RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 RPL36ALQ969Q0 106 aaKnown RBP4.37□□□□□ -1.71
PRKDC-211ENST00000546304 BTF3L4Q96K17 158 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 TMEM242Q9NWH2 141 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 URGCP-MRPS24S4R325 110 aa4.37□□□□□ -1.71
PRKDC-211ENST00000546304 DNAH17Q9UFH2 4485 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 TRAV9-1A0A075B6T8 112 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 M0QY20 66 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 LY6G6CO95867 125 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 CCL18P55774 89 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 LGALS9CQ6DKI2 356 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 RASL11AQ6T310 242 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 GATD1Q8NB37 220 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 NEXN-AS1Q8NBZ9 246 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 Q9UF83 564 aa4.36□□□□□ -1.71
PRKDC-211ENST00000546304 MRPS16Q9Y3D3 137 aaKnown RBP4.36□□□□□ -1.71
PRKDC-211ENST00000546304 FAT2Q9NYQ8 4349 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 TRBV7-3A0A075B6L6 115 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 NCR2O95944 276 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 TIRAPP58753 221 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 UBE2D3P61077 147 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 UBE2D2P62837 147 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 FAM104BQ5XKR9 115 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 ATRAIDQ6UW56 229 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 ATP6V0E2Q8NHE4 81 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 ZNRF2Q8NHG8 242 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 FRZBQ92765 325 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
PRKDC-211ENST00000546304 MRAP2Q96G30 205 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 RNF185Q96GF1 192 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 LINC00588Q9Y4M8 146 aa4.35□□□□□ -1.71
PRKDC-211ENST00000546304 SMKR1H3BMG3 65 aa4.34□□□□□ -1.71
PRKDC-211ENST00000546304 RAB4AP20338 218 aa4.34□□□□□ -1.71
PRKDC-211ENST00000546304 RPS10P46783 165 aaKnown RBP4.34□□□□□ -1.71
PRKDC-211ENST00000546304 ESRGQ1W209 222 aa4.34□□□□□ -1.71
PRKDC-211ENST00000546304 MRPL51Q4U2R6 128 aaKnown RBP4.34□□□□□ -1.71
PRKDC-211ENST00000546304 OR10J3Q5JRS4 329 aa4.34□□□□□ -1.71
PRKDC-211ENST00000546304 DAZ4Q86SG3 579 aaKnown RBP4.34□□□□□ -1.71
PRKDC-211ENST00000546304 CBLN2Q8IUK8 224 aa4.34□□□□□ -1.71
PRKDC-211ENST00000546304 DNAJC30Q96LL9 226 aa4.34□□□□□ -1.71
PRKDC-211ENST00000546304 UPK3BQ9BT76 320 aa4.34□□□□□ -1.71
PRKDC-211ENST00000546304 GTSF1LQ9H1H1 148 aa4.34□□□□□ -1.71
PRKDC-211ENST00000546304 NIT2Q9NQR4 276 aa4.34□□□□□ -1.71
PRKDC-211ENST00000546304 DAZ3Q9NR90 486 aaKnown RBP4.34□□□□□ -1.71
PRKDC-211ENST00000546304 IGHV3-38A0A0C4DH36 116 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 TRBV6-5A0A0K0K1A5 114 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 D6R8Y8 96 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 GAS8-AS1O95177 125 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 HLA-DQA1P01909 254 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 LELP1Q5T871 98 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 LYPD5Q6UWN5 251 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 TMEM136Q6ZRR5 245 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 WFDC10BQ8IUB3 73 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 NRACQ8N912 160 aa4.33□□□□□ -1.72
PRKDC-211ENST00000546304 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.33□□□□□ -1.72
PRKDC-211ENST00000546304 TRBV24-1A0A075B6N3 115 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 TGIF2-C20orf24A0A0A6YYL0 155 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 TRAV8-6A0A0B4J262 113 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 SDHAF1A6NFY7 115 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 H0Y8G0 127 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 ATP6V1G1O75348 118 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 PPP1R17O96001 155 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 PPBPP02775 128 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 MT-ND6P03923 174 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 CKS2P33552 79 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 ELOBQ15370 118 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 COX19Q49B96 90 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 TMEM97Q5BJF2 176 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 ORMDL3Q8N138 153 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 YPEL4Q96NS1 127 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 TMEM70Q9BUB7 260 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 SMCO4Q9NRQ5 59 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 DNAH11Q96DT5 4516 aa4.32□□□□□ -1.72
PRKDC-211ENST00000546304 IGLV2-18A0A075B6J9 118 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 TRBV25-1A0A075B6N4 114 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 PHOX2AO14813 284 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 SIVA1O15304 175 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 NPYP01303 97 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 APCSP02743 223 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 DNAH10OSP0CZ25 163 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 SUMO2P61956 95 aaKnown RBP4.31□□□□□ -1.72
PRKDC-211ENST00000546304 COTL1Q14019 142 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 TTC32Q5I0X7 151 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 PRELID3AQ96N28 172 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 SMIM2Q9BVW6 85 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 GNB1LQ9BYB4 327 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
PRKDC-211ENST00000546304 IGHV1-24A0A0C4DH33 117 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 TRBV27A0A0K0K1C4 114 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 NBDYA0A0U1RRE5 68 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 USP17L23D6RBM5 183 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 TSHBP01222 138 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 AMTP48728 403 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 RPL32P62910 135 aaKnown RBP4.3□□□□□ -1.72
PRKDC-211ENST00000546304 IQCJQ1A5X6 159 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 LINC01556Q5JQF7 62 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 NTM-AS1Q6ZSK4 140 aa4.3□□□□□ -1.72
PRKDC-211ENST00000546304 Q8N9P0 234 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms