RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IL5P05113 134 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 SLC25A6P12236 298 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 SDC2P34741 201 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 PRSS3P35030 304 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 SMCO1Q147U7 214 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 SURF2Q15527 256 aaPredicted RBP1.35□□□□□ -2.19
SNHG1-224ENST00000545688 MAJINQ3KP22 176 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 C6orf226Q5I0X4 101 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 FAM162BQ5T6X4 162 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 LYZL2Q7Z4W2 148 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 FER1L6-AS1Q8NA97 138 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 LYPD6BQ8NI32 183 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 CMTM2Q8TAZ6 248 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 LRRC20Q8TCA0 184 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 ZFAND1Q8TCF1 268 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 YIPF6Q96EC8 236 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 S100A16Q96FQ6 103 aaKnown RBP1.35□□□□□ -2.19
SNHG1-224ENST00000545688 NAA60Q9H7X0 242 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 COPZ2Q9P299 210 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 LENEPQ9Y5L5 61 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 IGKV2-40A0A087WW87 121 aaPredicted RBP1.34□□□□□ -2.19
SNHG1-224ENST00000545688 TRBV6-8A0A0A6YYG3 113 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 NOL3O60936 208 aaKnown RBP1.34□□□□□ -2.19
SNHG1-224ENST00000545688 ATP5HO75947 161 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 IFNA7P01567 189 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 IGKV2D-40P01614 121 aaPredicted RBP1.34□□□□□ -2.19
SNHG1-224ENST00000545688 CD3DP04234 171 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 OR5G3P0C626 314 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 GZMBP10144 247 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 HIST1H1EP10412 219 aaKnown RBP1.34□□□□□ -2.19
SNHG1-224ENST00000545688 CRYGAP11844 174 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 RNASE3P12724 160 aaKnown RBP1.34□□□□□ -2.19
SNHG1-224ENST00000545688 UBE2D3P61077 147 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 UBE2D2P62837 147 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 CTAG1AP78358 180 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 RAB31Q13636 194 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 UBE2NLQ5JXB2 153 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 TMEM14EPQ6UXP3 125 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 IZUMO2Q6UXV1 221 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 S100A7AQ86SG5 101 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 SUN5Q8TC36 379 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 DIRC1Q969H9 104 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 DPH3Q96FX2 82 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 FAM167A-AS1Q96KT0 104 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 CIB3Q96Q77 187 aaPredicted RBP1.34□□□□□ -2.19
SNHG1-224ENST00000545688 ARL6Q9H0F7 186 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 NPVFQ9HCQ7 196 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 SLC39A9Q9NUM3 307 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 SCN3BQ9NY72 215 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 LINC00474Q9P2X8 69 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 TPRKBQ9Y3C4 175 aa1.34□□□□□ -2.19
SNHG1-224ENST00000545688 MUC12Q9UKN1 5478 aa1.34□□□□□ -2.2
SNHG1-224ENST00000545688 A0A087WX48 190 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 GVQW2A0A096LPI5 108 aaPredicted RBP1.33□□□□□ -2.2
SNHG1-224ENST00000545688 IGHV3-73A0A0B4J1V6 119 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 TRAV8-4A0A0B4J246 113 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 TRAV1-1A0A0B4J248 108 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 TRBV10-1A0A0K0K1A3 114 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 DUXBA0A1W2PPF3 345 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 PGPA6NDG6 321 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 WRBO00258 174 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 SYNGR2O43760 224 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 OR7C2O60412 319 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 CIB2O75838 187 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 TNFAIP8O95379 198 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 P01737 135 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 APOA1P02647 267 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 IAPPP10997 89 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 AKR1C4P17516 323 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 AKR1C1Q04828 323 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 SLC38A11Q08AI6 406 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 RNASE10Q5GAN6 216 aaKnown RBP1.33□□□□□ -2.2
SNHG1-224ENST00000545688 TMEM78Q5T7P6 136 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 LINC00269Q8N2A0 174 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 EXOC3-AS1Q8N2X6 119 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 ARL6IP6Q8N6S5 226 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 TMEM229BQ8NBD8 167 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 RNASE11Q8TAA1 199 aaKnown RBP1.33□□□□□ -2.2
SNHG1-224ENST00000545688 RAB2BQ8WUD1 216 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 KCNS1Q96KK3 526 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 MGST2Q99735 147 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 GGACTQ9BVM4 153 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 MIXL1Q9H2W2 232 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 URGCP-MRPS24S4R325 110 aa1.33□□□□□ -2.2
SNHG1-224ENST00000545688 TRBV7-3A0A075B6L6 115 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 SMIM26A0A096LP01 95 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 TRAV21A0A0B4J279 112 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 A8MWV9 139 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 TSPAN13O95857 204 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 CRPP02741 224 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 ANGP03950 147 aaKnown RBP1.32□□□□□ -2.2
SNHG1-224ENST00000545688 NBEAP1P0C6P0 100 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 PYYP10082 97 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 ZNF80P51504 273 aaPredicted RBP1.32□□□□□ -2.2
SNHG1-224ENST00000545688 LUZP6Q538Z0 58 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 C1orf137Q5JT78 98 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 SPANXN5Q5MJ07 72 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 C10orf113Q5VZT2 155 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 OR2T35Q8NGX2 323 aa1.32□□□□□ -2.2
SNHG1-224ENST00000545688 FXYD5Q96DB9 178 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms