RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 C20orf203Q8NBC4 194 aa12.14□□□□□ -0.47
CHMP1A-203ENST00000547614 CHAC1Q9BUX1 264 aa12.14□□□□□ -0.47
CHMP1A-203ENST00000547614 EIF5A2Q9GZV4 153 aaKnown RBP12.14□□□□□ -0.47
CHMP1A-203ENST00000547614 DNAH8Q96JB1 4490 aa12.13□□□□□ -0.47
CHMP1A-203ENST00000547614 PLA2G1BP04054 148 aaKnown RBP12.13□□□□□ -0.47
CHMP1A-203ENST00000547614 DGAT2L7PQ6IED9 249 aa12.13□□□□□ -0.47
CHMP1A-203ENST00000547614 FLG2Q5D862 2391 aaPredicted RBP12.12□□□□□ -0.47
CHMP1A-203ENST00000547614 AMTP48728 403 aa12.12□□□□□ -0.47
CHMP1A-203ENST00000547614 CEBPGP53567 150 aa12.12□□□□□ -0.47
CHMP1A-203ENST00000547614 SCXQ7RTU7 201 aa12.12□□□□□ -0.47
CHMP1A-203ENST00000547614 FAM210AQ96ND0 272 aa12.12□□□□□ -0.47
CHMP1A-203ENST00000547614 SMIM7Q9BQ49 75 aa12.12□□□□□ -0.47
CHMP1A-203ENST00000547614 IGLV4-60A0A075B6I1 120 aa12.11□□□□□ -0.47
CHMP1A-203ENST00000547614 TRAV26-2A0A0B4J265 109 aa12.11□□□□□ -0.47
CHMP1A-203ENST00000547614 UBE2L6O14933 153 aa12.11□□□□□ -0.47
CHMP1A-203ENST00000547614 PRSS1P07477 247 aa12.11□□□□□ -0.47
CHMP1A-203ENST00000547614 LINC00528Q8N1L1 170 aa12.11□□□□□ -0.47
CHMP1A-203ENST00000547614 DMBT1Q9UGM3 2413 aaPredicted RBP12.11□□□□□ -0.47
CHMP1A-203ENST00000547614 LINC01551Q86U37 167 aa12.1□□□□□ -0.47
CHMP1A-203ENST00000547614 CLRN3Q8NCR9 226 aa12.1□□□□□ -0.47
CHMP1A-203ENST00000547614 VPS13BQ7Z7G8 4022 aa12.09□□□□□ -0.47
CHMP1A-203ENST00000547614 NCR2O95944 276 aa12.09□□□□□ -0.47
CHMP1A-203ENST00000547614 CIRBP-AS1Q8TBR5 109 aa12.09□□□□□ -0.47
CHMP1A-203ENST00000547614 DEFB104AQ8WTQ1 72 aa12.09□□□□□ -0.47
CHMP1A-203ENST00000547614 IGLV10-54A0A075B6I4 117 aa12.08□□□□□ -0.48
CHMP1A-203ENST00000547614 FAM231BA6NCW3 169 aa12.08□□□□□ -0.48
CHMP1A-203ENST00000547614 ZNF727A8MUV8 499 aa12.08□□□□□ -0.48
CHMP1A-203ENST00000547614 C9orf163Q8N9P6 203 aa12.08□□□□□ -0.48
CHMP1A-203ENST00000547614 TSKUQ8WUA8 353 aa12.08□□□□□ -0.48
CHMP1A-203ENST00000547614 BORCS7Q96B45 105 aa12.08□□□□□ -0.48
CHMP1A-203ENST00000547614 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
CHMP1A-203ENST00000547614 GFRA4Q9GZZ7 299 aa12.08□□□□□ -0.48
CHMP1A-203ENST00000547614 OSTCQ9NRP0 149 aa12.08□□□□□ -0.48
CHMP1A-203ENST00000547614 SRP19P09132 144 aaKnown RBP12.07□□□□□ -0.48
CHMP1A-203ENST00000547614 A0A1B0GUT8 65 aa12.06□□□□□ -0.48
CHMP1A-203ENST00000547614 A0A1B0GVG6 124 aa12.06□□□□□ -0.48
CHMP1A-203ENST00000547614 SDHAF1A6NFY7 115 aa12.06□□□□□ -0.48
CHMP1A-203ENST00000547614 H7C423 109 aa12.06□□□□□ -0.48
CHMP1A-203ENST00000547614 TRBV6-5A0A0K0K1A5 114 aa12.05□□□□□ -0.48
CHMP1A-203ENST00000547614 HIGD1CA8MV81 97 aa12.05□□□□□ -0.48
CHMP1A-203ENST00000547614 TMEM191AQ9H0A3 160 aa12.04□□□□□ -0.48
CHMP1A-203ENST00000547614 MYCBP2O75592 4640 aa12.03□□□□□ -0.48
CHMP1A-203ENST00000547614 I3L3M4 83 aa12.03□□□□□ -0.48
CHMP1A-203ENST00000547614 APCSP02743 223 aa12.03□□□□□ -0.48
CHMP1A-203ENST00000547614 CNBPP62633 177 aaKnown RBP12.03□□□□□ -0.48
CHMP1A-203ENST00000547614 FAM74A3Q4VXF1 159 aa12.03□□□□□ -0.48
CHMP1A-203ENST00000547614 AMMECR1LQ6DCA0 310 aa12.03□□□□□ -0.48
CHMP1A-203ENST00000547614 PMCHP20382 165 aa12.02□□□□□ -0.49
CHMP1A-203ENST00000547614 TMEM241Q24JQ0 296 aa12.02□□□□□ -0.49
CHMP1A-203ENST00000547614 SDIM1Q6ZPB5 146 aa12.02□□□□□ -0.49
CHMP1A-203ENST00000547614 hDV102S1A0JD36 115 aa12.01□□□□□ -0.49
CHMP1A-203ENST00000547614 ST20Q9HBF5 79 aa12.01□□□□□ -0.49
CHMP1A-203ENST00000547614 V9GYV3 84 aa12.01□□□□□ -0.49
CHMP1A-203ENST00000547614 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12□□□□□ -0.49
CHMP1A-203ENST00000547614 IGKV2-29A2NJV5 120 aaPredicted RBP12□□□□□ -0.49
CHMP1A-203ENST00000547614 FGF6P10767 208 aa12□□□□□ -0.49
CHMP1A-203ENST00000547614 ZNF25P17030 456 aaPredicted RBP12□□□□□ -0.49
CHMP1A-203ENST00000547614 RAB4AP20338 218 aa12□□□□□ -0.49
CHMP1A-203ENST00000547614 RNASEKQ6P5S7 137 aaKnown RBP12□□□□□ -0.49
CHMP1A-203ENST00000547614 CFAP161Q6P656 301 aa12□□□□□ -0.49
CHMP1A-203ENST00000547614 ISOC2Q96AB3 205 aa12□□□□□ -0.49
CHMP1A-203ENST00000547614 MRAP2Q96G30 205 aa12□□□□□ -0.49
CHMP1A-203ENST00000547614 AP5S1Q9NUS5 200 aa12□□□□□ -0.49
CHMP1A-203ENST00000547614 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.99□□□□□ -0.49
CHMP1A-203ENST00000547614 POLR2KP53803 58 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-203ENST00000547614 KRTAP10-4P60372 401 aaPredicted RBP11.99□□□□□ -0.49
CHMP1A-203ENST00000547614 RIGQ13278 110 aa11.99□□□□□ -0.49
CHMP1A-203ENST00000547614 RNF185Q96GF1 192 aa11.99□□□□□ -0.49
CHMP1A-203ENST00000547614 GAGE12HA6NDE8 117 aa11.98□□□□□ -0.49
CHMP1A-203ENST00000547614 GAS8-AS1O95177 125 aa11.98□□□□□ -0.49
CHMP1A-203ENST00000547614 ESDP10768 282 aa11.98□□□□□ -0.49
CHMP1A-203ENST00000547614 RPL23P62829 140 aaKnown RBP11.98□□□□□ -0.49
CHMP1A-203ENST00000547614 NUP35Q8NFH5 326 aa11.98□□□□□ -0.49
CHMP1A-203ENST00000547614 SMDT1Q9H4I9 107 aa11.98□□□□□ -0.49
CHMP1A-203ENST00000547614 HERC1Q15751 4861 aa11.98□□□□□ -0.49
CHMP1A-203ENST00000547614 IGKV3OR2-268A0A0C4DH90 116 aa11.97□□□□□ -0.49
CHMP1A-203ENST00000547614 TRBV27A0A0K0K1C4 114 aa11.97□□□□□ -0.49
CHMP1A-203ENST00000547614 TSHBP01222 138 aa11.97□□□□□ -0.49
CHMP1A-203ENST00000547614 AMN1Q8IY45 258 aa11.97□□□□□ -0.49
CHMP1A-203ENST00000547614 CHCHD10Q8WYQ3 142 aaPredicted RBP11.97□□□□□ -0.49
CHMP1A-203ENST00000547614 BTF3L4Q96K17 158 aa11.97□□□□□ -0.49
CHMP1A-203ENST00000547614 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
CHMP1A-203ENST00000547614 NAT8BQ9UHF3 227 aa11.97□□□□□ -0.49
CHMP1A-203ENST00000547614 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.97□□□□□ -0.49
CHMP1A-203ENST00000547614 C9JQL5 133 aa11.96□□□□□ -0.49
CHMP1A-203ENST00000547614 PPP1R17O96001 155 aa11.96□□□□□ -0.49
CHMP1A-203ENST00000547614 SLPIP03973 132 aa11.96□□□□□ -0.49
CHMP1A-203ENST00000547614 PEA15Q15121 130 aa11.96□□□□□ -0.49
CHMP1A-203ENST00000547614 OR5A1Q8NGJ0 315 aa11.96□□□□□ -0.49
CHMP1A-203ENST00000547614 TMEM101Q96IK0 257 aa11.96□□□□□ -0.49
CHMP1A-203ENST00000547614 IGHV3-64A0A075B6Q5 118 aa11.95□□□□□ -0.5
CHMP1A-203ENST00000547614 KRTAP29-1A8MX34 341 aaPredicted RBP11.95□□□□□ -0.5
CHMP1A-203ENST00000547614 J3QL48 77 aa11.95□□□□□ -0.5
CHMP1A-203ENST00000547614 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
CHMP1A-203ENST00000547614 CIRBPQ14011 172 aaKnown RBP11.95□□□□□ -0.5
CHMP1A-203ENST00000547614 C15orf56Q8N910 161 aa11.95□□□□□ -0.5
CHMP1A-203ENST00000547614 TMEM242Q9NWH2 141 aa11.95□□□□□ -0.5
CHMP1A-203ENST00000547614 ADIRFQ15847 76 aa11.94□□□□□ -0.5
CHMP1A-203ENST00000547614 MRPL52Q86TS9 123 aaKnown RBP11.94□□□□□ -0.5
CHMP1A-203ENST00000547614 SMIM27A0A1W2PRY6 76 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms