RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 IGHV3-73A0A0B4J1V6 119 aa5.59□□□□□ -1.51
AC005840.3-201ENST00000541888 IGHV3-16A0A0C4DH30 117 aa5.59□□□□□ -1.51
AC005840.3-201ENST00000541888 A8MTW9 85 aa5.59□□□□□ -1.51
AC005840.3-201ENST00000541888 DEFB4AO15263 64 aa5.59□□□□□ -1.51
AC005840.3-201ENST00000541888 INSP01308 110 aa5.59□□□□□ -1.51
AC005840.3-201ENST00000541888 EMP1P54849 157 aa5.59□□□□□ -1.51
AC005840.3-201ENST00000541888 ODF3Q96PU9 254 aa5.59□□□□□ -1.51
AC005840.3-201ENST00000541888 A0A096LNJ9 63 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 E9PLD3 99 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 INSL3P51460 131 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 CACNG7P62955 275 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 DEFB135Q30KP9 77 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 FAM74A4Q5TZK3 123 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 C14orf178Q8N769 122 aaPredicted RBP5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 RAB37Q96AX2 223 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 TM2D2Q9BX73 214 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 MRPL16Q9NX20 251 aaKnown RBP5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 PHLDA3Q9Y5J5 127 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 IGHV4-30-4P0DP06 118 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 PHLDA1Q8WV24 401 aaPredicted RBP5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 IFI27L1Q96BM0 104 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 CHAC1Q9BUX1 264 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 VCX2Q9H322 139 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 RETNQ9HD89 108 aa5.58□□□□□ -1.52
AC005840.3-201ENST00000541888 TRBV7-9A0A0J9YWB2 115 aa5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 LINC01546A6NGU7 62 aa5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 D6R8Y8 96 aa5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 SNAI2O43623 268 aa5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 MGPP08493 103 aa5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 GCSHP23434 173 aa5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 ORMDL3Q8N138 153 aa5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 CSNK1G2-AS1Q8NCQ2 148 aa5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 NAA38Q9BRA0 125 aaKnown RBP5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 MCRIP2Q9BUT9 160 aaKnown RBP5.57□□□□□ -1.52
AC005840.3-201ENST00000541888 LOC389332A0A1B0GUA5 103 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 NMUP48645 174 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 FXYD2P54710 66 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 MRPL51Q4U2R6 128 aaKnown RBP5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 CEND1Q8N111 149 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 C11orf72Q8NBR9 251 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 OR11H2Q8NH07 326 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 RNF185Q96GF1 192 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 FAM110AQ9BQ89 295 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 ZMAT4Q9H898 229 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 CYSLTR1Q9Y271 337 aa5.56□□□□□ -1.52
AC005840.3-201ENST00000541888 IGLL5B9A064 214 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 ATP5LO75964 103 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 ZNF876PQ49A33 203 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 ZNF479Q96JC4 524 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 C9orf85Q96MD7 179 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 PRELID3AQ96N28 172 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 GEMIN7Q9H840 131 aaKnown RBP5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 Q9UF83 564 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 TRAV26-1A0A087WT03 109 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 TSPAN13O95857 204 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 NPYP01303 97 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 IGHV3-53P01767 116 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 IFI27P40305 119 aaPredicted RBP5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 CRYBA4P53673 196 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 FAM104BQ5XKR9 115 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 CFAP161Q6P656 301 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 Q6ZTI0 123 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 PCP2Q8IVA1 136 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 RPL39LQ96EH5 51 aaKnown RBP5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 CNFNQ9BYD5 112 aa5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 NOP10Q9NPE3 64 aaKnown RBP5.55□□□□□ -1.52
AC005840.3-201ENST00000541888 A0A1B0GWB2 263 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 PLAC8L1A1L4L8 177 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 P0DMU3 169 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 FAM231AP0DMU4 169 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 FAM231CP0DMU5 169 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 RRN3P1Q2M238 152 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 GAGE13Q4V321 117 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 LYRM7Q5U5X0 104 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 MRAPQ8TCY5 172 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 PRO0461Q9UI25 63 aa5.54□□□□□ -1.52
AC005840.3-201ENST00000541888 TRGV1A0A0A0MS02 117 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 H3BMG7 143 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 IGKCP01834 107 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 C1QTNF4Q9BXJ3 329 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 NHP2Q9NX24 153 aaKnown RBP5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 MEGF8Q7Z7M0 2845 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 TRGV11A0A075B6L2 103 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 TRBV25-1A0A075B6N4 114 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 F5H697 171 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 GAGE7O76087 117 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 DPM2O94777 84 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 SLPIP03973 132 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 GAGE12FP0CL80 117 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 GAGE12GP0CL81 117 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 GAGE12IP0CL82 117 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 CKS2P33552 79 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 CMC4P56277 68 aaPredicted RBP5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 ZNF415Q09FC8 603 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 EGFEM1PQ0D2K5 195 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 WFDC2Q14508 124 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 ODF1Q14990 250 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 ZNF56Q15929 161 aa5.53□□□□□ -1.52
AC005840.3-201ENST00000541888 MAP1LC3AQ9H492 121 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms