RNA–Protein interactions for RNA: ENST00000549633.5

SLC38A1-207, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best)

Gene SLC38A1, Length 1,076 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-207ENST00000549633 PGLYRP4Q96LB8 373 aa12.93□□□□□ -0.34
SLC38A1-207ENST00000549633 MED28Q9H204 178 aa12.93□□□□□ -0.34
SLC38A1-207ENST00000549633 GVQW2A0A096LPI5 108 aaPredicted RBP12.92□□□□□ -0.34
SLC38A1-207ENST00000549633 S100A9P06702 114 aaKnown RBP12.92□□□□□ -0.34
SLC38A1-207ENST00000549633 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
SLC38A1-207ENST00000549633 Q6ZRP5 223 aa12.91□□□□□ -0.34
SLC38A1-207ENST00000549633 COTL1Q14019 142 aa12.9□□□□□ -0.34
SLC38A1-207ENST00000549633 FER1L6-AS1Q8NA97 138 aa12.9□□□□□ -0.34
SLC38A1-207ENST00000549633 NIT2Q9NQR4 276 aa12.9□□□□□ -0.34
SLC38A1-207ENST00000549633 CYTL1Q9NRR1 136 aa12.9□□□□□ -0.34
SLC38A1-207ENST00000549633 GIPP09681 153 aaPredicted RBP12.88□□□□□ -0.35
SLC38A1-207ENST00000549633 FOXI1Q12951 378 aa12.88□□□□□ -0.35
SLC38A1-207ENST00000549633 TMUB2Q71RG4 321 aa12.88□□□□□ -0.35
SLC38A1-207ENST00000549633 SFT2D1Q8WV19 159 aa12.87□□□□□ -0.35
SLC38A1-207ENST00000549633 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.86□□□□□ -0.35
SLC38A1-207ENST00000549633 IGKV2-29A2NJV5 120 aaPredicted RBP12.86□□□□□ -0.35
SLC38A1-207ENST00000549633 PFDN1O60925 122 aa12.86□□□□□ -0.35
SLC38A1-207ENST00000549633 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
SLC38A1-207ENST00000549633 LINC00474Q9P2X8 69 aa12.86□□□□□ -0.35
SLC38A1-207ENST00000549633 RPL35P42766 123 aaKnown RBP12.85□□□□□ -0.35
SLC38A1-207ENST00000549633 CACNG7P62955 275 aa12.85□□□□□ -0.35
SLC38A1-207ENST00000549633 AMMECR1LQ6DCA0 310 aa12.85□□□□□ -0.35
SLC38A1-207ENST00000549633 RNASEKQ6P5S7 137 aaKnown RBP12.85□□□□□ -0.35
SLC38A1-207ENST00000549633 Q6ZNX1 250 aa12.85□□□□□ -0.35
SLC38A1-207ENST00000549633 FAM213BQ8TBF2 198 aa12.85□□□□□ -0.35
SLC38A1-207ENST00000549633 CARD19Q96LW7 228 aa12.84□□□□□ -0.35
SLC38A1-207ENST00000549633 TRAV26-2A0A0B4J265 109 aa12.83□□□□□ -0.36
SLC38A1-207ENST00000549633 G3V3Q6 166 aa12.83□□□□□ -0.36
SLC38A1-207ENST00000549633 NTF3P20783 257 aa12.83□□□□□ -0.36
SLC38A1-207ENST00000549633 XCL1P47992 114 aa12.83□□□□□ -0.36
SLC38A1-207ENST00000549633 MBD3L1Q8WWY6 194 aa12.83□□□□□ -0.36
SLC38A1-207ENST00000549633 KRTAP9-2Q9BYQ4 174 aa12.83□□□□□ -0.36
SLC38A1-207ENST00000549633 MUC2Q02817 5179 aa12.83□□□□□ -0.36
SLC38A1-207ENST00000549633 ARPC5O15511 151 aa12.82□□□□□ -0.36
SLC38A1-207ENST00000549633 LYZL1Q6UWQ5 148 aa12.82□□□□□ -0.36
SLC38A1-207ENST00000549633 KCNRGQ8N5I3 272 aa12.82□□□□□ -0.36
SLC38A1-207ENST00000549633 FAM231BA6NCW3 169 aa12.81□□□□□ -0.36
SLC38A1-207ENST00000549633 TRGC1P0CF51 173 aa12.81□□□□□ -0.36
SLC38A1-207ENST00000549633 CENPWQ5EE01 88 aa12.81□□□□□ -0.36
SLC38A1-207ENST00000549633 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
SLC38A1-207ENST00000549633 A0A1W2PNN7 141 aa12.8□□□□□ -0.36
SLC38A1-207ENST00000549633 C19orf71A6NCJ1 209 aa12.8□□□□□ -0.36
SLC38A1-207ENST00000549633 FGF6P10767 208 aa12.8□□□□□ -0.36
SLC38A1-207ENST00000549633 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
SLC38A1-207ENST00000549633 RPL39LQ96EH5 51 aaKnown RBP12.8□□□□□ -0.36
SLC38A1-207ENST00000549633 CCL25O15444 150 aa12.79□□□□□ -0.36
SLC38A1-207ENST00000549633 GAGE2BQ13066 116 aa12.79□□□□□ -0.36
SLC38A1-207ENST00000549633 PSORS1C2Q9UIG4 136 aa12.79□□□□□ -0.36
SLC38A1-207ENST00000549633 IGHV1-58A0A0C4DH39 117 aa12.78□□□□□ -0.36
SLC38A1-207ENST00000549633 PTTG1IPP53801 180 aa12.78□□□□□ -0.36
SLC38A1-207ENST00000549633 SYCNQ0VAF6 134 aa12.78□□□□□ -0.36
SLC38A1-207ENST00000549633 PRR26Q8N8Z3 221 aa12.78□□□□□ -0.36
SLC38A1-207ENST00000549633 OR5A1Q8NGJ0 315 aa12.78□□□□□ -0.36
SLC38A1-207ENST00000549633 RAB19A4D1S5 217 aa12.77□□□□□ -0.37
SLC38A1-207ENST00000549633 F2Z2F3 143 aa12.77□□□□□ -0.37
SLC38A1-207ENST00000549633 PKIGQ9Y2B9 76 aa12.77□□□□□ -0.37
SLC38A1-207ENST00000549633 LINC00959A0A1B0GUT2 108 aa12.76□□□□□ -0.37
SLC38A1-207ENST00000549633 APCSP02743 223 aa12.76□□□□□ -0.37
SLC38A1-207ENST00000549633 IFNA1P01562 189 aa12.75□□□□□ -0.37
SLC38A1-207ENST00000549633 MT-ND6P03923 174 aa12.75□□□□□ -0.37
SLC38A1-207ENST00000549633 C11orf52Q96A22 123 aa12.75□□□□□ -0.37
SLC38A1-207ENST00000549633 ZNF561-AS1K7EIQ3 104 aa12.74□□□□□ -0.37
SLC38A1-207ENST00000549633 BCL2P10415 239 aa12.74□□□□□ -0.37
SLC38A1-207ENST00000549633 CCL20P78556 96 aa12.74□□□□□ -0.37
SLC38A1-207ENST00000549633 TWIST1Q15672 202 aa12.74□□□□□ -0.37
SLC38A1-207ENST00000549633 ZNF664Q8N3J9 261 aa12.74□□□□□ -0.37
SLC38A1-207ENST00000549633 LOC107984640A0A0U1RRK4 108 aa12.73□□□□□ -0.37
SLC38A1-207ENST00000549633 SMLR1H3BR10 107 aa12.73□□□□□ -0.37
SLC38A1-207ENST00000549633 H7C423 109 aa12.73□□□□□ -0.37
SLC38A1-207ENST00000549633 NCR2O95944 276 aa12.73□□□□□ -0.37
SLC38A1-207ENST00000549633 H2AFB1P0C5Y9 115 aa12.73□□□□□ -0.37
SLC38A1-207ENST00000549633 C1orf137Q5JT78 98 aa12.73□□□□□ -0.37
SLC38A1-207ENST00000549633 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-207ENST00000549633 XKRY2A2RUG3 117 aa12.72□□□□□ -0.37
SLC38A1-207ENST00000549633 CTRLP40313 264 aa12.72□□□□□ -0.37
SLC38A1-207ENST00000549633 CAMPP49913 170 aa12.72□□□□□ -0.37
SLC38A1-207ENST00000549633 FOXA3P55318 350 aaPredicted RBP12.72□□□□□ -0.37
SLC38A1-207ENST00000549633 GNG13Q9P2W3 67 aa12.72□□□□□ -0.37
SLC38A1-207ENST00000549633 IGLV4-69A0A075B6H9 119 aa12.71□□□□□ -0.37
SLC38A1-207ENST00000549633 SDHAF1A6NFY7 115 aa12.71□□□□□ -0.37
SLC38A1-207ENST00000549633 UMAD1C9J7I0 102 aa12.71□□□□□ -0.37
SLC38A1-207ENST00000549633 C9orf116Q5BN46 136 aaPredicted RBP12.71□□□□□ -0.37
SLC38A1-207ENST00000549633 C9orf62Q8N4C0 152 aa12.71□□□□□ -0.37
SLC38A1-207ENST00000549633 ZNF25P17030 456 aaPredicted RBP12.7□□□□□ -0.38
SLC38A1-207ENST00000549633 GNG4P50150 75 aa12.7□□□□□ -0.38
SLC38A1-207ENST00000549633 TMEM101Q96IK0 257 aa12.7□□□□□ -0.38
SLC38A1-207ENST00000549633 BTF3L4Q96K17 158 aa12.7□□□□□ -0.38
SLC38A1-207ENST00000549633 TRBV20OR9-2A0A075B6H5 130 aa12.69□□□□□ -0.38
SLC38A1-207ENST00000549633 SS18Q15532 418 aa12.68□□□□□ -0.38
SLC38A1-207ENST00000549633 CD164L2Q6UWJ8 174 aa12.68□□□□□ -0.38
SLC38A1-207ENST00000549633 NUP35Q8NFH5 326 aa12.68□□□□□ -0.38
SLC38A1-207ENST00000549633 NUDT10Q8NFP7 164 aa12.68□□□□□ -0.38
SLC38A1-207ENST00000549633 NUDT11Q96G61 164 aa12.68□□□□□ -0.38
SLC38A1-207ENST00000549633 MANBALQ9NQG1 85 aa12.68□□□□□ -0.38
SLC38A1-207ENST00000549633 PMCHP20382 165 aa12.67□□□□□ -0.38
SLC38A1-207ENST00000549633 CNFNQ9BYD5 112 aa12.67□□□□□ -0.38
SLC38A1-207ENST00000549633 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.66□□□□□ -0.38
SLC38A1-207ENST00000549633 MEF2BQ02080 365 aaPredicted RBP12.66□□□□□ -0.38
SLC38A1-207ENST00000549633 RPL18AQ02543 176 aaKnown RBP12.66□□□□□ -0.38
SLC38A1-207ENST00000549633 PRR4Q16378 134 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms