RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 IGLV4-60A0A075B6I1 120 aa10.69□□□□□ -0.7
CCND1-205ENST00000542367 A0A1B0GUV1 79 aa10.69□□□□□ -0.7
CCND1-205ENST00000542367 REG3AQ06141 175 aa10.69□□□□□ -0.7
CCND1-205ENST00000542367 COTL1Q14019 142 aa10.69□□□□□ -0.7
CCND1-205ENST00000542367 FAM210AQ96ND0 272 aa10.69□□□□□ -0.7
CCND1-205ENST00000542367 SMIM7Q9BQ49 75 aa10.69□□□□□ -0.7
CCND1-205ENST00000542367 IGLV10-54A0A075B6I4 117 aa10.68□□□□□ -0.7
CCND1-205ENST00000542367 UBE2L6O14933 153 aa10.68□□□□□ -0.7
CCND1-205ENST00000542367 NDUFS6O75380 124 aaKnown RBP10.68□□□□□ -0.7
CCND1-205ENST00000542367 RPL39LQ96EH5 51 aaKnown RBP10.68□□□□□ -0.7
CCND1-205ENST00000542367 ZNF727A8MUV8 499 aa10.67□□□□□ -0.7
CCND1-205ENST00000542367 PRSS1P07477 247 aa10.67□□□□□ -0.7
CCND1-205ENST00000542367 SRP19P09132 144 aaKnown RBP10.67□□□□□ -0.7
CCND1-205ENST00000542367 AMTP48728 403 aa10.67□□□□□ -0.7
CCND1-205ENST00000542367 CT83Q5H943 113 aa10.67□□□□□ -0.7
CCND1-205ENST00000542367 SCXQ7RTU7 201 aa10.67□□□□□ -0.7
CCND1-205ENST00000542367 LINC01551Q86U37 167 aa10.67□□□□□ -0.7
CCND1-205ENST00000542367 GFRA4Q9GZZ7 299 aa10.67□□□□□ -0.7
CCND1-205ENST00000542367 LINC00528Q8N1L1 170 aa10.66□□□□□ -0.7
CCND1-205ENST00000542367 CHAC1Q9BUX1 264 aa10.66□□□□□ -0.7
CCND1-205ENST00000542367 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.7
CCND1-205ENST00000542367 TEX261Q6UWH6 196 aa10.65□□□□□ -0.7
CCND1-205ENST00000542367 SRRM2Q9UQ35 2752 aaKnown RBP10.65□□□□□ -0.71
CCND1-205ENST00000542367 PLA2G1BP04054 148 aaKnown RBP10.64□□□□□ -0.71
CCND1-205ENST00000542367 DGAT2L7PQ6IED9 249 aa10.64□□□□□ -0.71
CCND1-205ENST00000542367 CIRBP-AS1Q8TBR5 109 aa10.64□□□□□ -0.71
CCND1-205ENST00000542367 TSKUQ8WUA8 353 aa10.64□□□□□ -0.71
CCND1-205ENST00000542367 BORCS7Q96B45 105 aa10.64□□□□□ -0.71
CCND1-205ENST00000542367 OSTCQ9NRP0 149 aa10.64□□□□□ -0.71
CCND1-205ENST00000542367 HIGD1CA8MV81 97 aa10.63□□□□□ -0.71
CCND1-205ENST00000542367 NCR2O95944 276 aa10.63□□□□□ -0.71
CCND1-205ENST00000542367 A0A1B0GUT8 65 aa10.62□□□□□ -0.71
CCND1-205ENST00000542367 SDHAF1A6NFY7 115 aa10.62□□□□□ -0.71
CCND1-205ENST00000542367 CLRN3Q8NCR9 226 aa10.62□□□□□ -0.71
CCND1-205ENST00000542367 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
CCND1-205ENST00000542367 MYCBP2O75592 4640 aa10.61□□□□□ -0.71
CCND1-205ENST00000542367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.61□□□□□ -0.71
CCND1-205ENST00000542367 IGKV2-29A2NJV5 120 aaPredicted RBP10.61□□□□□ -0.71
CCND1-205ENST00000542367 FAM231BA6NCW3 169 aa10.61□□□□□ -0.71
CCND1-205ENST00000542367 GAS8-AS1O95177 125 aa10.61□□□□□ -0.71
CCND1-205ENST00000542367 APCSP02743 223 aa10.61□□□□□ -0.71
CCND1-205ENST00000542367 TMEM241Q24JQ0 296 aa10.61□□□□□ -0.71
CCND1-205ENST00000542367 C9orf163Q8N9P6 203 aa10.61□□□□□ -0.71
CCND1-205ENST00000542367 TMEM191AQ9H0A3 160 aa10.61□□□□□ -0.71
CCND1-205ENST00000542367 IGKV3OR2-268A0A0C4DH90 116 aa10.6□□□□□ -0.71
CCND1-205ENST00000542367 TRBV6-5A0A0K0K1A5 114 aa10.6□□□□□ -0.71
CCND1-205ENST00000542367 PMCHP20382 165 aa10.6□□□□□ -0.71
CCND1-205ENST00000542367 AMMECR1LQ6DCA0 310 aa10.6□□□□□ -0.71
CCND1-205ENST00000542367 V9GYV3 84 aa10.6□□□□□ -0.71
CCND1-205ENST00000542367 I3L3M4 83 aa10.59□□□□□ -0.71
CCND1-205ENST00000542367 RAB4AP20338 218 aa10.59□□□□□ -0.71
CCND1-205ENST00000542367 FAM74A3Q4VXF1 159 aa10.59□□□□□ -0.71
CCND1-205ENST00000542367 RNASEKQ6P5S7 137 aaKnown RBP10.59□□□□□ -0.71
CCND1-205ENST00000542367 ISOC2Q96AB3 205 aa10.59□□□□□ -0.71
CCND1-205ENST00000542367 RNF185Q96GF1 192 aa10.59□□□□□ -0.71
CCND1-205ENST00000542367 ST20Q9HBF5 79 aa10.59□□□□□ -0.71
CCND1-205ENST00000542367 hDV102S1A0JD36 115 aa10.58□□□□□ -0.72
CCND1-205ENST00000542367 C9JQL5 133 aa10.58□□□□□ -0.72
CCND1-205ENST00000542367 H7C423 109 aa10.58□□□□□ -0.72
CCND1-205ENST00000542367 RPL23P62829 140 aaKnown RBP10.58□□□□□ -0.72
CCND1-205ENST00000542367 NUP35Q8NFH5 326 aa10.58□□□□□ -0.72
CCND1-205ENST00000542367 HERC1Q15751 4861 aa10.58□□□□□ -0.72
CCND1-205ENST00000542367 GAGE12HA6NDE8 117 aa10.57□□□□□ -0.72
CCND1-205ENST00000542367 FGF6P10767 208 aa10.57□□□□□ -0.72
CCND1-205ENST00000542367 AMN1Q8IY45 258 aa10.57□□□□□ -0.72
CCND1-205ENST00000542367 RPS10P46783 165 aaKnown RBP10.56□□□□□ -0.72
CCND1-205ENST00000542367 CNBPP62633 177 aaKnown RBP10.56□□□□□ -0.72
CCND1-205ENST00000542367 SRSF3P84103 164 aaKnown RBP10.56□□□□□ -0.72
CCND1-205ENST00000542367 RIGQ13278 110 aa10.56□□□□□ -0.72
CCND1-205ENST00000542367 ADIRFQ15847 76 aa10.56□□□□□ -0.72
CCND1-205ENST00000542367 SDIM1Q6ZPB5 146 aa10.56□□□□□ -0.72
CCND1-205ENST00000542367 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
CCND1-205ENST00000542367 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
CCND1-205ENST00000542367 NAT8Q9UHE5 227 aa10.56□□□□□ -0.72
CCND1-205ENST00000542367 TSHBP01222 138 aa10.55□□□□□ -0.72
CCND1-205ENST00000542367 SLPIP03973 132 aa10.55□□□□□ -0.72
CCND1-205ENST00000542367 ESDP10768 282 aa10.55□□□□□ -0.72
CCND1-205ENST00000542367 POLR2KP53803 58 aaKnown RBP10.55□□□□□ -0.72
CCND1-205ENST00000542367 PEA15Q15121 130 aa10.55□□□□□ -0.72
CCND1-205ENST00000542367 CHCHD10Q8WYQ3 142 aaPredicted RBP10.55□□□□□ -0.72
CCND1-205ENST00000542367 TMEM242Q9NWH2 141 aa10.55□□□□□ -0.72
CCND1-205ENST00000542367 NAT8BQ9UHF3 227 aa10.55□□□□□ -0.72
CCND1-205ENST00000542367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.55□□□□□ -0.72
CCND1-205ENST00000542367 SMKR1H3BMG3 65 aa10.54□□□□□ -0.72
CCND1-205ENST00000542367 ZNF25P17030 456 aaPredicted RBP10.54□□□□□ -0.72
CCND1-205ENST00000542367 CFAP161Q6P656 301 aa10.54□□□□□ -0.72
CCND1-205ENST00000542367 BTF3L4Q96K17 158 aa10.54□□□□□ -0.72
CCND1-205ENST00000542367 DMBT1Q9UGM3 2413 aaPredicted RBP10.53□□□□□ -0.72
CCND1-205ENST00000542367 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.53□□□□□ -0.72
CCND1-205ENST00000542367 TRBV27A0A0K0K1C4 114 aa10.53□□□□□ -0.72
CCND1-205ENST00000542367 PANO1I0J062 215 aa10.53□□□□□ -0.72
CCND1-205ENST00000542367 KRTAP10-4P60372 401 aaPredicted RBP10.53□□□□□ -0.72
CCND1-205ENST00000542367 C15orf56Q8N910 161 aa10.53□□□□□ -0.72
CCND1-205ENST00000542367 OR5A1Q8NGJ0 315 aa10.53□□□□□ -0.72
CCND1-205ENST00000542367 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
CCND1-205ENST00000542367 SMDT1Q9H4I9 107 aa10.53□□□□□ -0.72
CCND1-205ENST00000542367 IGHV3-64A0A075B6Q5 118 aa10.51□□□□□ -0.73
CCND1-205ENST00000542367 SMIM27A0A1W2PRY6 76 aa10.51□□□□□ -0.73
CCND1-205ENST00000542367 J3QL48 77 aa10.51□□□□□ -0.73
CCND1-205ENST00000542367 VCYO14598 125 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms