RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 LENEPQ9Y5L5 61 aa0.86□□□□□ -2.27
SNRPF-202ENST00000549580 DOCK1Q14185 1865 aa0.86□□□□□ -2.27
SNRPF-202ENST00000549580 ZNF462Q96JM2 2506 aa0.85□□□□□ -2.27
SNRPF-202ENST00000549580 ZNF469Q96JG9 3925 aaPredicted RBP0.85□□□□□ -2.27
SNRPF-202ENST00000549580 IFITM1P13164 125 aa0.85□□□□□ -2.27
SNRPF-202ENST00000549580 GCHFRP30047 84 aa0.85□□□□□ -2.27
SNRPF-202ENST00000549580 CCL18P55774 89 aa0.85□□□□□ -2.27
SNRPF-202ENST00000549580 ATP5EP56381 51 aaPredicted RBP0.85□□□□□ -2.27
SNRPF-202ENST00000549580 Q5VV11 94 aa0.85□□□□□ -2.27
SNRPF-202ENST00000549580 TCEAL7Q9BRU2 100 aa0.85□□□□□ -2.27
SNRPF-202ENST00000549580 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
SNRPF-202ENST00000549580 DOCK2Q92608 1830 aa0.85□□□□□ -2.27
SNRPF-202ENST00000549580 MAPKBP1O60336 1514 aa0.84□□□□□ -2.27
SNRPF-202ENST00000549580 F5P12259 2224 aa0.84□□□□□ -2.27
SNRPF-202ENST00000549580 SPAG11BQ08648 103 aa0.84□□□□□ -2.27
SNRPF-202ENST00000549580 SPAG11AQ6PDA7 123 aa0.84□□□□□ -2.27
SNRPF-202ENST00000549580 MGST2Q99735 147 aa0.84□□□□□ -2.27
SNRPF-202ENST00000549580 DPH3P1Q9H4G8 78 aa0.84□□□□□ -2.27
SNRPF-202ENST00000549580 PZPP20742 1482 aa0.84□□□□□ -2.28
SNRPF-202ENST00000549580 FBN2P35556 2912 aa0.84□□□□□ -2.28
SNRPF-202ENST00000549580 SSC5DA1L4H1 1573 aa0.83□□□□□ -2.28
SNRPF-202ENST00000549580 TRBV7-3A0A075B6L6 115 aa0.83□□□□□ -2.28
SNRPF-202ENST00000549580 ROBO1Q9Y6N7 1651 aa0.83□□□□□ -2.28
SNRPF-202ENST00000549580 NRKQ7Z2Y5 1582 aa0.83□□□□□ -2.28
SNRPF-202ENST00000549580 LAMC3Q9Y6N6 1575 aa0.83□□□□□ -2.28
SNRPF-202ENST00000549580 MRC1P22897 1456 aa0.82□□□□□ -2.28
SNRPF-202ENST00000549580 PRDM2Q13029 1718 aa0.82□□□□□ -2.28
SNRPF-202ENST00000549580 DCDP81605 110 aaKnown RBP0.82□□□□□ -2.28
SNRPF-202ENST00000549580 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
SNRPF-202ENST00000549580 TSLPQ969D9 159 aa0.82□□□□□ -2.28
SNRPF-202ENST00000549580 PROK2Q9HC23 129 aa0.82□□□□□ -2.28
SNRPF-202ENST00000549580 DYNLRB1Q9NP97 96 aa0.82□□□□□ -2.28
SNRPF-202ENST00000549580 V9GYH0 126 aa0.82□□□□□ -2.28
SNRPF-202ENST00000549580 ZMYM4Q5VZL5 1548 aa0.82□□□□□ -2.28
SNRPF-202ENST00000549580 DOCK11Q5JSL3 2073 aa0.81□□□□□ -2.28
SNRPF-202ENST00000549580 M0R135 149 aa0.81□□□□□ -2.28
SNRPF-202ENST00000549580 C12orf57Q99622 126 aa0.81□□□□□ -2.28
SNRPF-202ENST00000549580 PLAC8Q9NZF1 115 aa0.81□□□□□ -2.28
SNRPF-202ENST00000549580 LINC00474Q9P2X8 69 aa0.81□□□□□ -2.28
SNRPF-202ENST00000549580 IFT172Q9UG01 1749 aa0.81□□□□□ -2.28
SNRPF-202ENST00000549580 GOLGA3Q08378 1498 aa0.8□□□□□ -2.28
SNRPF-202ENST00000549580 CTXND1A0A1B0GTU2 59 aa0.8□□□□□ -2.28
SNRPF-202ENST00000549580 SPINK8P0C7L1 97 aa0.8□□□□□ -2.28
SNRPF-202ENST00000549580 HSD52Q0P140 79 aa0.8□□□□□ -2.28
SNRPF-202ENST00000549580 CFAP126Q5VTH2 177 aa0.8□□□□□ -2.28
SNRPF-202ENST00000549580 SMIM4Q8WVI0 70 aa0.8□□□□□ -2.28
SNRPF-202ENST00000549580 NDUFA4L2Q9NRX3 87 aa0.8□□□□□ -2.28
SNRPF-202ENST00000549580 C10orf71Q711Q0 1435 aa0.8□□□□□ -2.28
SNRPF-202ENST00000549580 PI4KAP42356 2102 aa0.79□□□□□ -2.28
SNRPF-202ENST00000549580 LOC285095A0A1B0GVY8 99 aa0.79□□□□□ -2.28
SNRPF-202ENST00000549580 NMBP08949 121 aa0.79□□□□□ -2.28
SNRPF-202ENST00000549580 GNG11P61952 73 aa0.79□□□□□ -2.28
SNRPF-202ENST00000549580 C14orf144Q96I85 54 aa0.79□□□□□ -2.28
SNRPF-202ENST00000549580 NPVFQ9HCQ7 196 aa0.79□□□□□ -2.28
SNRPF-202ENST00000549580 ATP6V1G2-DDX39BF2Z307 99 aa0.78□□□□□ -2.28
SNRPF-202ENST00000549580 G3V318 75 aa0.78□□□□□ -2.28
SNRPF-202ENST00000549580 H3BQ15 152 aa0.78□□□□□ -2.28
SNRPF-202ENST00000549580 PIN1P1O15428 100 aa0.78□□□□□ -2.28
SNRPF-202ENST00000549580 SCAPERQ9BY12 1400 aa0.78□□□□□ -2.28
SNRPF-202ENST00000549580 ASH1LQ9NR48 2969 aaKnown RBP0.77□□□□□ -2.29
SNRPF-202ENST00000549580 F8VRH5 84 aa0.77□□□□□ -2.29
SNRPF-202ENST00000549580 BAGE2Q86Y30 109 aa0.77□□□□□ -2.29
SNRPF-202ENST00000549580 UBE2DNLQ8IWF7 75 aa0.77□□□□□ -2.29
SNRPF-202ENST00000549580 UQCR10Q9UDW1 63 aa0.77□□□□□ -2.29
SNRPF-202ENST00000549580 PSME4Q14997 1843 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 SHROOM2Q13796 1616 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 TMEM218A2RU14 115 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 TMEM262E9PQX1 116 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 CHKB-CPT1BH3BT56 60 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 HMGN4O00479 90 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 RBP2P50120 134 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 TMEM170BQ5T4T1 132 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 AMELXQ99217 191 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 TCHHQ07283 1943 aa0.76□□□□□ -2.29
SNRPF-202ENST00000549580 UNC13BO14795 1591 aa0.75□□□□□ -2.29
SNRPF-202ENST00000549580 NAP1L6A6NFF2 107 aa0.75□□□□□ -2.29
SNRPF-202ENST00000549580 UQCR11O14957 56 aa0.75□□□□□ -2.29
SNRPF-202ENST00000549580 APOC3P02656 99 aa0.75□□□□□ -2.29
SNRPF-202ENST00000549580 SNCAP37840 140 aa0.75□□□□□ -2.29
SNRPF-202ENST00000549580 COX17Q14061 63 aa0.75□□□□□ -2.29
SNRPF-202ENST00000549580 ARHGAP5Q13017 1502 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 KCPQ6ZWJ8 1503 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 ZFYVE16Q7Z3T8 1539 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 ZNF609O15014 1411 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 NAV3Q8IVL0 2385 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 IGLC7A0M8Q6 106 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 COX6A2Q02221 97 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 FAM167A-AS1Q96KT0 104 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 SPHKAPQ2M3C7 1700 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 JMJD1CQ15652 2540 aa0.74□□□□□ -2.29
SNRPF-202ENST00000549580 TRAV30A0A087WSZ9 112 aa0.73□□□□□ -2.29
SNRPF-202ENST00000549580 KRTDAPP60985 99 aa0.73□□□□□ -2.29
SNRPF-202ENST00000549580 FAM213BQ8TBF2 198 aa0.73□□□□□ -2.29
SNRPF-202ENST00000549580 MANBALQ9NQG1 85 aa0.73□□□□□ -2.29
SNRPF-202ENST00000549580 LINC01558Q9Y6Z2 57 aa0.73□□□□□ -2.29
SNRPF-202ENST00000549580 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
SNRPF-202ENST00000549580 CADP27708 2225 aa0.72□□□□□ -2.29
SNRPF-202ENST00000549580 SFT2D2O95562 160 aa0.72□□□□□ -2.29
SNRPF-202ENST00000549580 Q0VG73 95 aa0.72□□□□□ -2.29
SNRPF-202ENST00000549580 SSBP3-AS1Q7Z2R9 100 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms