RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 NRACQ8N912 160 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 ABCA2Q9BZC7 2435 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 A0A087WVE0 104 aa8.48□□□□□ -1.05
CDH4-201ENST00000543233 ADARB2-AS1A8MUL3 147 aa8.48□□□□□ -1.05
CDH4-201ENST00000543233 MGPP08493 103 aa8.48□□□□□ -1.05
CDH4-201ENST00000543233 IL17DQ8TAD2 202 aa8.48□□□□□ -1.05
CDH4-201ENST00000543233 TOMM6Q96B49 74 aa8.48□□□□□ -1.05
CDH4-201ENST00000543233 SORL1Q92673 2214 aa8.48□□□□□ -1.05
CDH4-201ENST00000543233 TMEM14CQ9P0S9 112 aa8.48□□□□□ -1.05
CDH4-201ENST00000543233 IGHV7-81A0A0B4J1V7 117 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 RNF5Q99942 180 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 TMEM243Q9BU79 118 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 H3BRN7 92 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 C15orf32Q32M92 178 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 ITLN2Q8WWU7 325 aaPredicted RBP8.47□□□□□ -1.05
CDH4-201ENST00000543233 HELZ2Q9BYK8 2649 aaKnown RBP8.47□□□□□ -1.05
CDH4-201ENST00000543233 NOTCH2Q04721 2471 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 IGLV11-55A0A075B6I3 123 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 ATP6V0E1O15342 81 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 LY6EQ16553 131 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 PVRIGQ6DKI7 326 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 NPBQ8NG41 125 aa8.47□□□□□ -1.05
CDH4-201ENST00000543233 CXCL5P42830 114 aa8.46□□□□□ -1.05
CDH4-201ENST00000543233 CLEC19AQ6UXS0 136 aa8.46□□□□□ -1.05
CDH4-201ENST00000543233 FAM223AQ8IWN6 122 aa8.46□□□□□ -1.05
CDH4-201ENST00000543233 LINC01561Q8N1V8 128 aa8.46□□□□□ -1.05
CDH4-201ENST00000543233 RPL39LQ96EH5 51 aaKnown RBP8.46□□□□□ -1.05
CDH4-201ENST00000543233 BBC3Q96PG8 261 aaPredicted RBP8.46□□□□□ -1.05
CDH4-201ENST00000543233 F8W735 103 aaPredicted RBP8.46□□□□□ -1.06
CDH4-201ENST00000543233 ANKRD17O75179 2603 aaKnown RBP8.46□□□□□ -1.06
CDH4-201ENST00000543233 SUMO2P61956 95 aaKnown RBP8.45□□□□□ -1.06
CDH4-201ENST00000543233 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
CDH4-201ENST00000543233 RNF182Q8N6D2 247 aa8.45□□□□□ -1.06
CDH4-201ENST00000543233 Q8N9W7 124 aa8.45□□□□□ -1.06
CDH4-201ENST00000543233 SIRPDQ9H106 197 aa8.45□□□□□ -1.06
CDH4-201ENST00000543233 LST1O00453 97 aa8.45□□□□□ -1.06
CDH4-201ENST00000543233 PAPPA-AS1Q5QFB9 102 aa8.45□□□□□ -1.06
CDH4-201ENST00000543233 PRORYQ9H606 182 aa8.45□□□□□ -1.06
CDH4-201ENST00000543233 CTSGP08311 255 aa8.45□□□□□ -1.06
CDH4-201ENST00000543233 IGKV3-7A0A075B6H7 116 aa8.44□□□□□ -1.06
CDH4-201ENST00000543233 M0R381 172 aa8.44□□□□□ -1.06
CDH4-201ENST00000543233 HIST1H4AP62805 103 aaKnown RBP8.44□□□□□ -1.06
CDH4-201ENST00000543233 FHL2Q14192 279 aa8.44□□□□□ -1.06
CDH4-201ENST00000543233 TP53TG1Q9Y2A0 90 aa8.44□□□□□ -1.06
CDH4-201ENST00000543233 I3L3M4 83 aa8.44□□□□□ -1.06
CDH4-201ENST00000543233 LMO4P61968 165 aa8.44□□□□□ -1.06
CDH4-201ENST00000543233 DEFB121Q5J5C9 76 aa8.44□□□□□ -1.06
CDH4-201ENST00000543233 LYPD1Q8N2G4 141 aa8.44□□□□□ -1.06
CDH4-201ENST00000543233 IGLV4-69A0A075B6H9 119 aa8.43□□□□□ -1.06
CDH4-201ENST00000543233 DAZ2Q13117 558 aaKnown RBP8.43□□□□□ -1.06
CDH4-201ENST00000543233 DAZ4Q86SG3 579 aaKnown RBP8.43□□□□□ -1.06
CDH4-201ENST00000543233 TIMM21Q9BVV7 248 aa8.43□□□□□ -1.06
CDH4-201ENST00000543233 DAZ1Q9NQZ3 744 aaKnown RBP8.43□□□□□ -1.06
CDH4-201ENST00000543233 DAZ3Q9NR90 486 aaKnown RBP8.43□□□□□ -1.06
CDH4-201ENST00000543233 PRRC2AP48634 2157 aaKnown RBP8.43□□□□□ -1.06
CDH4-201ENST00000543233 USP17L23D6RBM5 183 aa8.42□□□□□ -1.06
CDH4-201ENST00000543233 IGHV4-61A0A0C4DH41 118 aa8.42□□□□□ -1.06
CDH4-201ENST00000543233 IGHV3-11P01762 117 aa8.42□□□□□ -1.06
CDH4-201ENST00000543233 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
CDH4-201ENST00000543233 MINOS1Q5TGZ0 78 aa8.42□□□□□ -1.06
CDH4-201ENST00000543233 C20orf197Q8N268 126 aa8.42□□□□□ -1.06
CDH4-201ENST00000543233 MINOS1-NBL1R4GNA1 71 aa8.42□□□□□ -1.06
CDH4-201ENST00000543233 PRAC2D3DTV9 90 aa8.41□□□□□ -1.06
CDH4-201ENST00000543233 Q8N6K4 173 aa8.41□□□□□ -1.06
CDH4-201ENST00000543233 UPK3BQ9BT76 320 aa8.41□□□□□ -1.06
CDH4-201ENST00000543233 MAPK1IP1LQ8NDC0 245 aa8.41□□□□□ -1.06
CDH4-201ENST00000543233 CNFNQ9BYD5 112 aa8.41□□□□□ -1.06
CDH4-201ENST00000543233 DNAL4O96015 105 aa8.4□□□□□ -1.06
CDH4-201ENST00000543233 LINC01600Q96MT4 127 aa8.4□□□□□ -1.06
CDH4-201ENST00000543233 RETNQ9HD89 108 aa8.4□□□□□ -1.06
CDH4-201ENST00000543233 SMAD5-AS1Q9Y6J3 95 aa8.4□□□□□ -1.06
CDH4-201ENST00000543233 IGHV4-38-2P0DP08 117 aa8.4□□□□□ -1.06
CDH4-201ENST00000543233 TIRAPP58753 221 aa8.4□□□□□ -1.06
CDH4-201ENST00000543233 TMEM190Q8WZ59 177 aa8.4□□□□□ -1.06
CDH4-201ENST00000543233 HECTD1Q9ULT8 2610 aa8.4□□□□□ -1.06
CDH4-201ENST00000543233 DEFB1P60022 68 aa8.4□□□□□ -1.07
CDH4-201ENST00000543233 C9orf139Q6ZV77 190 aa8.4□□□□□ -1.07
CDH4-201ENST00000543233 RPL11P62913 178 aaKnown RBP8.39□□□□□ -1.07
CDH4-201ENST00000543233 CCL19Q99731 98 aa8.39□□□□□ -1.07
CDH4-201ENST00000543233 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
CDH4-201ENST00000543233 WNK1Q9H4A3 2382 aa8.39□□□□□ -1.07
CDH4-201ENST00000543233 TRAV12-2A0A075B6T6 113 aa8.39□□□□□ -1.07
CDH4-201ENST00000543233 FAM223BA6NKX1 122 aa8.39□□□□□ -1.07
CDH4-201ENST00000543233 AMELXQ99217 191 aa8.39□□□□□ -1.07
CDH4-201ENST00000543233 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
CDH4-201ENST00000543233 IGKV3D-20A0A0C4DH25 116 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 S100A4P26447 101 aaKnown RBP8.38□□□□□ -1.07
CDH4-201ENST00000543233 CCDC140Q96MF4 163 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 SLC50A1Q9BRV3 221 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 IGHV4-30-2A0A087WSY4 118 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 AVPP01185 164 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 TRBV12-3P01733 135 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 BAALC-AS2P0C853 105 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 DCANP1Q8TF63 244 aa8.38□□□□□ -1.07
CDH4-201ENST00000543233 RBMY1BA6NDE4 496 aaKnown RBP8.37□□□□□ -1.07
CDH4-201ENST00000543233 RBMY1EA6NEQ0 496 aaKnown RBP8.37□□□□□ -1.07
CDH4-201ENST00000543233 LEPROTO15243 131 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms