RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 WFDC10AQ9H1F0 79 aa11.61□□□□□ -0.55
SNRNP70-203ENST00000544278 TENM1Q9UKZ4 2725 aa11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 ZNF815PA8K554 130 aa11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 HLA-DRB4P13762 266 aa11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 SMCPP49901 116 aaPredicted RBP11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 RRN3P1Q2M238 152 aa11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 PRO0461Q9UI25 63 aa11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 HLA-DRB4X5D2U9 266 aa11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 Q6ZSN1 163 aa11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 C1QTNF4Q9BXJ3 329 aa11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 LINC01549A6NIU2 74 aa11.6□□□□□ -0.55
SNRNP70-203ENST00000544278 IGHV3-53P01767 116 aa11.59□□□□□ -0.55
SNRNP70-203ENST00000544278 SMR3AQ99954 134 aa11.59□□□□□ -0.55
SNRNP70-203ENST00000544278 TM2D2Q9BX73 214 aa11.59□□□□□ -0.55
SNRNP70-203ENST00000544278 TRBV7-9A0A0J9YWB2 115 aa11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 POLR2KP53803 58 aaKnown RBP11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 TSPEAR-AS2P59090 65 aa11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 ESM1Q9NQ30 184 aa11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 M0QY20 66 aa11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 ELANEP08246 267 aa11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 KRTAP1-3Q8IUG1 177 aa11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 LINC01587Q99440 93 aa11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 ERG28Q9UKR5 140 aa11.58□□□□□ -0.56
SNRNP70-203ENST00000544278 TSPAN13O95857 204 aa11.57□□□□□ -0.56
SNRNP70-203ENST00000544278 Q6ZSV7 163 aa11.57□□□□□ -0.56
SNRNP70-203ENST00000544278 H7C2G1 150 aa11.57□□□□□ -0.56
SNRNP70-203ENST00000544278 PLNP26678 52 aa11.57□□□□□ -0.56
SNRNP70-203ENST00000544278 GAGE5Q13069 117 aa11.57□□□□□ -0.56
SNRNP70-203ENST00000544278 GAGE6Q13070 117 aa11.57□□□□□ -0.56
SNRNP70-203ENST00000544278 PLA2G2AP14555 144 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 SRSF9Q13242 221 aaKnown RBP eCLIP11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 C9orf85Q96MD7 179 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 VCX2Q9H322 139 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 A8MZ25 164 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 LINC01619G3V211 115 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 J3QLI3 93 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 CD28P10747 220 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 TEX29Q8N6K0 151 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 IGLV4-69A0A075B6H9 119 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 VCYO14598 125 aa11.56□□□□□ -0.56
SNRNP70-203ENST00000544278 MYMXA0A1B0GTQ4 84 aa11.55□□□□□ -0.56
SNRNP70-203ENST00000544278 A0A0J9YXV3 536 aa11.55□□□□□ -0.56
SNRNP70-203ENST00000544278 H3BMM0 161 aa11.55□□□□□ -0.56
SNRNP70-203ENST00000544278 CCDC179H3BU77 68 aa11.55□□□□□ -0.56
SNRNP70-203ENST00000544278 FSHBP01225 129 aa11.55□□□□□ -0.56
SNRNP70-203ENST00000544278 SCGB1C2P0DMR2 95 aa11.55□□□□□ -0.56
SNRNP70-203ENST00000544278 CARD19Q96LW7 228 aa11.55□□□□□ -0.56
SNRNP70-203ENST00000544278 TEP1Q99973 2627 aaKnown RBP11.55□□□□□ -0.56
SNRNP70-203ENST00000544278 IGIPA6NJ69 53 aa11.54□□□□□ -0.56
SNRNP70-203ENST00000544278 ZFAND6Q6FIF0 208 aa11.54□□□□□ -0.56
SNRNP70-203ENST00000544278 HIGD1BQ9P298 99 aa11.54□□□□□ -0.56
SNRNP70-203ENST00000544278 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.54□□□□□ -0.56
SNRNP70-203ENST00000544278 IGKV2-29A2NJV5 120 aaPredicted RBP11.54□□□□□ -0.56
SNRNP70-203ENST00000544278 DNAJC9-AS1A6NH13 148 aa11.54□□□□□ -0.56
SNRNP70-203ENST00000544278 MAP6D1Q9H9H5 199 aa11.54□□□□□ -0.56
SNRNP70-203ENST00000544278 NXPH4O95158 308 aa11.53□□□□□ -0.56
SNRNP70-203ENST00000544278 NPC2P61916 151 aa11.53□□□□□ -0.56
SNRNP70-203ENST00000544278 RAX2Q96IS3 184 aa11.52□□□□□ -0.56
SNRNP70-203ENST00000544278 YAE1D1Q9NRH1 226 aa11.52□□□□□ -0.56
SNRNP70-203ENST00000544278 CFAP126Q5VTH2 177 aa11.52□□□□□ -0.57
SNRNP70-203ENST00000544278 MED14OSP0DP75 135 aa11.51□□□□□ -0.57
SNRNP70-203ENST00000544278 PMVKQ15126 192 aa11.51□□□□□ -0.57
SNRNP70-203ENST00000544278 TRAV8-3A0A0A6YYJ7 113 aa11.51□□□□□ -0.57
SNRNP70-203ENST00000544278 TRAV12-1A0A0B4J245 112 aa11.51□□□□□ -0.57
SNRNP70-203ENST00000544278 LGALS9O00182 355 aa11.5□□□□□ -0.57
SNRNP70-203ENST00000544278 RPL35AP18077 110 aaKnown RBP11.5□□□□□ -0.57
SNRNP70-203ENST00000544278 DEFB114Q30KQ6 69 aa11.5□□□□□ -0.57
SNRNP70-203ENST00000544278 NSUN5P1Q3KNT7 163 aa11.5□□□□□ -0.57
SNRNP70-203ENST00000544278 CRLF1O75462 422 aa11.49□□□□□ -0.57
SNRNP70-203ENST00000544278 TRBV7-3A0A075B6L6 115 aa11.49□□□□□ -0.57
SNRNP70-203ENST00000544278 TRAV4A0A0B4J268 109 aa11.49□□□□□ -0.57
SNRNP70-203ENST00000544278 ODF3L2Q3SX64 289 aa11.49□□□□□ -0.57
SNRNP70-203ENST00000544278 FAM110AQ9BQ89 295 aa11.49□□□□□ -0.57
SNRNP70-203ENST00000544278 TRBV27A0A0K0K1C4 114 aa11.48□□□□□ -0.57
SNRNP70-203ENST00000544278 RPL32P62910 135 aaKnown RBP11.48□□□□□ -0.57
SNRNP70-203ENST00000544278 ANK3Q12955 4377 aaKnown RBP11.48□□□□□ -0.57
SNRNP70-203ENST00000544278 A0A0U1RRA0 63 aa11.48□□□□□ -0.57
SNRNP70-203ENST00000544278 NHLRC4P0CG21 123 aaPredicted RBP11.48□□□□□ -0.57
SNRNP70-203ENST00000544278 NDUFA7O95182 113 aa11.48□□□□□ -0.57
SNRNP70-203ENST00000544278 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
SNRNP70-203ENST00000544278 ANKRD29Q8N6D5 301 aa11.48□□□□□ -0.57
SNRNP70-203ENST00000544278 TCL1BO95988 128 aa11.47□□□□□ -0.57
SNRNP70-203ENST00000544278 GAGE2BQ13066 116 aa11.47□□□□□ -0.57
SNRNP70-203ENST00000544278 GAGE2EQ4V326 116 aa11.47□□□□□ -0.57
SNRNP70-203ENST00000544278 PPDPFLQ8WWR9 84 aa11.47□□□□□ -0.57
SNRNP70-203ENST00000544278 GAGE2DQ9UEU5 116 aa11.47□□□□□ -0.57
SNRNP70-203ENST00000544278 TNFRSF18Q9Y5U5 241 aa11.47□□□□□ -0.57
SNRNP70-203ENST00000544278 TRGV1A0A0A0MS02 117 aa11.47□□□□□ -0.57
SNRNP70-203ENST00000544278 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
SNRNP70-203ENST00000544278 TRRAPQ9Y4A5 3859 aa11.46□□□□□ -0.57
SNRNP70-203ENST00000544278 TRGV11A0A075B6L2 103 aa11.46□□□□□ -0.57
SNRNP70-203ENST00000544278 TRAV2A0A0B4J234 112 aa11.46□□□□□ -0.57
SNRNP70-203ENST00000544278 C20orf203Q8NBC4 194 aa11.46□□□□□ -0.57
SNRNP70-203ENST00000544278 TMEM89A2RUT3 159 aa11.46□□□□□ -0.58
SNRNP70-203ENST00000544278 PPP1R17O96001 155 aa11.46□□□□□ -0.58
SNRNP70-203ENST00000544278 PEMTQ9UBM1 199 aa11.46□□□□□ -0.58
SNRNP70-203ENST00000544278 I3L3M4 83 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 CCL24O00175 119 aa11.45□□□□□ -0.58
SNRNP70-203ENST00000544278 IGLV4-3A0A075B6K6 122 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms