 DNAH6Q9C0G6 4158 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 GAGE12BA1L429 117 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 H7C1H1 209 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 GAGE7O76087 117 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 GAGE12FP0CL80 117 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 GAGE12GP0CL81 117 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 GAGE12IP0CL82 117 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 ODF1Q14990 250 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 FAM74A4Q5TZK3 123 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 PMCHL2Q9BQD1 86 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 MRPS16Q9Y3D3 137 aaKnown RBP8.7□□□□□ -1.02
SHMT2-214ENST00000554604 BIRC6Q9NR09 4857 aa8.7□□□□□ -1.02
SHMT2-214ENST00000554604 TRAV12-1A0A0B4J245 112 aa8.69□□□□□ -1.02
SHMT2-214ENST00000554604 TRBV27A0A0K0K1C4 114 aa8.69□□□□□ -1.02
SHMT2-214ENST00000554604 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.69□□□□□ -1.02
SHMT2-214ENST00000554604 EREGO14944 169 aa8.69□□□□□ -1.02
SHMT2-214ENST00000554604 PRSS1P07477 247 aa8.69□□□□□ -1.02
SHMT2-214ENST00000554604 UFSP1Q6NVU6 142 aa8.69□□□□□ -1.02
SHMT2-214ENST00000554604 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
SHMT2-214ENST00000554604 RHODO00212 210 aa8.68□□□□□ -1.02
SHMT2-214ENST00000554604 SLC25A34Q6PIV7 304 aa8.68□□□□□ -1.02
SHMT2-214ENST00000554604 C2orf66Q6UXQ4 117 aa8.68□□□□□ -1.02
SHMT2-214ENST00000554604 LINC00336Q6ZUF6 198 aa8.68□□□□□ -1.02
SHMT2-214ENST00000554604 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
SHMT2-214ENST00000554604 KIR2DL4Q99706 377 aa8.68□□□□□ -1.02
SHMT2-214ENST00000554604 A0A087WX48 190 aa8.67□□□□□ -1.02
SHMT2-214ENST00000554604 RS1O15537 224 aa8.67□□□□□ -1.02
SHMT2-214ENST00000554604 COX8AP10176 69 aa8.67□□□□□ -1.02
SHMT2-214ENST00000554604 CCL18P55774 89 aa8.67□□□□□ -1.02
SHMT2-214ENST00000554604 DAZ2Q13117 558 aaKnown RBP8.67□□□□□ -1.02
SHMT2-214ENST00000554604 RHOHQ15669 191 aa8.67□□□□□ -1.02
SHMT2-214ENST00000554604 ZFP2Q6ZN57 461 aa8.67□□□□□ -1.02
SHMT2-214ENST00000554604 ERASQ7Z444 233 aa8.67□□□□□ -1.02
SHMT2-214ENST00000554604 LINC00612Q8N6U2 182 aa8.67□□□□□ -1.02
SHMT2-214ENST00000554604 CYSLTR1Q9Y271 337 aa8.67□□□□□ -1.02
SHMT2-214ENST00000554604 TRGV2A0A075B6R0 118 aa8.66□□□□□ -1.02
SHMT2-214ENST00000554604 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
SHMT2-214ENST00000554604 TRGV1A0A0A0MS02 117 aa8.66□□□□□ -1.02
SHMT2-214ENST00000554604 DPM2O94777 84 aa8.66□□□□□ -1.02
SHMT2-214ENST00000554604 IGKCP01834 107 aa8.66□□□□□ -1.02
SHMT2-214ENST00000554604 ANKRD39Q53RE8 183 aa8.66□□□□□ -1.02
SHMT2-214ENST00000554604 Q6ZTI0 123 aa8.66□□□□□ -1.02
SHMT2-214ENST00000554604 A0A0J9YY99 117 aa8.65□□□□□ -1.02
SHMT2-214ENST00000554604 CFAP126Q5VTH2 177 aa8.65□□□□□ -1.02
SHMT2-214ENST00000554604 NEGR1Q7Z3B1 354 aa8.65□□□□□ -1.02
SHMT2-214ENST00000554604 NEXN-AS1Q8NBZ9 246 aa8.65□□□□□ -1.02
SHMT2-214ENST00000554604 F8VRH5 84 aa8.64□□□□□ -1.03
SHMT2-214ENST00000554604 I3L3M4 83 aa8.64□□□□□ -1.03
SHMT2-214ENST00000554604 DLEU1O43261 78 aa8.64□□□□□ -1.03
SHMT2-214ENST00000554604 PLNP26678 52 aa8.64□□□□□ -1.03
SHMT2-214ENST00000554604 Q6ZR54 194 aa8.64□□□□□ -1.03
SHMT2-214ENST00000554604 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
SHMT2-214ENST00000554604 DNAJC30Q96LL9 226 aa8.64□□□□□ -1.03
SHMT2-214ENST00000554604 TIMM17AQ99595 171 aa8.64□□□□□ -1.03
SHMT2-214ENST00000554604 MRPL16Q9NX20 251 aaKnown RBP8.64□□□□□ -1.03
SHMT2-214ENST00000554604 HHLA3Q9XRX5 114 aa8.64□□□□□ -1.03
SHMT2-214ENST00000554604 PRSS29PA6NIE9 313 aa8.63□□□□□ -1.03
SHMT2-214ENST00000554604 IGIPA6NJ69 53 aa8.63□□□□□ -1.03
SHMT2-214ENST00000554604 TSHBP01222 138 aa8.63□□□□□ -1.03
SHMT2-214ENST00000554604 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
SHMT2-214ENST00000554604 FGF6P10767 208 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms