RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 ATP6V0E2Q8NHE4 81 aa17.06■□□□□ 0.32
FOXA1-202ENST00000545425 ANK3Q12955 4377 aaKnown RBP17.05■□□□□ 0.32
FOXA1-202ENST00000545425 TEX48A0A1B0GUV7 120 aa17.05■□□□□ 0.32
FOXA1-202ENST00000545425 DNAJC30Q96LL9 226 aa17.05■□□□□ 0.32
FOXA1-202ENST00000545425 SPXQ9BT56 116 aa17.05■□□□□ 0.32
FOXA1-202ENST00000545425 TRBV20-1A0A075B6N2 111 aa17.05■□□□□ 0.32
FOXA1-202ENST00000545425 H3BMG7 143 aa17.05■□□□□ 0.32
FOXA1-202ENST00000545425 IGHV3-30P01768 117 aa17.05■□□□□ 0.32
FOXA1-202ENST00000545425 IGHV3-30-5P0DP03 117 aa17.05■□□□□ 0.32
FOXA1-202ENST00000545425 PRO0461Q9UI25 63 aa17.05■□□□□ 0.32
FOXA1-202ENST00000545425 DEFB131AP59861 70 aa17.04■□□□□ 0.32
FOXA1-202ENST00000545425 AMELXQ99217 191 aa17.04■□□□□ 0.32
FOXA1-202ENST00000545425 IGLV4-3A0A075B6K6 122 aa17.03■□□□□ 0.32
FOXA1-202ENST00000545425 UBE2D3P61077 147 aa17.03■□□□□ 0.32
FOXA1-202ENST00000545425 UBE2D2P62837 147 aa17.03■□□□□ 0.32
FOXA1-202ENST00000545425 NDUFA11Q86Y39 141 aa17.03■□□□□ 0.32
FOXA1-202ENST00000545425 SPANXA1Q9NS26 97 aa17.03■□□□□ 0.32
FOXA1-202ENST00000545425 TNFRSF18Q9Y5U5 241 aa17.03■□□□□ 0.32
FOXA1-202ENST00000545425 ZNF22P17026 224 aaPredicted RBP17.02■□□□□ 0.31
FOXA1-202ENST00000545425 RAX2Q96IS3 184 aa17.02■□□□□ 0.31
FOXA1-202ENST00000545425 TSPAN13O95857 204 aa17.01■□□□□ 0.31
FOXA1-202ENST00000545425 WFDC2Q14508 124 aa17.01■□□□□ 0.31
FOXA1-202ENST00000545425 DUX3Q96PT4 197 aa17.01■□□□□ 0.31
FOXA1-202ENST00000545425 TRAV25A0A0B4J276 109 aa17■□□□□ 0.31
FOXA1-202ENST00000545425 TMEM238C9JI98 176 aa17■□□□□ 0.31
FOXA1-202ENST00000545425 EMP1P54849 157 aa17■□□□□ 0.31
FOXA1-202ENST00000545425 TSPEAR-AS2P59090 65 aa17■□□□□ 0.31
FOXA1-202ENST00000545425 KNCNA6PVL3 124 aa17■□□□□ 0.31
FOXA1-202ENST00000545425 SLURP1P55000 103 aa17■□□□□ 0.31
FOXA1-202ENST00000545425 MRPS36P82909 103 aaKnown RBP17■□□□□ 0.31
FOXA1-202ENST00000545425 ATRQ13535 2644 aa16.99■□□□□ 0.31
FOXA1-202ENST00000545425 RBMY1A1P0DJD3 496 aaKnown RBP16.99■□□□□ 0.31
FOXA1-202ENST00000545425 RBMY1CP0DJD4 496 aa16.99■□□□□ 0.31
FOXA1-202ENST00000545425 SCGB1A1P11684 91 aa16.99■□□□□ 0.31
FOXA1-202ENST00000545425 RBMY1FQ15415 496 aaKnown RBP16.99■□□□□ 0.31
FOXA1-202ENST00000545425 C10orf126Q8N4M7 172 aa16.99■□□□□ 0.31
FOXA1-202ENST00000545425 DYNLRB2Q8TF09 96 aa16.99■□□□□ 0.31
FOXA1-202ENST00000545425 BEAN1Q3B7T3 259 aa16.98■□□□□ 0.31
FOXA1-202ENST00000545425 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.98■□□□□ 0.31
FOXA1-202ENST00000545425 INSP01308 110 aa16.98■□□□□ 0.31
FOXA1-202ENST00000545425 PRO1854Q9UHT4 67 aa16.98■□□□□ 0.31
FOXA1-202ENST00000545425 A0A0B4J2C4 111 aa16.97■□□□□ 0.31
FOXA1-202ENST00000545425 CD28P10747 220 aa16.96■□□□□ 0.31
FOXA1-202ENST00000545425 CFAP126Q5VTH2 177 aa16.96■□□□□ 0.31
FOXA1-202ENST00000545425 TMEM61Q8N0U2 210 aa16.96■□□□□ 0.31
FOXA1-202ENST00000545425 MAP6D1Q9H9H5 199 aa16.96■□□□□ 0.31
FOXA1-202ENST00000545425 IGHV3-53P01767 116 aa16.95■□□□□ 0.3
FOXA1-202ENST00000545425 CFC1BP0CG36 223 aa16.95■□□□□ 0.3
FOXA1-202ENST00000545425 CFC1P0CG37 223 aa16.95■□□□□ 0.3
FOXA1-202ENST00000545425 RBMY1BA6NDE4 496 aaKnown RBP16.94■□□□□ 0.3
FOXA1-202ENST00000545425 RBMY1EA6NEQ0 496 aaKnown RBP16.94■□□□□ 0.3
FOXA1-202ENST00000545425 APOMO95445 188 aa16.94■□□□□ 0.3
FOXA1-202ENST00000545425 RBMY1DP0C7P1 496 aaKnown RBP16.94■□□□□ 0.3
FOXA1-202ENST00000545425 DEFB114Q30KQ6 69 aa16.94■□□□□ 0.3
FOXA1-202ENST00000545425 SVEP1Q4LDE5 3571 aa16.94■□□□□ 0.3
FOXA1-202ENST00000545425 TINCRA0A1B0GVN0 87 aa16.93■□□□□ 0.3
FOXA1-202ENST00000545425 M0QXV9 152 aa16.93■□□□□ 0.3
FOXA1-202ENST00000545425 ETDBQ3ZM63 59 aa16.93■□□□□ 0.3
FOXA1-202ENST00000545425 SPATA25Q9BR10 227 aa16.93■□□□□ 0.3
FOXA1-202ENST00000545425 A0A0J9YXV3 536 aa16.93■□□□□ 0.3
FOXA1-202ENST00000545425 RS1O15537 224 aa16.93■□□□□ 0.3
FOXA1-202ENST00000545425 LOC107984156A0A0G2JMH3 177 aa16.92■□□□□ 0.3
FOXA1-202ENST00000545425 ARL17AQ8IVW1 177 aa16.92■□□□□ 0.3
FOXA1-202ENST00000545425 C11orf72Q8NBR9 251 aa16.92■□□□□ 0.3
FOXA1-202ENST00000545425 MDFIQ99750 246 aa16.92■□□□□ 0.3
FOXA1-202ENST00000545425 OPRPNQ99935 248 aaPredicted RBP16.92■□□□□ 0.3
FOXA1-202ENST00000545425 TIMM21Q9BVV7 248 aa16.92■□□□□ 0.3
FOXA1-202ENST00000545425 C1QTNF4Q9BXJ3 329 aa16.92■□□□□ 0.3
FOXA1-202ENST00000545425 LINC01587Q99440 93 aa16.91■□□□□ 0.3
FOXA1-202ENST00000545425 SIGMAR1Q99720 223 aa16.91■□□□□ 0.3
FOXA1-202ENST00000545425 SBSPONQ8IVN8 264 aa16.91■□□□□ 0.3
FOXA1-202ENST00000545425 COL6A5A8TX70 2615 aa16.91■□□□□ 0.3
FOXA1-202ENST00000545425 IGHV1-58A0A0C4DH39 117 aa16.9■□□□□ 0.3
FOXA1-202ENST00000545425 CMC4P56277 68 aaPredicted RBP16.9■□□□□ 0.3
FOXA1-202ENST00000545425 DEFB136Q30KP8 78 aa16.9■□□□□ 0.3
FOXA1-202ENST00000545425 RNF183Q96D59 192 aa16.9■□□□□ 0.3
FOXA1-202ENST00000545425 PSMB2P49721 201 aa16.89■□□□□ 0.29
FOXA1-202ENST00000545425 CHCHD7Q9BUK0 85 aa16.89■□□□□ 0.29
FOXA1-202ENST00000545425 GAGE12HA6NDE8 117 aa16.89■□□□□ 0.29
FOXA1-202ENST00000545425 DEFB104AQ8WTQ1 72 aa16.89■□□□□ 0.29
FOXA1-202ENST00000545425 UBE2D4Q9Y2X8 147 aa16.89■□□□□ 0.29
FOXA1-202ENST00000545425 MXRA5Q9NR99 2828 aa16.88■□□□□ 0.29
FOXA1-202ENST00000545425 IGHV3-30-3P0DP02 117 aa16.88■□□□□ 0.29
FOXA1-202ENST00000545425 C18orf65Q6ZTR6 163 aa16.88■□□□□ 0.29
FOXA1-202ENST00000545425 A0A0J9YXY3 114 aa16.87■□□□□ 0.29
FOXA1-202ENST00000545425 SMAGPQ0VAQ4 97 aa16.87■□□□□ 0.29
FOXA1-202ENST00000545425 SH2D6Q7Z4S9 175 aa16.87■□□□□ 0.29
FOXA1-202ENST00000545425 SPANXDQ9BXN6 97 aa16.87■□□□□ 0.29
FOXA1-202ENST00000545425 SPANXCQ9NY87 97 aa16.87■□□□□ 0.29
FOXA1-202ENST00000545425 FBN1P35555 2871 aaKnown RBP16.87■□□□□ 0.29
FOXA1-202ENST00000545425 A4D1N5 150 aa16.86■□□□□ 0.29
FOXA1-202ENST00000545425 HTN1P15515 57 aa16.86■□□□□ 0.29
FOXA1-202ENST00000545425 TMEM263Q8WUH6 116 aaKnown RBP16.86■□□□□ 0.29
FOXA1-202ENST00000545425 FAM104AQ969W3 186 aa16.86■□□□□ 0.29
FOXA1-202ENST00000545425 TIMM17BO60830 172 aa16.86■□□□□ 0.29
FOXA1-202ENST00000545425 FOXI1Q12951 378 aa16.86■□□□□ 0.29
FOXA1-202ENST00000545425 SPATA3Q8NHX4 192 aa16.86■□□□□ 0.29
FOXA1-202ENST00000545425 ERG28Q9UKR5 140 aa16.86■□□□□ 0.29
FOXA1-202ENST00000545425 TSSC4Q9Y5U2 329 aaPredicted RBP16.86■□□□□ 0.29
FOXA1-202ENST00000545425 IGHV3-33P01772 117 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms