RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 GOLT1AQ6ZVE7 132 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 MIR17HGQ75NE6 70 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 STX12Q86Y82 276 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 C15orf56Q8N910 161 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 MCFD2Q8NI22 146 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 DEDD2Q8WXF8 326 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 SFRP2Q96HF1 295 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 BCL7BQ9BQE9 202 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 TPPP3Q9BW30 176 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 NPCDR1Q9BY65 106 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 IL36BQ9NZH7 164 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 RSL24D1Q9UHA3 163 aaKnown RBP2.43□□□□□ -2.02
SNHG1-220ENST00000544550 PHLDA3Q9Y5J5 127 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 IGHV1-24A0A0C4DH33 117 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 FAM24AA6NFZ4 105 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 EIF3GO75821 320 aaKnown RBP eCLIP2.42□□□□□ -2.02
SNHG1-220ENST00000544550 CST7O76096 145 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 TSPAN13O95857 204 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 SULT1A1P50225 295 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 SULT1A2P50226 295 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 RAB5CP51148 216 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 RAB4BP61018 213 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 VBP1P61758 197 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 HERV-K104P63124 156 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 EIF5AP63241 154 aaKnown RBP2.42□□□□□ -2.02
SNHG1-220ENST00000544550 IQCJQ1A5X6 159 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 HIGD2BQ4VC39 106 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 GCSAMLQ5JQS6 135 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 SAPCD1Q5SSQ6 148 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 FAM162BQ5T6X4 162 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 ZFP82Q8N141 532 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 C20orf203Q8NBC4 194 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 TVP23CQ96ET8 276 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 CARD19Q96LW7 228 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 AQP10Q96PS8 301 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 DERL1Q9BUN8 251 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 GFRA4Q9GZZ7 299 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 JPT2Q9H910 190 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 GSKIPQ9P0R6 139 aa2.42□□□□□ -2.02
SNHG1-220ENST00000544550 IGKV3D-20A0A0C4DH25 116 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 TRBV6-1A0A0K0K1D8 114 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 C9orf170A2RU37 121 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 B4DEV8 164 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 C17orf112F2Z3M2 114 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 H3BVH4 76 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 M0R381 172 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 KRTAP1-4P0C5Y4 121 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 FGF6P10767 208 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 TPT1P13693 172 aaKnown RBP2.41□□□□□ -2.02
SNHG1-220ENST00000544550 ZNF80P51504 273 aaPredicted RBP2.41□□□□□ -2.02
SNHG1-220ENST00000544550 ZNF56Q15929 161 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 DNLZQ5SXM8 178 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 NTM-AS1Q6ZSK4 140 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 TOMM5Q8N4H5 51 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 ISOC2Q96AB3 205 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 FUNDC2Q9BWH2 189 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 MED28Q9H204 178 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 NDUFA13Q9P0J0 144 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 MBD2Q9UBB5 411 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 PSG8Q9UQ74 426 aa2.41□□□□□ -2.02
SNHG1-220ENST00000544550 A0A087WXM4 84 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 LOC107984640A0A0U1RRK4 108 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 FABP5P3A8MUU1 101 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 H7C423 109 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 UBE2L6O14933 153 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 ARMS2P0C7Q2 107 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 FLI1Q01543 452 aaPredicted RBP2.4□□□□□ -2.03
SNHG1-220ENST00000544550 KRTAP7-1Q8IUC3 87 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 TMEM252Q8N6L7 170 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 C5orf17Q8NAS9 161 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 Q8NBF4 154 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 OR5C1Q8NGR4 320 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 TMEM243Q9BU79 118 aa2.4□□□□□ -2.03
SNHG1-220ENST00000544550 LSM5Q9Y4Y9 91 aaKnown RBP2.4□□□□□ -2.03
SNHG1-220ENST00000544550 IGLV4-60A0A075B6I1 120 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 IGHV1-58A0A0C4DH39 117 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 A0A0U1RRA0 63 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 A0A1W2PNN7 141 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 H3BMQ9 156 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 TCRAP04437 139 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 TMBIM6P55061 237 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 GNG5P63218 68 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 CTAG1AP78358 180 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 SYCNQ0VAF6 134 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 C9orf116Q5BN46 136 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-220ENST00000544550 EIF5AL1Q6IS14 154 aaKnown RBP2.39□□□□□ -2.03
SNHG1-220ENST00000544550 PRNTQ86SH4 94 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 CHCHD10Q8WYQ3 142 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-220ENST00000544550 FLVCR2Q9UPI3 526 aa2.39□□□□□ -2.03
SNHG1-220ENST00000544550 IGLV4-3A0A075B6K6 122 aa2.38□□□□□ -2.03
SNHG1-220ENST00000544550 A0A1W2PPV4 95 aa2.38□□□□□ -2.03
SNHG1-220ENST00000544550 IGSF23A1L1A6 192 aa2.38□□□□□ -2.03
SNHG1-220ENST00000544550 KRTAP16-1A8MUX0 517 aa2.38□□□□□ -2.03
SNHG1-220ENST00000544550 KRBOX1C9JBD0 128 aa2.38□□□□□ -2.03
SNHG1-220ENST00000544550 NDUFB6O95139 128 aa2.38□□□□□ -2.03
SNHG1-220ENST00000544550 APOMO95445 188 aa2.38□□□□□ -2.03
SNHG1-220ENST00000544550 SMIM17P0DL12 118 aa2.38□□□□□ -2.03
SNHG1-220ENST00000544550 ASB16-AS1Q495Z4 193 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms