RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 A0A1W2PNN7 141 aa7.17□□□□□ -1.26
COPA-205ENST00000541366 CACNG7P62955 275 aa7.17□□□□□ -1.26
COPA-205ENST00000541366 ZNF664Q8N3J9 261 aa7.17□□□□□ -1.26
COPA-205ENST00000541366 NKX6-2Q9C056 277 aaPredicted RBP7.17□□□□□ -1.26
COPA-205ENST00000541366 LINC00474Q9P2X8 69 aa7.17□□□□□ -1.26
COPA-205ENST00000541366 TRAV26-2A0A0B4J265 109 aa7.16□□□□□ -1.26
COPA-205ENST00000541366 CXCL1P09341 107 aa7.16□□□□□ -1.26
COPA-205ENST00000541366 AKR1C3P42330 323 aa7.16□□□□□ -1.26
COPA-205ENST00000541366 AMTP48728 403 aa7.16□□□□□ -1.26
COPA-205ENST00000541366 IFITM3Q01628 133 aa7.16□□□□□ -1.26
COPA-205ENST00000541366 FOXI1Q12951 378 aa7.16□□□□□ -1.26
COPA-205ENST00000541366 CST9LP1Q5W188 147 aa7.16□□□□□ -1.26
COPA-205ENST00000541366 RPL7L1Q6DKI1 246 aaKnown RBP7.16□□□□□ -1.26
COPA-205ENST00000541366 GAGE2BQ13066 116 aa7.15□□□□□ -1.26
COPA-205ENST00000541366 PGLYRP4Q96LB8 373 aa7.15□□□□□ -1.26
COPA-205ENST00000541366 CARD19Q96LW7 228 aa7.15□□□□□ -1.26
COPA-205ENST00000541366 MARVELD1Q9BSK0 173 aa7.15□□□□□ -1.26
COPA-205ENST00000541366 MT-ND6P03923 174 aa7.14□□□□□ -1.27
COPA-205ENST00000541366 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
COPA-205ENST00000541366 C1orf137Q5JT78 98 aa7.14□□□□□ -1.27
COPA-205ENST00000541366 RASL11AQ6T310 242 aa7.14□□□□□ -1.27
COPA-205ENST00000541366 MLST8Q9BVC4 326 aa7.14□□□□□ -1.27
COPA-205ENST00000541366 TPPP3Q9BW30 176 aa7.14□□□□□ -1.27
COPA-205ENST00000541366 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.13□□□□□ -1.27
COPA-205ENST00000541366 IGKV2-29A2NJV5 120 aaPredicted RBP7.13□□□□□ -1.27
COPA-205ENST00000541366 MAP1LC3B2A6NCE7 125 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 UPK1BO75841 260 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 XCL1P47992 114 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 DEFA1P59665 94 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 COTL1Q14019 142 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 Q5BKY6 102 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 PHF5AQ7RTV0 110 aaKnown RBP7.13□□□□□ -1.27
COPA-205ENST00000541366 BAGE2Q86Y30 109 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 STOML3Q8TAV4 291 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 MAP1LC3BQ9GZQ8 125 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 NIT2Q9NQR4 276 aa7.13□□□□□ -1.27
COPA-205ENST00000541366 PAGE4O60829 102 aa7.12□□□□□ -1.27
COPA-205ENST00000541366 SYCNQ0VAF6 134 aa7.12□□□□□ -1.27
COPA-205ENST00000541366 RNASEKQ6P5S7 137 aaKnown RBP7.12□□□□□ -1.27
COPA-205ENST00000541366 BCL2P10415 239 aa7.11□□□□□ -1.27
COPA-205ENST00000541366 FHITP49789 147 aa7.11□□□□□ -1.27
COPA-205ENST00000541366 C9orf116Q5BN46 136 aaPredicted RBP7.11□□□□□ -1.27
COPA-205ENST00000541366 AKR1C8PQ5T2L2 129 aa7.11□□□□□ -1.27
COPA-205ENST00000541366 AMMECR1LQ6DCA0 310 aa7.11□□□□□ -1.27
COPA-205ENST00000541366 Q6ZNX1 250 aa7.11□□□□□ -1.27
COPA-205ENST00000541366 IGHV1-58A0A0C4DH39 117 aa7.1□□□□□ -1.27
COPA-205ENST00000541366 CCL25O15444 150 aa7.1□□□□□ -1.27
COPA-205ENST00000541366 IGLC6P0CF74 106 aa7.1□□□□□ -1.27
COPA-205ENST00000541366 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
COPA-205ENST00000541366 FER1L6-AS1Q8NA97 138 aa7.1□□□□□ -1.27
COPA-205ENST00000541366 PKIGQ9Y2B9 76 aa7.1□□□□□ -1.27
COPA-205ENST00000541366 LOC107984640A0A0U1RRK4 108 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 A0A1B0GV50 99 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 IGLV7-43P04211 117 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 KRTAP1-4P0C5Y4 121 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 FGF6P10767 208 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 NTF3P20783 257 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 DIRC1Q969H9 104 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 TCEAL7Q9BRU2 100 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
COPA-205ENST00000541366 LINC00959A0A1B0GUT2 108 aa7.08□□□□□ -1.28
COPA-205ENST00000541366 H0Y9J4 135 aa7.08□□□□□ -1.28
COPA-205ENST00000541366 ZNF561-AS1K7EIQ3 104 aa7.08□□□□□ -1.28
COPA-205ENST00000541366 RPL39LQ96EH5 51 aaKnown RBP7.08□□□□□ -1.28
COPA-205ENST00000541366 IGLV4-69A0A075B6H9 119 aa7.07□□□□□ -1.28
COPA-205ENST00000541366 BORCS7-ASMTA0A0B4J1R7 106 aa7.07□□□□□ -1.28
COPA-205ENST00000541366 S100A9P06702 114 aaKnown RBP7.07□□□□□ -1.28
COPA-205ENST00000541366 CAMPP49913 170 aa7.07□□□□□ -1.28
COPA-205ENST00000541366 GATD1Q8NB37 220 aa7.07□□□□□ -1.28
COPA-205ENST00000541366 OR2D3Q8NGH3 330 aa7.07□□□□□ -1.28
COPA-205ENST00000541366 OR5A1Q8NGJ0 315 aa7.07□□□□□ -1.28
COPA-205ENST00000541366 S100ZQ8WXG8 99 aa7.07□□□□□ -1.28
COPA-205ENST00000541366 ALG5Q9Y673 324 aa7.07□□□□□ -1.28
COPA-205ENST00000541366 IGLV1-50A0A075B6I6 118 aa7.06□□□□□ -1.28
COPA-205ENST00000541366 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.06□□□□□ -1.28
COPA-205ENST00000541366 MEF2BQ02080 365 aaPredicted RBP7.06□□□□□ -1.28
COPA-205ENST00000541366 RPL18AQ02543 176 aaKnown RBP7.06□□□□□ -1.28
COPA-205ENST00000541366 LYZL1Q6UWQ5 148 aa7.06□□□□□ -1.28
COPA-205ENST00000541366 TMUB2Q71RG4 321 aa7.06□□□□□ -1.28
COPA-205ENST00000541366 A0A087WZ39 114 aa7.05□□□□□ -1.28
COPA-205ENST00000541366 TSPAN13O95857 204 aa7.05□□□□□ -1.28
COPA-205ENST00000541366 APCSP02743 223 aa7.05□□□□□ -1.28
COPA-205ENST00000541366 TRGC1P0CF51 173 aa7.05□□□□□ -1.28
COPA-205ENST00000541366 RPL35P42766 123 aaKnown RBP7.05□□□□□ -1.28
COPA-205ENST00000541366 NUP35Q8NFH5 326 aa7.05□□□□□ -1.28
COPA-205ENST00000541366 OPRPNQ99935 248 aaPredicted RBP7.05□□□□□ -1.28
COPA-205ENST00000541366 MED28Q9H204 178 aa7.05□□□□□ -1.28
COPA-205ENST00000541366 FXYD6-FXYD2A0A087WZ82 144 aa7.04□□□□□ -1.28
COPA-205ENST00000541366 FAM168BA1KXE4 195 aa7.04□□□□□ -1.28
COPA-205ENST00000541366 H3BS24 57 aa7.04□□□□□ -1.28
COPA-205ENST00000541366 EIF5AP63241 154 aaKnown RBP7.04□□□□□ -1.28
COPA-205ENST00000541366 APOMO95445 188 aa7.03□□□□□ -1.28
COPA-205ENST00000541366 UBE2D1P51668 147 aa7.03□□□□□ -1.28
COPA-205ENST00000541366 CD164L2Q6UWJ8 174 aa7.03□□□□□ -1.28
COPA-205ENST00000541366 LINC00299Q6ZSB3 139 aa7.03□□□□□ -1.28
COPA-205ENST00000541366 SFT2D1Q8WV19 159 aa7.03□□□□□ -1.28
COPA-205ENST00000541366 CAMK2N2Q96S95 79 aa7.03□□□□□ -1.28
COPA-205ENST00000541366 CYTL1Q9NRR1 136 aa7.03□□□□□ -1.28
COPA-205ENST00000541366 C19orf71A6NCJ1 209 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms