RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 LINC01620Q4KN68 170 aa11.59□□□□□ -0.55
FOXN3-204ENST00000553840 FAM74A3Q4VXF1 159 aa11.59□□□□□ -0.55
FOXN3-204ENST00000553840 CLPSL2Q6UWE3 100 aa11.59□□□□□ -0.55
FOXN3-204ENST00000553840 A0A1B0GUV1 79 aa11.58□□□□□ -0.56
FOXN3-204ENST00000553840 A8MWL6 223 aa11.58□□□□□ -0.56
FOXN3-204ENST00000553840 PLA2G1BP04054 148 aaKnown RBP11.58□□□□□ -0.56
FOXN3-204ENST00000553840 REG3AQ06141 175 aa11.58□□□□□ -0.56
FOXN3-204ENST00000553840 COTL1Q14019 142 aa11.58□□□□□ -0.56
FOXN3-204ENST00000553840 TMEM241Q24JQ0 296 aa11.58□□□□□ -0.56
FOXN3-204ENST00000553840 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
FOXN3-204ENST00000553840 LINC01551Q86U37 167 aa11.58□□□□□ -0.56
FOXN3-204ENST00000553840 TRAV8-4A0A0B4J246 113 aa11.57□□□□□ -0.56
FOXN3-204ENST00000553840 USP17L23D6RBM5 183 aa11.57□□□□□ -0.56
FOXN3-204ENST00000553840 BORCS7Q96B45 105 aa11.57□□□□□ -0.56
FOXN3-204ENST00000553840 AMTP48728 403 aa11.56□□□□□ -0.56
FOXN3-204ENST00000553840 GTSF1Q8WW33 167 aa11.56□□□□□ -0.56
FOXN3-204ENST00000553840 ADIRFQ15847 76 aa11.55□□□□□ -0.56
FOXN3-204ENST00000553840 DGAT2L7PQ6IED9 249 aa11.55□□□□□ -0.56
FOXN3-204ENST00000553840 LINC00528Q8N1L1 170 aa11.55□□□□□ -0.56
FOXN3-204ENST00000553840 NAT8Q9UHE5 227 aa11.55□□□□□ -0.56
FOXN3-204ENST00000553840 RPL23P62829 140 aaKnown RBP11.54□□□□□ -0.56
FOXN3-204ENST00000553840 CT83Q5H943 113 aa11.54□□□□□ -0.56
FOXN3-204ENST00000553840 SCXQ7RTU7 201 aa11.54□□□□□ -0.56
FOXN3-204ENST00000553840 GATD1Q8NB37 220 aa11.54□□□□□ -0.56
FOXN3-204ENST00000553840 C20orf203Q8NBC4 194 aa11.54□□□□□ -0.56
FOXN3-204ENST00000553840 CHAC1Q9BUX1 264 aa11.54□□□□□ -0.56
FOXN3-204ENST00000553840 IGLV10-54A0A075B6I4 117 aa11.53□□□□□ -0.56
FOXN3-204ENST00000553840 TRAV26-2A0A0B4J265 109 aa11.53□□□□□ -0.56
FOXN3-204ENST00000553840 CLRN3Q8NCR9 226 aa11.53□□□□□ -0.56
FOXN3-204ENST00000553840 DEFB104AQ8WTQ1 72 aa11.53□□□□□ -0.56
FOXN3-204ENST00000553840 IGLV4-60A0A075B6I1 120 aa11.52□□□□□ -0.57
FOXN3-204ENST00000553840 NCR2O95944 276 aa11.52□□□□□ -0.57
FOXN3-204ENST00000553840 PRSS1P07477 247 aa11.52□□□□□ -0.57
FOXN3-204ENST00000553840 ISOC2Q96AB3 205 aa11.52□□□□□ -0.57
FOXN3-204ENST00000553840 OSTCQ9NRP0 149 aa11.52□□□□□ -0.57
FOXN3-204ENST00000553840 FOXA3P55318 350 aaPredicted RBP11.51□□□□□ -0.57
FOXN3-204ENST00000553840 AMMECR1LQ6DCA0 310 aa11.5□□□□□ -0.57
FOXN3-204ENST00000553840 KRTAP26-1Q6PEX3 210 aa11.5□□□□□ -0.57
FOXN3-204ENST00000553840 TSKUQ8WUA8 353 aa11.5□□□□□ -0.57
FOXN3-204ENST00000553840 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
FOXN3-204ENST00000553840 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
FOXN3-204ENST00000553840 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
FOXN3-204ENST00000553840 GFRA4Q9GZZ7 299 aa11.5□□□□□ -0.57
FOXN3-204ENST00000553840 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
FOXN3-204ENST00000553840 FAM231BA6NCW3 169 aa11.49□□□□□ -0.57
FOXN3-204ENST00000553840 SDHAF1A6NFY7 115 aa11.49□□□□□ -0.57
FOXN3-204ENST00000553840 H7C423 109 aa11.49□□□□□ -0.57
FOXN3-204ENST00000553840 APCSP02743 223 aa11.49□□□□□ -0.57
FOXN3-204ENST00000553840 C9orf163Q8N9P6 203 aa11.49□□□□□ -0.57
FOXN3-204ENST00000553840 CIRBP-AS1Q8TBR5 109 aa11.49□□□□□ -0.57
FOXN3-204ENST00000553840 SRRM2Q9UQ35 2752 aaKnown RBP11.48□□□□□ -0.57
FOXN3-204ENST00000553840 HIGD1CA8MV81 97 aa11.48□□□□□ -0.57
FOXN3-204ENST00000553840 COMMD7Q86VX2 200 aa11.48□□□□□ -0.57
FOXN3-204ENST00000553840 AP5S1Q9NUS5 200 aa11.48□□□□□ -0.57
FOXN3-204ENST00000553840 hDV102S1A0JD36 115 aa11.47□□□□□ -0.57
FOXN3-204ENST00000553840 I3L3M4 83 aa11.47□□□□□ -0.57
FOXN3-204ENST00000553840 PMCHP20382 165 aa11.47□□□□□ -0.57
FOXN3-204ENST00000553840 RNASEKQ6P5S7 137 aaKnown RBP11.47□□□□□ -0.57
FOXN3-204ENST00000553840 UQCC3Q6UW78 93 aa11.47□□□□□ -0.57
FOXN3-204ENST00000553840 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
FOXN3-204ENST00000553840 V9GYV3 84 aa11.47□□□□□ -0.57
FOXN3-204ENST00000553840 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.46□□□□□ -0.57
FOXN3-204ENST00000553840 ST20Q9HBF5 79 aa11.46□□□□□ -0.57
FOXN3-204ENST00000553840 FAT1Q14517 4588 aa11.45□□□□□ -0.58
FOXN3-204ENST00000553840 IGKV3OR2-268A0A0C4DH90 116 aa11.45□□□□□ -0.58
FOXN3-204ENST00000553840 TRBV6-5A0A0K0K1A5 114 aa11.45□□□□□ -0.58
FOXN3-204ENST00000553840 CFAP161Q6P656 301 aa11.45□□□□□ -0.58
FOXN3-204ENST00000553840 BTF3L4Q96K17 158 aa11.45□□□□□ -0.58
FOXN3-204ENST00000553840 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.44□□□□□ -0.58
FOXN3-204ENST00000553840 IGKV2-29A2NJV5 120 aaPredicted RBP11.44□□□□□ -0.58
FOXN3-204ENST00000553840 ZNF25P17030 456 aaPredicted RBP11.44□□□□□ -0.58
FOXN3-204ENST00000553840 CNBPP62633 177 aaKnown RBP11.44□□□□□ -0.58
FOXN3-204ENST00000553840 RIGQ13278 110 aa11.44□□□□□ -0.58
FOXN3-204ENST00000553840 TMEM101Q96IK0 257 aa11.44□□□□□ -0.58
FOXN3-204ENST00000553840 VPS13BQ7Z7G8 4022 aa11.43□□□□□ -0.58
FOXN3-204ENST00000553840 TMEM218A2RU14 115 aa11.43□□□□□ -0.58
FOXN3-204ENST00000553840 J3QL48 77 aa11.43□□□□□ -0.58
FOXN3-204ENST00000553840 FGF6P10767 208 aa11.43□□□□□ -0.58
FOXN3-204ENST00000553840 MRAP2Q96G30 205 aa11.43□□□□□ -0.58
FOXN3-204ENST00000553840 FLG2Q5D862 2391 aaPredicted RBP11.43□□□□□ -0.58
FOXN3-204ENST00000553840 LINC00862A6NCI5 91 aa11.42□□□□□ -0.58
FOXN3-204ENST00000553840 GAGE12HA6NDE8 117 aa11.42□□□□□ -0.58
FOXN3-204ENST00000553840 F8W036 122 aa11.42□□□□□ -0.58
FOXN3-204ENST00000553840 RAB4AP20338 218 aa11.42□□□□□ -0.58
FOXN3-204ENST00000553840 PNRC1Q12796 327 aaPredicted RBP11.42□□□□□ -0.58
FOXN3-204ENST00000553840 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
FOXN3-204ENST00000553840 DMBT1Q9UGM3 2413 aaPredicted RBP11.41□□□□□ -0.58
FOXN3-204ENST00000553840 PPP1R17O96001 155 aa11.41□□□□□ -0.58
FOXN3-204ENST00000553840 NUP35Q8NFH5 326 aa11.41□□□□□ -0.58
FOXN3-204ENST00000553840 IGHV3-64A0A075B6Q5 118 aa11.4□□□□□ -0.58
FOXN3-204ENST00000553840 SDIM1Q6ZPB5 146 aa11.4□□□□□ -0.58
FOXN3-204ENST00000553840 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
FOXN3-204ENST00000553840 DNAH8Q96JB1 4490 aa11.39□□□□□ -0.59
FOXN3-204ENST00000553840 SMIM27A0A1W2PRY6 76 aa11.39□□□□□ -0.59
FOXN3-204ENST00000553840 PPP1R2P9O14990 202 aa11.39□□□□□ -0.59
FOXN3-204ENST00000553840 ADCYAP1P18509 176 aa11.39□□□□□ -0.59
FOXN3-204ENST00000553840 AMN1Q8IY45 258 aa11.39□□□□□ -0.59
FOXN3-204ENST00000553840 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
FOXN3-204ENST00000553840 DPH3Q96FX2 82 aa11.39□□□□□ -0.59
FOXN3-204ENST00000553840 RNF185Q96GF1 192 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms