RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 ZNF471Q9BX82 626 aaPredicted RBP1.95□□□□□ -2.1
SNHG1-222ENST00000545308 DPH3P1Q9H4G8 78 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 RSL24D1Q9UHA3 163 aaKnown RBP1.95□□□□□ -2.1
SNHG1-222ENST00000545308 NAT8Q9UHE5 227 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 RABAC1Q9UI14 185 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 FUT9Q9Y231 359 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 DNAH5Q8TE73 4624 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 IGKV3-7A0A075B6H7 116 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 TRAV30A0A087WSZ9 112 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 FAM236DA0A1B0GTK5 79 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 H3BNG1 76 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 GNRH2O43555 120 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 FAM236CP0DP71 79 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 RPS20P60866 119 aaKnown RBP1.94□□□□□ -2.1
SNHG1-222ENST00000545308 TMEM258P61165 79 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 HIST1H4AP62805 103 aaKnown RBP1.94□□□□□ -2.1
SNHG1-222ENST00000545308 ERHP84090 104 aaKnown RBP1.94□□□□□ -2.1
SNHG1-222ENST00000545308 MEF2BQ02080 365 aaPredicted RBP1.94□□□□□ -2.1
SNHG1-222ENST00000545308 Q56UQ5 140 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 OR51A4Q8NGJ6 313 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 OR10AC1Q8NH08 325 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 BORCS5Q969J3 196 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 XAGE1AQ9HD64 81 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 BET1LQ9NYM9 111 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 TMEM56-RWDD3S4R434 201 aa1.94□□□□□ -2.1
SNHG1-222ENST00000545308 LRP1BQ9NZR2 4599 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 MYCBP2O75592 4640 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 TRAV5A0A0B4J249 113 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 IRGMA1A4Y4 181 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 ZNF705FA8MVS1 300 aaPredicted RBP1.93□□□□□ -2.1
SNHG1-222ENST00000545308 G3V2T6 193 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 GNG7O60262 68 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 SNAPC5O75971 98 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 NAPSAO96009 420 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 ZNF705BP0CI00 300 aaPredicted RBP1.93□□□□□ -2.1
SNHG1-222ENST00000545308 TRAPPC2P0DI81 140 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 TRAPPC2BP0DI82 140 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 SAA1P0DJI8 122 aaPredicted RBP1.93□□□□□ -2.1
SNHG1-222ENST00000545308 PRB4P10163 310 aaPredicted RBP1.93□□□□□ -2.1
SNHG1-222ENST00000545308 HIST1H2BOP23527 126 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 S100A4P26447 101 aaKnown RBP1.93□□□□□ -2.1
SNHG1-222ENST00000545308 HIST1H2BBP33778 126 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 HIST1H2BDP58876 126 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 HIST1H2BCP62807 126 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 RPL19P84098 196 aaKnown RBP1.93□□□□□ -2.1
SNHG1-222ENST00000545308 DEFA5Q01523 94 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 MIAQ16674 131 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 HIST2H2BEQ16778 126 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.93□□□□□ -2.1
SNHG1-222ENST00000545308 SAMD13Q5VXD3 122 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 C12orf73Q69YU5 71 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 IDO2Q6ZQW0 420 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 TMED4Q7Z7H5 227 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 GDPD1Q8N9F7 314 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 AP3S1Q92572 193 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 HIST1H2BHQ93079 126 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 HIST1H2BNQ99877 126 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 HIST1H2BMQ99879 126 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 BANF2Q9H503 90 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 NDUFB11Q9NX14 153 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 TAS2R4Q9NYW5 299 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 IL36BQ9NZH7 164 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 UBR4Q5T4S7 5183 aa1.93□□□□□ -2.1
SNHG1-222ENST00000545308 A0A087WTM6 91 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 TRBV6-7A0A0A0MS04 114 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 TRAV26-2A0A0B4J265 109 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 H3BT86 120 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 CORTO00230 105 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 LEPROTO15243 131 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 HMGB3O15347 200 aaKnown RBP1.92□□□□□ -2.1
SNHG1-222ENST00000545308 S1PR2O95136 353 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 PPBPP02775 128 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 PRM2P04554 102 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 EVI2AP22794 236 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 ETV6P41212 452 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 VBP1P61758 197 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 PSG9Q00887 426 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 CATR1Q13166 79 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 SS18Q15532 418 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 MSMO1Q15800 293 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 C6orf201Q7Z4U5 140 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 DEFB107AQ8IZN7 70 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 C10orf126Q8N4M7 172 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 IMMP2LQ96T52 175 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 TSC22D3Q99576 134 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 SLC39A9Q9NUM3 307 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 PSORS1C2Q9UIG4 136 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 HHLA3Q9XRX5 114 aa1.92□□□□□ -2.1
SNHG1-222ENST00000545308 TIMM8BQ9Y5J9 83 aaPredicted RBP1.92□□□□□ -2.1
SNHG1-222ENST00000545308 MUC21A0A0G2JKD1 596 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 MUC21A0A140T8X8 626 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 FABP5P3A8MUU1 101 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 J3QQQ9 107 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 J3QRE1 110 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 ATG12O94817 140 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 SMIM17P0DL12 118 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 SULT1A3P0DMM9 295 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 SULT1A4P0DMN0 295 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 DEFB130BP0DP73 79 aa1.91□□□□□ -2.1
SNHG1-222ENST00000545308 DEFB130AP0DP74 79 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms