RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 F2Z2F3 143 aa11.88□□□□□ -0.51
CHERP-204ENST00000546538 SERTAD4-AS1Q5TG53 156 aa11.88□□□□□ -0.51
CHERP-204ENST00000546538 CLRN3Q8NCR9 226 aa11.88□□□□□ -0.51
CHERP-204ENST00000546538 NUDT10Q8NFP7 164 aa11.88□□□□□ -0.51
CHERP-204ENST00000546538 NUDT11Q96G61 164 aa11.88□□□□□ -0.51
CHERP-204ENST00000546538 DPH3P1Q9H4G8 78 aa11.88□□□□□ -0.51
CHERP-204ENST00000546538 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
CHERP-204ENST00000546538 hDV102S1A0JD36 115 aa11.87□□□□□ -0.51
CHERP-204ENST00000546538 K7EN84 100 aa11.87□□□□□ -0.51
CHERP-204ENST00000546538 PDE6DO43924 150 aa11.87□□□□□ -0.51
CHERP-204ENST00000546538 IFNA1P01562 189 aa11.87□□□□□ -0.51
CHERP-204ENST00000546538 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
CHERP-204ENST00000546538 MT1HL1P0DM35 61 aa11.87□□□□□ -0.51
CHERP-204ENST00000546538 BCL2P10415 239 aa11.87□□□□□ -0.51
CHERP-204ENST00000546538 CNFNQ9BYD5 112 aa11.87□□□□□ -0.51
CHERP-204ENST00000546538 TRAV8-4A0A0B4J246 113 aa11.86□□□□□ -0.51
CHERP-204ENST00000546538 TRAV26-2A0A0B4J265 109 aa11.86□□□□□ -0.51
CHERP-204ENST00000546538 GATD1Q8NB37 220 aa11.86□□□□□ -0.51
CHERP-204ENST00000546538 TRGC1P0CF51 173 aa11.86□□□□□ -0.51
CHERP-204ENST00000546538 C15orf56Q8N910 161 aa11.86□□□□□ -0.51
CHERP-204ENST00000546538 RNASE7Q9H1E1 156 aaKnown RBP11.86□□□□□ -0.51
CHERP-204ENST00000546538 FOXA3P55318 350 aaPredicted RBP11.85□□□□□ -0.51
CHERP-204ENST00000546538 WDR73Q6P4I2 378 aa11.85□□□□□ -0.51
CHERP-204ENST00000546538 GTSF1Q8WW33 167 aa11.85□□□□□ -0.51
CHERP-204ENST00000546538 XKRY2A2RUG3 117 aa11.84□□□□□ -0.51
CHERP-204ENST00000546538 AMTP48728 403 aa11.84□□□□□ -0.51
CHERP-204ENST00000546538 RPL39LQ96EH5 51 aaKnown RBP11.84□□□□□ -0.51
CHERP-204ENST00000546538 OCC1Q8TAD7 63 aa11.83□□□□□ -0.52
CHERP-204ENST00000546538 SPACA4Q8TDM5 124 aa11.83□□□□□ -0.52
CHERP-204ENST00000546538 A0A087WYN8 130 aa11.82□□□□□ -0.52
CHERP-204ENST00000546538 TEX46H3BTG2 121 aa11.82□□□□□ -0.52
CHERP-204ENST00000546538 COTL1Q14019 142 aa11.82□□□□□ -0.52
CHERP-204ENST00000546538 TWIST1Q15672 202 aa11.82□□□□□ -0.52
CHERP-204ENST00000546538 EIF5AL1Q6IS14 154 aaKnown RBP11.82□□□□□ -0.52
CHERP-204ENST00000546538 RPP21Q9H633 154 aaKnown RBP11.82□□□□□ -0.52
CHERP-204ENST00000546538 GAGE12HA6NDE8 117 aa11.81□□□□□ -0.52
CHERP-204ENST00000546538 IGHV3-64A0A075B6Q5 118 aa11.8□□□□□ -0.52
CHERP-204ENST00000546538 PLA2G2DQ9UNK4 145 aa11.8□□□□□ -0.52
CHERP-204ENST00000546538 UBE2L6O14933 153 aa11.79□□□□□ -0.52
CHERP-204ENST00000546538 BIN3Q9NQY0 253 aa11.79□□□□□ -0.52
CHERP-204ENST00000546538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.78□□□□□ -0.52
CHERP-204ENST00000546538 IGKV3OR2-268A0A0C4DH90 116 aa11.78□□□□□ -0.52
CHERP-204ENST00000546538 IGKV2-29A2NJV5 120 aaPredicted RBP11.78□□□□□ -0.52
CHERP-204ENST00000546538 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
CHERP-204ENST00000546538 SLC51BQ86UW2 128 aa11.78□□□□□ -0.52
CHERP-204ENST00000546538 PLAC8Q9NZF1 115 aa11.78□□□□□ -0.52
CHERP-204ENST00000546538 HIGD2BQ4VC39 106 aa11.77□□□□□ -0.52
CHERP-204ENST00000546538 AP5S1Q9NUS5 200 aa11.77□□□□□ -0.52
CHERP-204ENST00000546538 FAM231BA6NCW3 169 aa11.77□□□□□ -0.53
CHERP-204ENST00000546538 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.53
CHERP-204ENST00000546538 CHCHD10Q8WYQ3 142 aaPredicted RBP11.77□□□□□ -0.53
CHERP-204ENST00000546538 RNF185Q96GF1 192 aa11.77□□□□□ -0.53
CHERP-204ENST00000546538 LRP2P98164 4655 aa11.76□□□□□ -0.53
CHERP-204ENST00000546538 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.76□□□□□ -0.53
CHERP-204ENST00000546538 COX6A2Q02221 97 aa11.76□□□□□ -0.53
CHERP-204ENST00000546538 Q6ZRU5 148 aa11.76□□□□□ -0.53
CHERP-204ENST00000546538 SDHAF1A6NFY7 115 aa11.75□□□□□ -0.53
CHERP-204ENST00000546538 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
CHERP-204ENST00000546538 PHOX2AO14813 284 aa11.74□□□□□ -0.53
CHERP-204ENST00000546538 FGF6P10767 208 aa11.74□□□□□ -0.53
CHERP-204ENST00000546538 FOXI1Q12951 378 aa11.74□□□□□ -0.53
CHERP-204ENST00000546538 NCR2O95944 276 aa11.73□□□□□ -0.53
CHERP-204ENST00000546538 TAGLN2P37802 199 aaKnown RBP11.73□□□□□ -0.53
CHERP-204ENST00000546538 RPS10P46783 165 aaKnown RBP11.73□□□□□ -0.53
CHERP-204ENST00000546538 APCSP02743 223 aa11.72□□□□□ -0.53
CHERP-204ENST00000546538 RNASEKQ6P5S7 137 aaKnown RBP11.72□□□□□ -0.53
CHERP-204ENST00000546538 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
CHERP-204ENST00000546538 TRBV6-5A0A0K0K1A5 114 aa11.71□□□□□ -0.53
CHERP-204ENST00000546538 TSHBP01222 138 aa11.71□□□□□ -0.53
CHERP-204ENST00000546538 ESDP10768 282 aa11.71□□□□□ -0.53
CHERP-204ENST00000546538 AMMECR1LQ6DCA0 310 aa11.71□□□□□ -0.53
CHERP-204ENST00000546538 FAM231DQ6ZW35 169 aa11.71□□□□□ -0.53
CHERP-204ENST00000546538 LYPD6BQ8NI32 183 aa11.71□□□□□ -0.53
CHERP-204ENST00000546538 IGKV2-24A0A0C4DH68 120 aa11.7□□□□□ -0.54
CHERP-204ENST00000546538 TMEM250H0YL14 139 aa11.7□□□□□ -0.54
CHERP-204ENST00000546538 H7C423 109 aa11.7□□□□□ -0.54
CHERP-204ENST00000546538 GATCO43716 136 aaKnown RBP11.7□□□□□ -0.54
CHERP-204ENST00000546538 NDUFS6O75380 124 aaKnown RBP11.7□□□□□ -0.54
CHERP-204ENST00000546538 CFAP161Q6P656 301 aa11.7□□□□□ -0.54
CHERP-204ENST00000546538 LINC00526Q96FQ7 95 aa11.7□□□□□ -0.54
CHERP-204ENST00000546538 A0A096LNI7 61 aa11.69□□□□□ -0.54
CHERP-204ENST00000546538 ALKAL2Q6UX46 152 aa11.69□□□□□ -0.54
CHERP-204ENST00000546538 I3L3M4 83 aa11.69□□□□□ -0.54
CHERP-204ENST00000546538 ODF1Q14990 250 aa11.69□□□□□ -0.54
CHERP-204ENST00000546538 MAJINQ3KP22 176 aa11.69□□□□□ -0.54
CHERP-204ENST00000546538 OR5A1Q8NGJ0 315 aa11.69□□□□□ -0.54
CHERP-204ENST00000546538 TMEM242Q9NWH2 141 aa11.69□□□□□ -0.54
CHERP-204ENST00000546538 LINC00959A0A1B0GUT2 108 aa11.68□□□□□ -0.54
CHERP-204ENST00000546538 XCL1P47992 114 aa11.68□□□□□ -0.54
CHERP-204ENST00000546538 TEX261Q6UWH6 196 aa11.68□□□□□ -0.54
CHERP-204ENST00000546538 A8MWL6 223 aa11.67□□□□□ -0.54
CHERP-204ENST00000546538 ZNF25P17030 456 aaPredicted RBP11.67□□□□□ -0.54
CHERP-204ENST00000546538 PRR3P79522 188 aaKnown RBP11.67□□□□□ -0.54
CHERP-204ENST00000546538 CT83Q5H943 113 aa11.67□□□□□ -0.54
CHERP-204ENST00000546538 SMIM15Q7Z3B0 74 aa11.67□□□□□ -0.54
CHERP-204ENST00000546538 CCL25O15444 150 aa11.66□□□□□ -0.54
CHERP-204ENST00000546538 PMCHP20382 165 aa11.66□□□□□ -0.54
CHERP-204ENST00000546538 POLR2KP53803 58 aaKnown RBP11.66□□□□□ -0.54
CHERP-204ENST00000546538 STPG4Q8N801 248 aa11.66□□□□□ -0.54
CHERP-204ENST00000546538 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms