RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 C10orf126Q8N4M7 172 aa14.05□□□□□ -0.16
SCARB1-211ENST00000546215 CHCHD5Q9BSY4 110 aa14.05□□□□□ -0.16
SCARB1-211ENST00000546215 RTL8CO15255 209 aa14.04□□□□□ -0.16
SCARB1-211ENST00000546215 BTF3P20290 206 aaKnown RBP14.04□□□□□ -0.16
SCARB1-211ENST00000546215 ELOBQ15370 118 aa14.04□□□□□ -0.16
SCARB1-211ENST00000546215 C20orf78Q9BR46 151 aa14.04□□□□□ -0.16
SCARB1-211ENST00000546215 TMEM262E9PQX1 116 aa14.03□□□□□ -0.16
SCARB1-211ENST00000546215 CHCHD7Q9BUK0 85 aa14.03□□□□□ -0.16
SCARB1-211ENST00000546215 A0A087WX48 190 aa14.02□□□□□ -0.16
SCARB1-211ENST00000546215 IBA57-AS1B1ANH7 110 aa14.02□□□□□ -0.16
SCARB1-211ENST00000546215 VCYO14598 125 aa14.02□□□□□ -0.16
SCARB1-211ENST00000546215 PHOX2AO14813 284 aa14.02□□□□□ -0.16
SCARB1-211ENST00000546215 NPYP01303 97 aa14.02□□□□□ -0.16
SCARB1-211ENST00000546215 AMTP48728 403 aa14.02□□□□□ -0.16
SCARB1-211ENST00000546215 TMEM243Q9BU79 118 aa14.02□□□□□ -0.16
SCARB1-211ENST00000546215 GNB1LQ9BYB4 327 aa14.02□□□□□ -0.16
SCARB1-211ENST00000546215 TSHBP01222 138 aa14.01□□□□□ -0.17
SCARB1-211ENST00000546215 PRELID3AQ96N28 172 aa14.01□□□□□ -0.17
SCARB1-211ENST00000546215 TGIF2-C20orf24A0A0A6YYL0 155 aa14□□□□□ -0.17
SCARB1-211ENST00000546215 HLA-DQA1P01909 254 aa14□□□□□ -0.17
SCARB1-211ENST00000546215 RPL32P62910 135 aaKnown RBP14□□□□□ -0.17
SCARB1-211ENST00000546215 GAGE6Q13070 117 aa14□□□□□ -0.17
SCARB1-211ENST00000546215 MPV17L2Q567V2 206 aa14□□□□□ -0.17
SCARB1-211ENST00000546215 APCSP02743 223 aa14□□□□□ -0.17
SCARB1-211ENST00000546215 PKIAP61925 76 aa14□□□□□ -0.17
SCARB1-211ENST00000546215 COX19Q49B96 90 aa14□□□□□ -0.17
SCARB1-211ENST00000546215 YPEL4Q96NS1 127 aa13.99□□□□□ -0.17
SCARB1-211ENST00000546215 LAMTOR2Q9Y2Q5 125 aa13.99□□□□□ -0.17
SCARB1-211ENST00000546215 LAGE3Q14657 143 aa13.98□□□□□ -0.17
SCARB1-211ENST00000546215 ESDP10768 282 aa13.97□□□□□ -0.17
SCARB1-211ENST00000546215 RBX1P62877 108 aa13.97□□□□□ -0.17
SCARB1-211ENST00000546215 Q6ZRN7 208 aaPredicted RBP13.97□□□□□ -0.17
SCARB1-211ENST00000546215 Q8N976 141 aa13.97□□□□□ -0.17
SCARB1-211ENST00000546215 KIR2DL4Q99706 377 aa13.97□□□□□ -0.17
SCARB1-211ENST00000546215 SMIM2Q9BVW6 85 aa13.97□□□□□ -0.17
SCARB1-211ENST00000546215 KLK12Q9UKR0 248 aa13.97□□□□□ -0.17
SCARB1-211ENST00000546215 KIAA1644Q3SXP7 199 aa13.96□□□□□ -0.17
SCARB1-211ENST00000546215 PRSS47A8MTI9 375 aa13.96□□□□□ -0.18
SCARB1-211ENST00000546215 UBE2L6O14933 153 aa13.96□□□□□ -0.18
SCARB1-211ENST00000546215 MT-ND6P03923 174 aa13.96□□□□□ -0.18
SCARB1-211ENST00000546215 LINC00336Q6ZUF6 198 aa13.96□□□□□ -0.18
SCARB1-211ENST00000546215 NFE4Q86UQ8 179 aa13.96□□□□□ -0.18
SCARB1-211ENST00000546215 CBLN2Q8IUK8 224 aa13.96□□□□□ -0.18
SCARB1-211ENST00000546215 SMCO4Q9NRQ5 59 aa13.96□□□□□ -0.18
SCARB1-211ENST00000546215 A0A1B0GUV1 79 aa13.95□□□□□ -0.18
SCARB1-211ENST00000546215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-211ENST00000546215 IGKV2-29A2NJV5 120 aaPredicted RBP13.94□□□□□ -0.18
SCARB1-211ENST00000546215 H7C423 109 aa13.94□□□□□ -0.18
SCARB1-211ENST00000546215 FCER1GP30273 86 aa13.94□□□□□ -0.18
SCARB1-211ENST00000546215 MRPL18Q9H0U6 180 aaKnown RBP13.94□□□□□ -0.18
SCARB1-211ENST00000546215 ANGP03950 147 aaKnown RBP13.93□□□□□ -0.18
SCARB1-211ENST00000546215 MAP1LC3AQ9H492 121 aa13.93□□□□□ -0.18
SCARB1-211ENST00000546215 Q9HAA7 133 aa13.93□□□□□ -0.18
SCARB1-211ENST00000546215 IGLV4-60A0A075B6I1 120 aa13.92□□□□□ -0.18
SCARB1-211ENST00000546215 TRAV8-3A0A0A6YYJ7 113 aa13.92□□□□□ -0.18
SCARB1-211ENST00000546215 PRSS29PA6NIE9 313 aa13.92□□□□□ -0.18
SCARB1-211ENST00000546215 C20orf203Q8NBC4 194 aa13.92□□□□□ -0.18
SCARB1-211ENST00000546215 PKD1P98161 4303 aa13.92□□□□□ -0.18
SCARB1-211ENST00000546215 DNAH11Q96DT5 4516 aa13.92□□□□□ -0.18
SCARB1-211ENST00000546215 LOC389332A0A1B0GUA5 103 aa13.92□□□□□ -0.18
SCARB1-211ENST00000546215 FABP9Q0Z7S8 132 aa13.92□□□□□ -0.18
SCARB1-211ENST00000546215 UBE2WQ96B02 151 aa13.92□□□□□ -0.18
SCARB1-211ENST00000546215 HECTD4Q9Y4D8 3996 aa13.91□□□□□ -0.18
SCARB1-211ENST00000546215 TCAPO15273 167 aa13.91□□□□□ -0.18
SCARB1-211ENST00000546215 FGF6P10767 208 aa13.91□□□□□ -0.18
SCARB1-211ENST00000546215 TNP2Q05952 138 aa13.91□□□□□ -0.18
SCARB1-211ENST00000546215 ENHOQ6UWT2 76 aa13.91□□□□□ -0.18
SCARB1-211ENST00000546215 EPPK1P58107 5090 aaKnown RBP13.9□□□□□ -0.18
SCARB1-211ENST00000546215 ALKBH7Q9BT30 221 aaPredicted RBP13.9□□□□□ -0.18
SCARB1-211ENST00000546215 PRR34Q9NV39 138 aa13.9□□□□□ -0.18
SCARB1-211ENST00000546215 TRAPPC1Q9Y5R8 145 aa13.9□□□□□ -0.18
SCARB1-211ENST00000546215 LINC00269Q8N2A0 174 aa13.89□□□□□ -0.19
SCARB1-211ENST00000546215 Q0VG73 95 aa13.88□□□□□ -0.19
SCARB1-211ENST00000546215 AMMECR1LQ6DCA0 310 aa13.88□□□□□ -0.19
SCARB1-211ENST00000546215 Q8N8P6 123 aa13.88□□□□□ -0.19
SCARB1-211ENST00000546215 RNASEKQ6P5S7 137 aaKnown RBP13.88□□□□□ -0.19
SCARB1-211ENST00000546215 MRPL52Q86TS9 123 aaKnown RBP13.88□□□□□ -0.19
SCARB1-211ENST00000546215 CRPP02741 224 aa13.87□□□□□ -0.19
SCARB1-211ENST00000546215 ZNF25P17030 456 aaPredicted RBP13.87□□□□□ -0.19
SCARB1-211ENST00000546215 RAB5AP20339 215 aa13.87□□□□□ -0.19
SCARB1-211ENST00000546215 IFI27P40305 119 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-211ENST00000546215 REG3AQ06141 175 aa13.86□□□□□ -0.19
SCARB1-211ENST00000546215 CLPSL2Q6UWE3 100 aa13.86□□□□□ -0.19
SCARB1-211ENST00000546215 TM2D2Q9BX73 214 aa13.85□□□□□ -0.19
SCARB1-211ENST00000546215 NXT2Q9NPJ8 142 aaKnown RBP13.85□□□□□ -0.19
SCARB1-211ENST00000546215 A0A1B0GVY2 172 aa13.84□□□□□ -0.19
SCARB1-211ENST00000546215 MIAQ16674 131 aa13.84□□□□□ -0.19
SCARB1-211ENST00000546215 UBE2D4Q9Y2X8 147 aa13.84□□□□□ -0.19
SCARB1-211ENST00000546215 IGKV2D-24A0A075B6R9 120 aa13.83□□□□□ -0.19
SCARB1-211ENST00000546215 RPL39P62891 51 aaKnown RBP13.83□□□□□ -0.19
SCARB1-211ENST00000546215 TMEM18Q96B42 140 aa13.83□□□□□ -0.19
SCARB1-211ENST00000546215 RMI2Q96E14 147 aa13.83□□□□□ -0.19
SCARB1-211ENST00000546215 CSDC2Q9Y534 153 aaKnown RBP13.83□□□□□ -0.19
SCARB1-211ENST00000546215 PKHD1P08F94 4074 aa13.83□□□□□ -0.19
SCARB1-211ENST00000546215 K7EMI3 77 aa13.83□□□□□ -0.2
SCARB1-211ENST00000546215 PSCAO43653 123 aa13.83□□□□□ -0.2
SCARB1-211ENST00000546215 OR5A1Q8NGJ0 315 aa13.83□□□□□ -0.2
SCARB1-211ENST00000546215 TMEM101Q96IK0 257 aa13.83□□□□□ -0.2
SCARB1-211ENST00000546215 COX11Q9Y6N1 276 aa13.83□□□□□ -0.2
SCARB1-211ENST00000546215 SCO1O75880 301 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms