RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 CD28P10747 220 aa9.64□□□□□ -0.87
PRKAB1-206ENST00000541640 BEAN1Q3B7T3 259 aa9.64□□□□□ -0.87
PRKAB1-206ENST00000541640 FAM104AQ969W3 186 aa9.64□□□□□ -0.87
PRKAB1-206ENST00000541640 PGPEP1Q9NXJ5 209 aa9.64□□□□□ -0.87
PRKAB1-206ENST00000541640 A0A0J9YXV3 536 aa9.64□□□□□ -0.87
PRKAB1-206ENST00000541640 IGHV3-30P01768 117 aa9.64□□□□□ -0.87
PRKAB1-206ENST00000541640 IGHV3-30-5P0DP03 117 aa9.64□□□□□ -0.87
PRKAB1-206ENST00000541640 FHL3Q13643 280 aa9.64□□□□□ -0.87
PRKAB1-206ENST00000541640 Q6ZSN1 163 aa9.64□□□□□ -0.87
PRKAB1-206ENST00000541640 TEX15Q9BXT5 2789 aa9.63□□□□□ -0.87
PRKAB1-206ENST00000541640 ODF3L2Q3SX64 289 aa9.63□□□□□ -0.87
PRKAB1-206ENST00000541640 HIST2H2BDQ6DRA6 164 aa9.63□□□□□ -0.87
PRKAB1-206ENST00000541640 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
PRKAB1-206ENST00000541640 H3BMG7 143 aa9.62□□□□□ -0.87
PRKAB1-206ENST00000541640 IGHV3-53P01767 116 aa9.62□□□□□ -0.87
PRKAB1-206ENST00000541640 DNAJC30Q96LL9 226 aa9.62□□□□□ -0.87
PRKAB1-206ENST00000541640 CREBBPQ92793 2442 aa9.62□□□□□ -0.87
PRKAB1-206ENST00000541640 ITPR3Q14573 2671 aa9.62□□□□□ -0.87
PRKAB1-206ENST00000541640 RS1O15537 224 aa9.62□□□□□ -0.87
PRKAB1-206ENST00000541640 CHCHD7Q9BUK0 85 aa9.62□□□□□ -0.87
PRKAB1-206ENST00000541640 MRPS36P82909 103 aaKnown RBP9.61□□□□□ -0.87
PRKAB1-206ENST00000541640 NDUFA11Q86Y39 141 aa9.61□□□□□ -0.87
PRKAB1-206ENST00000541640 Q9UF83 564 aa9.61□□□□□ -0.87
PRKAB1-206ENST00000541640 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
PRKAB1-206ENST00000541640 TSPAN13O95857 204 aa9.61□□□□□ -0.87
PRKAB1-206ENST00000541640 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
PRKAB1-206ENST00000541640 RPL24P83731 157 aaKnown RBP9.6□□□□□ -0.87
PRKAB1-206ENST00000541640 ESM1Q9NQ30 184 aa9.6□□□□□ -0.87
PRKAB1-206ENST00000541640 PRO0461Q9UI25 63 aa9.6□□□□□ -0.87
PRKAB1-206ENST00000541640 CCL24O00175 119 aa9.6□□□□□ -0.87
PRKAB1-206ENST00000541640 WFDC2Q14508 124 aa9.6□□□□□ -0.87
PRKAB1-206ENST00000541640 GAGE13Q4V321 117 aa9.6□□□□□ -0.87
PRKAB1-206ENST00000541640 UBE2D4Q9Y2X8 147 aa9.6□□□□□ -0.87
PRKAB1-206ENST00000541640 APOMO95445 188 aa9.59□□□□□ -0.87
PRKAB1-206ENST00000541640 STHQ8IWL8 128 aa9.59□□□□□ -0.87
PRKAB1-206ENST00000541640 IL17DQ8TAD2 202 aa9.59□□□□□ -0.87
PRKAB1-206ENST00000541640 CFC1BP0CG36 223 aa9.59□□□□□ -0.87
PRKAB1-206ENST00000541640 CFC1P0CG37 223 aa9.59□□□□□ -0.87
PRKAB1-206ENST00000541640 UBE2D3P61077 147 aa9.59□□□□□ -0.87
PRKAB1-206ENST00000541640 UBE2D2P62837 147 aa9.59□□□□□ -0.87
PRKAB1-206ENST00000541640 CEMP1Q6PRD7 247 aaPredicted RBP9.59□□□□□ -0.87
PRKAB1-206ENST00000541640 XCL2Q9UBD3 114 aa9.59□□□□□ -0.87
PRKAB1-206ENST00000541640 A0A1W2PRX2 142 aa9.58□□□□□ -0.88
PRKAB1-206ENST00000541640 AZU1P20160 251 aa9.58□□□□□ -0.88
PRKAB1-206ENST00000541640 C1orf158Q8N1D5 194 aa9.58□□□□□ -0.88
PRKAB1-206ENST00000541640 FLNAP21333 2647 aaKnown RBP9.58□□□□□ -0.88
PRKAB1-206ENST00000541640 IGHV3-64A0A075B6Q5 118 aa9.57□□□□□ -0.88
PRKAB1-206ENST00000541640 C11orf44Q8N8P7 122 aa9.57□□□□□ -0.88
PRKAB1-206ENST00000541640 TINCRA0A1B0GVN0 87 aa9.57□□□□□ -0.88
PRKAB1-206ENST00000541640 IGHV3-30-3P0DP02 117 aa9.57□□□□□ -0.88
PRKAB1-206ENST00000541640 TIMM21Q9BVV7 248 aa9.57□□□□□ -0.88
PRKAB1-206ENST00000541640 ZNF469Q96JG9 3925 aaPredicted RBP9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 LYRM7Q5U5X0 104 aa9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 C10orf126Q8N4M7 172 aa9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 NOTCH2Q04721 2471 aa9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 IGKV2-29A2NJV5 120 aaPredicted RBP9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 KRTAP1-1Q07627 177 aa9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 CITED2Q99967 270 aaPredicted RBP9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 GTSF1LQ9H1H1 148 aa9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 TSSC4Q9Y5U2 329 aaPredicted RBP9.56□□□□□ -0.88
PRKAB1-206ENST00000541640 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 A0A0J9YXY3 114 aa9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 C16orf95Q9H693 158 aa9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 PRO1854Q9UHT4 67 aa9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 AKAP9Q99996 3911 aa9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 LOC107984156A0A0G2JMH3 177 aa9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 CIDEAO60543 219 aa9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 ARL17AQ8IVW1 177 aa9.55□□□□□ -0.88
PRKAB1-206ENST00000541640 A4D1N5 150 aa9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 CMC4P56277 68 aaPredicted RBP9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 ETDBQ3ZM63 59 aa9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 Q6ZUT4 128 aa9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 MYO9AB2RTY4 2548 aa9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 IGHV3OR16-12A0A075B7B8 117 aa9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 RNASE1P07998 156 aaKnown RBP9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 SH2D6Q7Z4S9 175 aa9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 MUSTN1Q8IVN3 82 aa9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 MTURNQ8N3F0 131 aa9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 LINC01006Q8NI28 216 aa9.54□□□□□ -0.88
PRKAB1-206ENST00000541640 TRGV1A0A0A0MS02 117 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 TRAV8-3A0A0A6YYJ7 113 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 A0A0B4J2C4 111 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 J3QR89 54 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 PSMB2P49721 201 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 VSIG2Q96IQ7 327 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 TRBV20-1A0A075B6N2 111 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 TMEM263Q8WUH6 116 aaKnown RBP9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 LITAFQ99732 161 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 YAE1D1Q9NRH1 226 aa9.53□□□□□ -0.88
PRKAB1-206ENST00000541640 TLN2Q9Y4G6 2542 aa9.52□□□□□ -0.89
PRKAB1-206ENST00000541640 EIF4EBP3O60516 100 aaPredicted RBP9.52□□□□□ -0.89
PRKAB1-206ENST00000541640 SFTA2Q6UW10 78 aa9.52□□□□□ -0.89
PRKAB1-206ENST00000541640 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
PRKAB1-206ENST00000541640 TRBV10-1A0A0K0K1A3 114 aa9.51□□□□□ -0.89
PRKAB1-206ENST00000541640 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
PRKAB1-206ENST00000541640 IGHV3-33P01772 117 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms