RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 LYG2Q86SG7 212 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 OR10AG1Q8NH19 301 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 DGCR14Q96DF8 476 aaKnown RBP0.42□□□□□ -2.34
PRKDC-210ENST00000541488 OR2J1Q9GZK6 312 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 POPDC3Q9HBV1 291 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 HSPB8Q9UJY1 196 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 PRNDQ9UKY0 176 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 TRAV5A0A0B4J249 113 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 ATP6V1G2-DDX39BF2Z307 99 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 H7C1C5 153 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 IGLV3-1P01715 115 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 IFNA4P05014 189 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 CD2P06729 351 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 PHBP35232 272 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 VBP1P61758 197 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 LCN6P62502 163 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 PATE2Q6UY27 113 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 IFT20Q8IY31 132 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 RAB37Q96AX2 223 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 CEP19Q96LK0 163 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 HYLS1Q96M11 299 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 WFDC10AQ9H1F0 79 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 SH3BGRL3Q9H299 93 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 DPH3P1Q9H4G8 78 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 TMEM138Q9NPI0 162 aa0.41□□□□□ -2.34
PRKDC-210ENST00000541488 LYRM2Q9NU23 88 aaPredicted RBP0.41□□□□□ -2.34
PRKDC-210ENST00000541488 OR2T8A6NH00 312 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 RIIAD1A6NNX1 92 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 IGLV1-51P01701 117 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 CRHP06850 196 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 OGNP20774 298 aaKnown RBP0.4□□□□□ -2.35
PRKDC-210ENST00000541488 RPL37AP61513 92 aaKnown RBP0.4□□□□□ -2.35
PRKDC-210ENST00000541488 ARPINQ7Z6K5 226 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 NUP35Q8NFH5 326 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 OR10AC1Q8NH08 325 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 Q8TAT8 98 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 MALSU1Q96EH3 234 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 ZNF714Q96N38 554 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 PRRT1Q99946 306 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 LXNQ9BS40 222 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 MAP1LC3BQ9GZQ8 125 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 PSTPIP2Q9H939 334 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 STOML2Q9UJZ1 356 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 SSR3Q9UNL2 185 aa0.4□□□□□ -2.35
PRKDC-210ENST00000541488 SYNE1Q8NF91 8797 aaKnown RBP0.4□□□□□ -2.35
PRKDC-210ENST00000541488 NBDYA0A0U1RRE5 68 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 FAM92AA1XBS5 289 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 H3BUX3 64 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 IFNA1P01562 189 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 TRGC2P03986 189 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 MT1FP04733 61 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 TCTAP57738 103 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 GNG5P63218 68 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 KLRD1Q13241 179 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 POU6F1Q14863 301 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 DEFB135Q30KP9 77 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 KRTAP19-3Q7Z4W3 81 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 TMED4Q7Z7H5 227 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 S100A7AQ86SG5 101 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 EXOC3-AS1Q8N2X6 119 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 OR4K15Q8NH41 348 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 OR13C6PQ8NH95 151 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 CHCHD1Q96BP2 118 aaKnown RBP0.39□□□□□ -2.35
PRKDC-210ENST00000541488 LINC01600Q96MT4 127 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 PBDC1Q9BVG4 233 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 CACYBPQ9HB71 228 aaKnown RBP0.39□□□□□ -2.35
PRKDC-210ENST00000541488 DYNLRB1Q9NP97 96 aa0.39□□□□□ -2.35
PRKDC-210ENST00000541488 hDV103S1A0JD37 113 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 JMJD7-PLA2G4BH0Y9G9 81 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 DEFB4AO15263 64 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 LYRM1O43325 122 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 HIST1H2BKO60814 126 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 IFNA21P01568 189 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 IFNA17P01571 189 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 MT2AP02795 61 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 HIST1H2BJP06899 126 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 INSL3P51460 131 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 RPL19P84098 196 aaKnown RBP0.38□□□□□ -2.35
PRKDC-210ENST00000541488 TFAMQ00059 246 aaKnown RBP0.38□□□□□ -2.35
PRKDC-210ENST00000541488 SPATA45Q537H7 98 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 HACD4Q5VWC8 232 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 SPATA8Q6RVD6 105 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 LRRC18Q8N456 261 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 TSLPQ969D9 159 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 ZHX1-C8orf76Q96EF9 292 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 ZC2HC1AQ96GY0 325 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 GPX7Q96SL4 187 aaPredicted RBP0.38□□□□□ -2.35
PRKDC-210ENST00000541488 PAIP2Q9BPZ3 127 aaKnown RBP0.38□□□□□ -2.35
PRKDC-210ENST00000541488 GINS3Q9BRX5 216 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 GGACTQ9BVM4 153 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 RTL8AQ9BWD3 113 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 BOLA2Q9H3K6 86 aa0.38□□□□□ -2.35
PRKDC-210ENST00000541488 A6NN06 94 aa0.37□□□□□ -2.35
PRKDC-210ENST00000541488 PIAS1O75925 651 aa0.37□□□□□ -2.35
PRKDC-210ENST00000541488 TMBIM6P55061 237 aa0.37□□□□□ -2.35
PRKDC-210ENST00000541488 INSL4Q14641 139 aa0.37□□□□□ -2.35
PRKDC-210ENST00000541488 C1orf140Q5VVS0 124 aa0.37□□□□□ -2.35
PRKDC-210ENST00000541488 PHF5AQ7RTV0 110 aaKnown RBP0.37□□□□□ -2.35
PRKDC-210ENST00000541488 C10orf95Q9H7T3 257 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms