RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 HIST3H2BBQ8N257 126 aa8.23□□□□□ -1.09
NEK9-202ENST00000553823 PHLDA1Q8WV24 401 aaPredicted RBP8.23□□□□□ -1.09
NEK9-202ENST00000553823 DAZ3Q9NR90 486 aaKnown RBP8.23□□□□□ -1.09
NEK9-202ENST00000553823 PGPEP1Q9NXJ5 209 aa8.23□□□□□ -1.09
NEK9-202ENST00000553823 TRAV10A0A0B4J240 114 aa8.22□□□□□ -1.09
NEK9-202ENST00000553823 LINC00694P0DN24 101 aa8.22□□□□□ -1.09
NEK9-202ENST00000553823 S100A2P29034 98 aa8.22□□□□□ -1.09
NEK9-202ENST00000553823 FCER1GP30273 86 aa8.22□□□□□ -1.09
NEK9-202ENST00000553823 ORMDL2Q53FV1 153 aa8.22□□□□□ -1.09
NEK9-202ENST00000553823 FAM19A2Q8N3H0 131 aa8.22□□□□□ -1.09
NEK9-202ENST00000553823 IGHV1-24A0A0C4DH33 117 aa8.21□□□□□ -1.1
NEK9-202ENST00000553823 IGHV3-38A0A0C4DH36 116 aa8.21□□□□□ -1.1
NEK9-202ENST00000553823 H3BNG1 76 aa8.21□□□□□ -1.1
NEK9-202ENST00000553823 TSHBP01222 138 aa8.21□□□□□ -1.1
NEK9-202ENST00000553823 AMTP48728 403 aa8.21□□□□□ -1.1
NEK9-202ENST00000553823 COTL1Q14019 142 aa8.21□□□□□ -1.1
NEK9-202ENST00000553823 PMCHL1Q16048 86 aa8.21□□□□□ -1.1
NEK9-202ENST00000553823 DEFB104AQ8WTQ1 72 aa8.21□□□□□ -1.1
NEK9-202ENST00000553823 NUDT3O95989 172 aa8.2□□□□□ -1.1
NEK9-202ENST00000553823 MRPL23Q16540 153 aaKnown RBP8.2□□□□□ -1.1
NEK9-202ENST00000553823 ATP6V0E2Q8NHE4 81 aa8.2□□□□□ -1.1
NEK9-202ENST00000553823 TMEM18Q96B42 140 aa8.2□□□□□ -1.1
NEK9-202ENST00000553823 ICOSQ9Y6W8 199 aa8.2□□□□□ -1.1
NEK9-202ENST00000553823 FBN3Q75N90 2809 aa8.19□□□□□ -1.1
NEK9-202ENST00000553823 HBDP02042 147 aa8.19□□□□□ -1.1
NEK9-202ENST00000553823 G0S2P27469 103 aa8.19□□□□□ -1.1
NEK9-202ENST00000553823 SH2D6Q7Z4S9 175 aa8.19□□□□□ -1.1
NEK9-202ENST00000553823 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
NEK9-202ENST00000553823 HIST1H2BLQ99880 126 aa8.19□□□□□ -1.1
NEK9-202ENST00000553823 A0A096LNJ9 63 aa8.18□□□□□ -1.1
NEK9-202ENST00000553823 A0A096LPF7 62 aa8.18□□□□□ -1.1
NEK9-202ENST00000553823 IFITM10A6NMD0 228 aa8.18□□□□□ -1.1
NEK9-202ENST00000553823 FABP4P15090 132 aa8.18□□□□□ -1.1
NEK9-202ENST00000553823 BTF3P20290 206 aaKnown RBP8.18□□□□□ -1.1
NEK9-202ENST00000553823 TMEM97Q5BJF2 176 aa8.18□□□□□ -1.1
NEK9-202ENST00000553823 GTSF1LQ9H1H1 148 aa8.18□□□□□ -1.1
NEK9-202ENST00000553823 NTM-AS1Q6ZSK4 140 aa8.17□□□□□ -1.1
NEK9-202ENST00000553823 CYSLTR1Q9Y271 337 aa8.17□□□□□ -1.1
NEK9-202ENST00000553823 LINC01549A6NIU2 74 aa8.16□□□□□ -1.1
NEK9-202ENST00000553823 LEPROTL1O95214 131 aa8.16□□□□□ -1.1
NEK9-202ENST00000553823 C2orf66Q6UXQ4 117 aa8.16□□□□□ -1.1
NEK9-202ENST00000553823 C20orf203Q8NBC4 194 aa8.16□□□□□ -1.1
NEK9-202ENST00000553823 TOMM6Q96B49 74 aa8.16□□□□□ -1.1
NEK9-202ENST00000553823 CHCHD7Q9BUK0 85 aa8.16□□□□□ -1.1
NEK9-202ENST00000553823 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
NEK9-202ENST00000553823 TRBV6-8A0A0A6YYG3 113 aa8.15□□□□□ -1.1
NEK9-202ENST00000553823 C15orf53Q8NAA6 179 aa8.15□□□□□ -1.1
NEK9-202ENST00000553823 TMEM243Q9BU79 118 aa8.15□□□□□ -1.1
NEK9-202ENST00000553823 HSPB8Q9UJY1 196 aa8.15□□□□□ -1.1
NEK9-202ENST00000553823 LOC105371267A0A1B0GV96 52 aa8.14□□□□□ -1.11
NEK9-202ENST00000553823 RPL39P62891 51 aaKnown RBP8.14□□□□□ -1.11
NEK9-202ENST00000553823 OR10D4PQ8NGN7 298 aa8.14□□□□□ -1.11
NEK9-202ENST00000553823 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
NEK9-202ENST00000553823 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.13□□□□□ -1.11
NEK9-202ENST00000553823 IGKV2-29A2NJV5 120 aaPredicted RBP8.13□□□□□ -1.11
NEK9-202ENST00000553823 IGLL5B9A064 214 aa8.13□□□□□ -1.11
NEK9-202ENST00000553823 ATP5LO75964 103 aa8.13□□□□□ -1.11
NEK9-202ENST00000553823 TIRAPP58753 221 aa8.13□□□□□ -1.11
NEK9-202ENST00000553823 LINC00173Q6ZV60 143 aa8.13□□□□□ -1.11
NEK9-202ENST00000553823 ERASQ7Z444 233 aa8.13□□□□□ -1.11
NEK9-202ENST00000553823 IGIPA6NJ69 53 aa8.12□□□□□ -1.11
NEK9-202ENST00000553823 H7C423 109 aa8.12□□□□□ -1.11
NEK9-202ENST00000553823 UBE2L6O14933 153 aa8.12□□□□□ -1.11
NEK9-202ENST00000553823 LELP1Q5T871 98 aa8.12□□□□□ -1.11
NEK9-202ENST00000553823 CEMP1Q6PRD7 247 aaPredicted RBP8.12□□□□□ -1.11
NEK9-202ENST00000553823 LYPD5Q6UWN5 251 aa8.12□□□□□ -1.11
NEK9-202ENST00000553823 IFI27L1Q96BM0 104 aa8.12□□□□□ -1.11
NEK9-202ENST00000553823 CHCHD5Q9BSY4 110 aa8.12□□□□□ -1.11
NEK9-202ENST00000553823 TGP01266 2768 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 NUPR2A6NF83 97 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.11□□□□□ -1.11
NEK9-202ENST00000553823 AKR1D1P51857 326 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 SMAGPQ0VAQ4 97 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 TMEM141Q96I45 108 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 TIMM17AQ99595 171 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 TIMM21Q9BVV7 248 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 MAP1LC3CQ9BXW4 147 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 SPANXA1Q9NS26 97 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 UBE2D4Q9Y2X8 147 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
NEK9-202ENST00000553823 C3orf79P0CE67 100 aa8.1□□□□□ -1.11
NEK9-202ENST00000553823 FGF6P10767 208 aa8.1□□□□□ -1.11
NEK9-202ENST00000553823 KRTDAPP60985 99 aa8.1□□□□□ -1.11
NEK9-202ENST00000553823 GAGE6Q13070 117 aa8.1□□□□□ -1.11
NEK9-202ENST00000553823 Q6ZN92 141 aa8.1□□□□□ -1.11
NEK9-202ENST00000553823 MRPL52Q86TS9 123 aaKnown RBP8.1□□□□□ -1.11
NEK9-202ENST00000553823 KLK5Q9Y337 293 aaPredicted RBP8.1□□□□□ -1.11
NEK9-202ENST00000553823 DNAH7Q8WXX0 4024 aa8.1□□□□□ -1.11
NEK9-202ENST00000553823 NPSP0C0P6 89 aa8.09□□□□□ -1.11
NEK9-202ENST00000553823 ESRGQ1W209 222 aa8.09□□□□□ -1.11
NEK9-202ENST00000553823 AMMECR1LQ6DCA0 310 aa8.09□□□□□ -1.11
NEK9-202ENST00000553823 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
NEK9-202ENST00000553823 CSDC2Q9Y534 153 aaKnown RBP8.09□□□□□ -1.11
NEK9-202ENST00000553823 TRAV8-6A0A0B4J262 113 aa8.08□□□□□ -1.12
NEK9-202ENST00000553823 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
NEK9-202ENST00000553823 SYS1-DBNDD2H3BUS1 97 aa8.08□□□□□ -1.12
NEK9-202ENST00000553823 PRSS1P07477 247 aa8.08□□□□□ -1.12
NEK9-202ENST00000553823 ZNF25P17030 456 aaPredicted RBP8.08□□□□□ -1.12
NEK9-202ENST00000553823 PKIAP61925 76 aa8.08□□□□□ -1.12
NEK9-202ENST00000553823 PAPPA-AS1Q5QFB9 102 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms