RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 PKIAP61925 76 aa8.22□□□□□ -1.09
DDB1-223ENST00000543658 ORMDL2Q53FV1 153 aa8.22□□□□□ -1.09
DDB1-223ENST00000543658 RNASEKQ6P5S7 137 aaKnown RBP8.22□□□□□ -1.09
DDB1-223ENST00000543658 CHCHD5Q9BSY4 110 aa8.22□□□□□ -1.09
DDB1-223ENST00000543658 TMEM243Q9BU79 118 aa8.22□□□□□ -1.09
DDB1-223ENST00000543658 DNAH7Q8WXX0 4024 aa8.21□□□□□ -1.09
DDB1-223ENST00000543658 TSHBP01222 138 aa8.21□□□□□ -1.1
DDB1-223ENST00000543658 G0S2P27469 103 aa8.21□□□□□ -1.1
DDB1-223ENST00000543658 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.1
DDB1-223ENST00000543658 LAGE3Q14657 143 aa8.21□□□□□ -1.1
DDB1-223ENST00000543658 ESRGQ1W209 222 aa8.21□□□□□ -1.1
DDB1-223ENST00000543658 AP5S1Q9NUS5 200 aa8.21□□□□□ -1.1
DDB1-223ENST00000543658 MRPS16Q9Y3D3 137 aaKnown RBP8.21□□□□□ -1.1
DDB1-223ENST00000543658 HIST1H2BKO60814 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST1H2BJP06899 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 LINC00614P0C842 121 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST1H2BOP23527 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST1H2BBP33778 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST1H2BDP58876 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST1H2BCP62807 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 Q0VG73 95 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST2H2BEQ16778 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST1H2BHQ93079 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST1H2BNQ99877 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 HIST1H2BMQ99879 126 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 LINC00588Q9Y4M8 146 aa8.2□□□□□ -1.1
DDB1-223ENST00000543658 IGLV2-18A0A075B6J9 118 aa8.19□□□□□ -1.1
DDB1-223ENST00000543658 TMEM262E9PQX1 116 aa8.19□□□□□ -1.1
DDB1-223ENST00000543658 BTF3P20290 206 aaKnown RBP8.19□□□□□ -1.1
DDB1-223ENST00000543658 AMMECR1LQ6DCA0 310 aa8.19□□□□□ -1.1
DDB1-223ENST00000543658 NTM-AS1Q6ZSK4 140 aa8.19□□□□□ -1.1
DDB1-223ENST00000543658 NIT1Q86X76 327 aa8.19□□□□□ -1.1
DDB1-223ENST00000543658 CHCHD1Q96BP2 118 aaKnown RBP8.19□□□□□ -1.1
DDB1-223ENST00000543658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.18□□□□□ -1.1
DDB1-223ENST00000543658 A0A087WX48 190 aa8.18□□□□□ -1.1
DDB1-223ENST00000543658 IGKV2-29A2NJV5 120 aaPredicted RBP8.18□□□□□ -1.1
DDB1-223ENST00000543658 H7C423 109 aa8.18□□□□□ -1.1
DDB1-223ENST00000543658 HSBP1O75506 76 aa8.18□□□□□ -1.1
DDB1-223ENST00000543658 CYSLTR1Q9Y271 337 aa8.18□□□□□ -1.1
DDB1-223ENST00000543658 LINC01549A6NIU2 74 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 SIVA1O15304 175 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 S100A6P06703 90 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 NDUFA6P56556 154 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 GAGE6Q13070 117 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 DGAT2L7PQ6IED9 249 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 WFDC10BQ8IUB3 73 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 TMEM101Q96IK0 257 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 UPK3BQ9BT76 320 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 CHCHD7Q9BUK0 85 aa8.17□□□□□ -1.1
DDB1-223ENST00000543658 SERF1AO75920 110 aa8.16□□□□□ -1.1
DDB1-223ENST00000543658 LY6G6CO95867 125 aa8.16□□□□□ -1.1
DDB1-223ENST00000543658 ESDP10768 282 aa8.16□□□□□ -1.1
DDB1-223ENST00000543658 LGALS9CQ6DKI2 356 aa8.16□□□□□ -1.1
DDB1-223ENST00000543658 C2orf66Q6UXQ4 117 aa8.16□□□□□ -1.1
DDB1-223ENST00000543658 C20orf203Q8NBC4 194 aa8.16□□□□□ -1.1
DDB1-223ENST00000543658 LINC01546A6NGU7 62 aa8.15□□□□□ -1.1
DDB1-223ENST00000543658 IGHV3-30P01768 117 aa8.15□□□□□ -1.1
DDB1-223ENST00000543658 IGHV3-33P01772 117 aa8.15□□□□□ -1.1
DDB1-223ENST00000543658 HBDP02042 147 aa8.15□□□□□ -1.1
DDB1-223ENST00000543658 IGHV3-30-3P0DP02 117 aa8.15□□□□□ -1.1
DDB1-223ENST00000543658 IGHV3-30-5P0DP03 117 aa8.15□□□□□ -1.1
DDB1-223ENST00000543658 ZNF25P17030 456 aaPredicted RBP8.15□□□□□ -1.1
DDB1-223ENST00000543658 STARD9Q9P2P6 4700 aa8.15□□□□□ -1.11
DDB1-223ENST00000543658 CSMD3Q7Z407 3707 aa8.14□□□□□ -1.11
DDB1-223ENST00000543658 TRAV9-2A0A087WT02 112 aa8.14□□□□□ -1.11
DDB1-223ENST00000543658 FGF6P10767 208 aa8.14□□□□□ -1.11
DDB1-223ENST00000543658 RPL39P62891 51 aaKnown RBP8.14□□□□□ -1.11
DDB1-223ENST00000543658 OR5A1Q8NGJ0 315 aa8.14□□□□□ -1.11
DDB1-223ENST00000543658 LINC00476Q8WZB0 136 aa8.14□□□□□ -1.11
DDB1-223ENST00000543658 URB1-AS1Q96HZ7 61 aa8.14□□□□□ -1.11
DDB1-223ENST00000543658 Q9H8V8 135 aa8.14□□□□□ -1.11
DDB1-223ENST00000543658 ANGP03950 147 aaKnown RBP8.13□□□□□ -1.11
DDB1-223ENST00000543658 PMCHL1Q16048 86 aa8.13□□□□□ -1.11
DDB1-223ENST00000543658 MPV17L2Q567V2 206 aa8.13□□□□□ -1.11
DDB1-223ENST00000543658 LINC01556Q5JQF7 62 aa8.13□□□□□ -1.11
DDB1-223ENST00000543658 C10orf126Q8N4M7 172 aa8.13□□□□□ -1.11
DDB1-223ENST00000543658 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
DDB1-223ENST00000543658 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
DDB1-223ENST00000543658 DYNC2H1Q8NCM8 4307 aaKnown RBP8.12□□□□□ -1.11
DDB1-223ENST00000543658 CRPP02741 224 aa8.12□□□□□ -1.11
DDB1-223ENST00000543658 DNAH10OSP0CZ25 163 aa8.12□□□□□ -1.11
DDB1-223ENST00000543658 TTC32Q5I0X7 151 aa8.12□□□□□ -1.11
DDB1-223ENST00000543658 PAPPA-AS1Q5QFB9 102 aa8.12□□□□□ -1.11
DDB1-223ENST00000543658 Q6ZN92 141 aa8.12□□□□□ -1.11
DDB1-223ENST00000543658 MRPL52Q86TS9 123 aaKnown RBP8.12□□□□□ -1.11
DDB1-223ENST00000543658 SCGB3A1Q96QR1 104 aa8.12□□□□□ -1.11
DDB1-223ENST00000543658 TIMM21Q9BVV7 248 aa8.12□□□□□ -1.11
DDB1-223ENST00000543658 TMA7Q9Y2S6 64 aaKnown RBP8.12□□□□□ -1.11
DDB1-223ENST00000543658 UBE2D4Q9Y2X8 147 aa8.12□□□□□ -1.11
DDB1-223ENST00000543658 A0A1B0GUV1 79 aa8.11□□□□□ -1.11
DDB1-223ENST00000543658 K7EP13 123 aa8.11□□□□□ -1.11
DDB1-223ENST00000543658 S100A2P29034 98 aa8.11□□□□□ -1.11
DDB1-223ENST00000543658 RBX1P62877 108 aa8.11□□□□□ -1.11
DDB1-223ENST00000543658 FAM19A2Q8N3H0 131 aa8.11□□□□□ -1.11
DDB1-223ENST00000543658 Q8N976 141 aa8.11□□□□□ -1.11
DDB1-223ENST00000543658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.1□□□□□ -1.11
DDB1-223ENST00000543658 ATP5LO75964 103 aa8.1□□□□□ -1.11
DDB1-223ENST00000543658 LEPROTL1O95214 131 aa8.1□□□□□ -1.11
DDB1-223ENST00000543658 COA6Q5JTJ3 125 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms