RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 WWC2-AS2Q96NR7 200 aa19.53■□□□□ 0.72
CCM2-218ENST00000541586 SYS1-DBNDD2H3BUS1 97 aa19.52■□□□□ 0.72
CCM2-218ENST00000541586 TOMM6Q96B49 74 aa19.52■□□□□ 0.72
CCM2-218ENST00000541586 RHOHQ15669 191 aa19.51■□□□□ 0.71
CCM2-218ENST00000541586 C2orf66Q6UXQ4 117 aa19.51■□□□□ 0.71
CCM2-218ENST00000541586 Q6ZTC4 211 aa19.51■□□□□ 0.71
CCM2-218ENST00000541586 IFI27L1Q96BM0 104 aa19.51■□□□□ 0.71
CCM2-218ENST00000541586 HHLA3Q9XRX5 114 aa19.51■□□□□ 0.71
CCM2-218ENST00000541586 SPATA12Q7Z6I5 190 aa19.51■□□□□ 0.71
CCM2-218ENST00000541586 PHLDA1Q8WV24 401 aaPredicted RBP19.51■□□□□ 0.71
CCM2-218ENST00000541586 IGHV3-38A0A0C4DH36 116 aa19.5■□□□□ 0.71
CCM2-218ENST00000541586 LOC100131303A0A0U1RQF7 123 aa19.5■□□□□ 0.71
CCM2-218ENST00000541586 GAGE12JA6NER3 117 aa19.5■□□□□ 0.71
CCM2-218ENST00000541586 GAGE1Q13065 139 aa19.5■□□□□ 0.71
CCM2-218ENST00000541586 GAGE4Q13068 117 aa19.5■□□□□ 0.71
CCM2-218ENST00000541586 GAGE5Q13069 117 aa19.5■□□□□ 0.71
CCM2-218ENST00000541586 GAGE13Q4V321 117 aa19.5■□□□□ 0.71
CCM2-218ENST00000541586 PRADC1Q9BSG0 188 aa19.49■□□□□ 0.71
CCM2-218ENST00000541586 H0Y8G0 127 aa19.48■□□□□ 0.71
CCM2-218ENST00000541586 G0S2P27469 103 aa19.48■□□□□ 0.71
CCM2-218ENST00000541586 UBE2D3P61077 147 aa19.48■□□□□ 0.71
CCM2-218ENST00000541586 UBE2D2P62837 147 aa19.48■□□□□ 0.71
CCM2-218ENST00000541586 HTN3P15516 51 aa19.48■□□□□ 0.71
CCM2-218ENST00000541586 CYSLTR1Q9Y271 337 aa19.48■□□□□ 0.71
CCM2-218ENST00000541586 PET117Q6UWS5 81 aa19.47■□□□□ 0.71
CCM2-218ENST00000541586 DNAH7Q8WXX0 4024 aa19.47■□□□□ 0.71
CCM2-218ENST00000541586 ATP5LO75964 103 aa19.46■□□□□ 0.71
CCM2-218ENST00000541586 ATP5G1P05496 136 aa19.46■□□□□ 0.71
CCM2-218ENST00000541586 CRYBA4P53673 196 aa19.46■□□□□ 0.71
CCM2-218ENST00000541586 RPL39P62891 51 aaKnown RBP19.46■□□□□ 0.71
CCM2-218ENST00000541586 SCGB3A1Q96QR1 104 aa19.46■□□□□ 0.71
CCM2-218ENST00000541586 PRO0255Q9UI72 69 aa19.46■□□□□ 0.71
CCM2-218ENST00000541586 COTL1Q14019 142 aa19.45■□□□□ 0.7
CCM2-218ENST00000541586 DAZ4Q86SG3 579 aaKnown RBP19.45■□□□□ 0.7
CCM2-218ENST00000541586 DAZ3Q9NR90 486 aaKnown RBP19.45■□□□□ 0.7
CCM2-218ENST00000541586 C20orf203Q8NBC4 194 aa19.44■□□□□ 0.7
CCM2-218ENST00000541586 LINC01549A6NIU2 74 aa19.42■□□□□ 0.7
CCM2-218ENST00000541586 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.42■□□□□ 0.7
CCM2-218ENST00000541586 ZFAND6Q6FIF0 208 aa19.42■□□□□ 0.7
CCM2-218ENST00000541586 MUC7Q8TAX7 377 aa19.42■□□□□ 0.7
CCM2-218ENST00000541586 ERASQ7Z444 233 aa19.42■□□□□ 0.7
CCM2-218ENST00000541586 LINC00694P0DN24 101 aa19.41■□□□□ 0.7
CCM2-218ENST00000541586 LINC01545Q5VT33 79 aa19.41■□□□□ 0.7
CCM2-218ENST00000541586 CHCHD7Q9BUK0 85 aa19.41■□□□□ 0.7
CCM2-218ENST00000541586 DEFB131BA0A096LNP1 70 aa19.4■□□□□ 0.7
CCM2-218ENST00000541586 C20orf202A1L168 122 aa19.4■□□□□ 0.7
CCM2-218ENST00000541586 IGIPA6NJ69 53 aa19.39■□□□□ 0.7
CCM2-218ENST00000541586 F5H768 121 aa19.39■□□□□ 0.7
CCM2-218ENST00000541586 PAX4O43316 350 aa19.39■□□□□ 0.7
CCM2-218ENST00000541586 PRSS1P07477 247 aa19.39■□□□□ 0.7
CCM2-218ENST00000541586 GYPEP15421 78 aa19.39■□□□□ 0.7
CCM2-218ENST00000541586 TEX43Q6ZNM6 134 aa19.39■□□□□ 0.7
CCM2-218ENST00000541586 TRAV10A0A0B4J240 114 aa19.39■□□□□ 0.69
CCM2-218ENST00000541586 PMCHL2Q9BQD1 86 aa19.39■□□□□ 0.69
CCM2-218ENST00000541586 Q6ZN92 141 aa19.37■□□□□ 0.69
CCM2-218ENST00000541586 NTM-AS1Q6ZSK4 140 aa19.37■□□□□ 0.69
CCM2-218ENST00000541586 ATOH7Q8N100 152 aa19.37■□□□□ 0.69
CCM2-218ENST00000541586 VSIG2Q96IQ7 327 aa19.37■□□□□ 0.69
CCM2-218ENST00000541586 S100A12P80511 92 aa19.37■□□□□ 0.69
CCM2-218ENST00000541586 LGALS9CQ6DKI2 356 aa19.37■□□□□ 0.69
CCM2-218ENST00000541586 TIMM17AQ99595 171 aa19.37■□□□□ 0.69
CCM2-218ENST00000541586 A0A0J9YY99 117 aa19.36■□□□□ 0.69
CCM2-218ENST00000541586 CSMD3Q7Z407 3707 aa19.35■□□□□ 0.69
CCM2-218ENST00000541586 TMEM141Q96I45 108 aa19.35■□□□□ 0.69
CCM2-218ENST00000541586 TRAV26-1A0A087WT03 109 aa19.34■□□□□ 0.69
CCM2-218ENST00000541586 BAALCQ8WXS3 180 aa19.34■□□□□ 0.69
CCM2-218ENST00000541586 GTSF1LQ9H1H1 148 aa19.34■□□□□ 0.69
CCM2-218ENST00000541586 IGKV2D-29A0A075B6S2 120 aaPredicted RBP19.34■□□□□ 0.69
CCM2-218ENST00000541586 IGKV2-29A2NJV5 120 aaPredicted RBP19.34■□□□□ 0.69
CCM2-218ENST00000541586 ODF1Q14990 250 aa19.33■□□□□ 0.68
CCM2-218ENST00000541586 CEMP1Q6PRD7 247 aaPredicted RBP19.33■□□□□ 0.68
CCM2-218ENST00000541586 IGLL5B9A064 214 aa19.32■□□□□ 0.68
CCM2-218ENST00000541586 ATP6V0E2Q8NHE4 81 aa19.31■□□□□ 0.68
CCM2-218ENST00000541586 TRAV12-1A0A0B4J245 112 aa19.3■□□□□ 0.68
CCM2-218ENST00000541586 NUPR2A6NF83 97 aa19.3■□□□□ 0.68
CCM2-218ENST00000541586 OPRPNQ99935 248 aaPredicted RBP19.3■□□□□ 0.68
CCM2-218ENST00000541586 VAMP8Q9BV40 100 aa19.3■□□□□ 0.68
CCM2-218ENST00000541586 PYGO1Q9Y3Y4 419 aa19.3■□□□□ 0.68
CCM2-218ENST00000541586 STARD9Q9P2P6 4700 aa19.29■□□□□ 0.68
CCM2-218ENST00000541586 A0A087WX48 190 aa19.29■□□□□ 0.68
CCM2-218ENST00000541586 UBE2D4Q9Y2X8 147 aa19.29■□□□□ 0.68
CCM2-218ENST00000541586 C3orf84H3BNL1 204 aa19.28■□□□□ 0.68
CCM2-218ENST00000541586 MAJINQ3KP22 176 aa19.28■□□□□ 0.68
CCM2-218ENST00000541586 ZNF664Q8N3J9 261 aa19.28■□□□□ 0.68
CCM2-218ENST00000541586 KLK5Q9Y337 293 aaPredicted RBP19.28■□□□□ 0.68
CCM2-218ENST00000541586 PAM16Q9Y3D7 125 aa19.28■□□□□ 0.68
CCM2-218ENST00000541586 PRSS29PA6NIE9 313 aa19.27■□□□□ 0.68
CCM2-218ENST00000541586 SPANXA1Q9NS26 97 aa19.27■□□□□ 0.68
CCM2-218ENST00000541586 IGLV4-3A0A075B6K6 122 aa19.26■□□□□ 0.67
CCM2-218ENST00000541586 TRBV25-1A0A075B6N4 114 aa19.26■□□□□ 0.67
CCM2-218ENST00000541586 A0A096LPF7 62 aa19.26■□□□□ 0.67
CCM2-218ENST00000541586 TRBV6-8A0A0A6YYG3 113 aa19.26■□□□□ 0.67
CCM2-218ENST00000541586 CASC10Q5T4H9 136 aa19.26■□□□□ 0.67
CCM2-218ENST00000541586 ZC2HC1BQ5TFG8 222 aa19.26■□□□□ 0.67
CCM2-218ENST00000541586 TMEM243Q9BU79 118 aa19.26■□□□□ 0.67
CCM2-218ENST00000541586 MRPL35Q9NZE8 188 aaKnown RBP19.26■□□□□ 0.67
CCM2-218ENST00000541586 TRAV9-2A0A087WT02 112 aa19.25■□□□□ 0.67
CCM2-218ENST00000541586 TMEM97Q5BJF2 176 aa19.25■□□□□ 0.67
CCM2-218ENST00000541586 FAM104AQ969W3 186 aa19.25■□□□□ 0.67
CCM2-218ENST00000541586 PMVKQ15126 192 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms