RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TNFRSF18Q9Y5U5 241 aa10.41□□□□□ -0.74
SRP54-202ENST00000546080 EDA2RQ9HAV5 297 aa10.41□□□□□ -0.74
SRP54-202ENST00000546080 K7EQG2 157 aa10.4□□□□□ -0.74
SRP54-202ENST00000546080 MEIG1Q5JSS6 88 aa10.4□□□□□ -0.74
SRP54-202ENST00000546080 TIMM17BO60830 172 aa10.39□□□□□ -0.75
SRP54-202ENST00000546080 PROK1P58294 105 aa10.39□□□□□ -0.75
SRP54-202ENST00000546080 CFHR3Q02985 330 aa10.39□□□□□ -0.75
SRP54-202ENST00000546080 SMIM20Q8N5G0 67 aa10.39□□□□□ -0.75
SRP54-202ENST00000546080 FAM110AQ9BQ89 295 aa10.39□□□□□ -0.75
SRP54-202ENST00000546080 TLN1Q9Y490 2541 aaKnown RBP10.38□□□□□ -0.75
SRP54-202ENST00000546080 TRBV7-7A0A0K0K1E9 115 aa10.38□□□□□ -0.75
SRP54-202ENST00000546080 HTN1P15515 57 aa10.38□□□□□ -0.75
SRP54-202ENST00000546080 CHCHD5Q9BSY4 110 aa10.38□□□□□ -0.75
SRP54-202ENST00000546080 UBE2D4Q9Y2X8 147 aa10.38□□□□□ -0.75
SRP54-202ENST00000546080 DAND5Q8N907 189 aa10.38□□□□□ -0.75
SRP54-202ENST00000546080 PRRC2AP48634 2157 aaKnown RBP10.37□□□□□ -0.75
SRP54-202ENST00000546080 ACACBO00763 2458 aa10.37□□□□□ -0.75
SRP54-202ENST00000546080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.37□□□□□ -0.75
SRP54-202ENST00000546080 IGKV2-29A2NJV5 120 aaPredicted RBP10.37□□□□□ -0.75
SRP54-202ENST00000546080 TMEM95Q3KNT9 176 aa10.37□□□□□ -0.75
SRP54-202ENST00000546080 TMEM101Q96IK0 257 aa10.37□□□□□ -0.75
SRP54-202ENST00000546080 CHCHD7Q9BUK0 85 aa10.37□□□□□ -0.75
SRP54-202ENST00000546080 HERV-K104P63124 156 aa10.36□□□□□ -0.75
SRP54-202ENST00000546080 IGHV4-61A0A0C4DH41 118 aa10.35□□□□□ -0.75
SRP54-202ENST00000546080 KNCNA6PVL3 124 aa10.35□□□□□ -0.75
SRP54-202ENST00000546080 NDUFA1O15239 70 aa10.35□□□□□ -0.75
SRP54-202ENST00000546080 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
SRP54-202ENST00000546080 ITPR1Q14643 2758 aa10.35□□□□□ -0.75
SRP54-202ENST00000546080 ACYP1P07311 99 aa10.35□□□□□ -0.75
SRP54-202ENST00000546080 RBMY1A1P0DJD3 496 aaKnown RBP10.35□□□□□ -0.75
SRP54-202ENST00000546080 RBMY1CP0DJD4 496 aa10.35□□□□□ -0.75
SRP54-202ENST00000546080 PSMB8P28062 276 aa10.35□□□□□ -0.75
SRP54-202ENST00000546080 RBMY1FQ15415 496 aaKnown RBP10.35□□□□□ -0.75
SRP54-202ENST00000546080 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
SRP54-202ENST00000546080 PTPRQQ9UMZ3 2332 aa10.34□□□□□ -0.75
SRP54-202ENST00000546080 RNF152Q8N8N0 203 aa10.34□□□□□ -0.75
SRP54-202ENST00000546080 CITED2Q99967 270 aaPredicted RBP10.34□□□□□ -0.75
SRP54-202ENST00000546080 LINC00467Q9BRT7 94 aa10.34□□□□□ -0.75
SRP54-202ENST00000546080 CDKN2A-AS1Q9UH64 79 aa10.34□□□□□ -0.75
SRP54-202ENST00000546080 Q9UF83 564 aa10.33□□□□□ -0.76
SRP54-202ENST00000546080 DUX5Q96PT3 197 aa10.33□□□□□ -0.76
SRP54-202ENST00000546080 FAM236AA0A1B0GUQ0 79 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 FAM236BA0A1B0GV22 79 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 COX7A2LO14548 114 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 SYNJ2BPP57105 145 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 IMUPQ9GZP8 106 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 SPTBN1Q01082 2364 aaKnown RBP10.32□□□□□ -0.76
SRP54-202ENST00000546080 IGHV3-38A0A0C4DH36 116 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 TIRAPP58753 221 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 C10orf99Q6UWK7 81 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 Q6ZSN1 163 aa10.32□□□□□ -0.76
SRP54-202ENST00000546080 SHISA2Q6UWI4 295 aa10.31□□□□□ -0.76
SRP54-202ENST00000546080 TMEM126AQ9H061 195 aa10.31□□□□□ -0.76
SRP54-202ENST00000546080 IGLV5-45A0A087WSX0 123 aa10.31□□□□□ -0.76
SRP54-202ENST00000546080 ZNF415Q09FC8 603 aa10.31□□□□□ -0.76
SRP54-202ENST00000546080 Q9H8V8 135 aa10.31□□□□□ -0.76
SRP54-202ENST00000546080 ABCA2Q9BZC7 2435 aa10.3□□□□□ -0.76
SRP54-202ENST00000546080 DGAT2L7PQ6IED9 249 aa10.3□□□□□ -0.76
SRP54-202ENST00000546080 LINC01587Q99440 93 aa10.3□□□□□ -0.76
SRP54-202ENST00000546080 PKD1L2Q7Z442 2459 aa10.29□□□□□ -0.76
SRP54-202ENST00000546080 A0A0U1RRA0 63 aa10.29□□□□□ -0.76
SRP54-202ENST00000546080 PRM2P04554 102 aa10.29□□□□□ -0.76
SRP54-202ENST00000546080 C3orf56Q8N813 242 aa10.29□□□□□ -0.76
SRP54-202ENST00000546080 COPS9Q8WXC6 57 aa10.29□□□□□ -0.76
SRP54-202ENST00000546080 ZNF625Q96I27 306 aaPredicted RBP10.29□□□□□ -0.76
SRP54-202ENST00000546080 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.29□□□□□ -0.76
SRP54-202ENST00000546080 DNAJC30Q96LL9 226 aa10.29□□□□□ -0.76
SRP54-202ENST00000546080 UCNP55089 124 aa10.28□□□□□ -0.76
SRP54-202ENST00000546080 PIK3CD-AS1Q5SR53 167 aa10.28□□□□□ -0.76
SRP54-202ENST00000546080 LINC00643Q86TS7 51 aa10.28□□□□□ -0.76
SRP54-202ENST00000546080 SMCR5Q8TEV8 140 aa10.28□□□□□ -0.76
SRP54-202ENST00000546080 HERVK_113P63121 156 aa10.28□□□□□ -0.76
SRP54-202ENST00000546080 COX6A2Q02221 97 aa10.28□□□□□ -0.76
SRP54-202ENST00000546080 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
SRP54-202ENST00000546080 DAZ4Q86SG3 579 aaKnown RBP10.28□□□□□ -0.76
SRP54-202ENST00000546080 C10orf105Q8TEF2 133 aa10.28□□□□□ -0.76
SRP54-202ENST00000546080 DAZ3Q9NR90 486 aaKnown RBP10.28□□□□□ -0.76
SRP54-202ENST00000546080 CELSR1Q9NYQ6 3014 aa10.27□□□□□ -0.76
SRP54-202ENST00000546080 C19orf84I3L1E1 186 aa10.27□□□□□ -0.77
SRP54-202ENST00000546080 MSMBP08118 114 aa10.27□□□□□ -0.77
SRP54-202ENST00000546080 DEFB131AP59861 70 aa10.27□□□□□ -0.77
SRP54-202ENST00000546080 EPG5Q9HCE0 2579 aa10.27□□□□□ -0.77
SRP54-202ENST00000546080 SPTA1P02549 2419 aa10.27□□□□□ -0.77
SRP54-202ENST00000546080 IGLV5-39A0A0G2JS06 123 aa10.26□□□□□ -0.77
SRP54-202ENST00000546080 TMEM89A2RUT3 159 aa10.26□□□□□ -0.77
SRP54-202ENST00000546080 IGHV3-53P01767 116 aa10.26□□□□□ -0.77
SRP54-202ENST00000546080 TRACP01848 142 aa10.26□□□□□ -0.77
SRP54-202ENST00000546080 SOSTDC1Q6X4U4 206 aa10.26□□□□□ -0.77
SRP54-202ENST00000546080 Q8N2B8 174 aa10.26□□□□□ -0.77
SRP54-202ENST00000546080 USP24Q9UPU5 2620 aa10.26□□□□□ -0.77
SRP54-202ENST00000546080 COL6A6A6NMZ7 2263 aa10.25□□□□□ -0.77
SRP54-202ENST00000546080 IGHV3OR16-12A0A075B7B8 117 aa10.25□□□□□ -0.77
SRP54-202ENST00000546080 HOXD3P31249 432 aaPredicted RBP10.25□□□□□ -0.77
SRP54-202ENST00000546080 RBMY1BA6NDE4 496 aaKnown RBP10.25□□□□□ -0.77
SRP54-202ENST00000546080 RBMY1EA6NEQ0 496 aaKnown RBP10.25□□□□□ -0.77
SRP54-202ENST00000546080 IGHV4-59P01825 116 aa10.25□□□□□ -0.77
SRP54-202ENST00000546080 RBMY1DP0C7P1 496 aaKnown RBP10.25□□□□□ -0.77
SRP54-202ENST00000546080 BAALC-AS2P0C853 105 aa10.25□□□□□ -0.77
SRP54-202ENST00000546080 LINC00242Q5T6M2 205 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms