RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 C14orf177Q52M58 125 aa13.8□□□□□ -0.2
PTMS-205ENST00000540828 C20orf203Q8NBC4 194 aa13.8□□□□□ -0.2
PTMS-205ENST00000540828 DEFB104AQ8WTQ1 72 aa13.8□□□□□ -0.2
PTMS-205ENST00000540828 LINC01620Q4KN68 170 aa13.79□□□□□ -0.2
PTMS-205ENST00000540828 CLPSL2Q6UWE3 100 aa13.79□□□□□ -0.2
PTMS-205ENST00000540828 TEX261Q6UWH6 196 aa13.79□□□□□ -0.2
PTMS-205ENST00000540828 TSKUQ8WUA8 353 aa13.79□□□□□ -0.2
PTMS-205ENST00000540828 GFRA4Q9GZZ7 299 aa13.79□□□□□ -0.2
PTMS-205ENST00000540828 FAM231BA6NCW3 169 aa13.78□□□□□ -0.2
PTMS-205ENST00000540828 RPL39LQ96EH5 51 aaKnown RBP13.78□□□□□ -0.2
PTMS-205ENST00000540828 VPS13BQ7Z7G8 4022 aa13.78□□□□□ -0.2
PTMS-205ENST00000540828 IGLV4-60A0A075B6I1 120 aa13.77□□□□□ -0.21
PTMS-205ENST00000540828 USP17L23D6RBM5 183 aa13.77□□□□□ -0.21
PTMS-205ENST00000540828 FAM229AH3BQW9 127 aa13.77□□□□□ -0.21
PTMS-205ENST00000540828 AMTP48728 403 aa13.77□□□□□ -0.21
PTMS-205ENST00000540828 REG3AQ06141 175 aa13.77□□□□□ -0.21
PTMS-205ENST00000540828 FAM74A3Q4VXF1 159 aa13.77□□□□□ -0.21
PTMS-205ENST00000540828 BORCS7Q96B45 105 aa13.77□□□□□ -0.21
PTMS-205ENST00000540828 A0A1B0GUT8 65 aa13.76□□□□□ -0.21
PTMS-205ENST00000540828 HIGD1CA8MV81 97 aa13.76□□□□□ -0.21
PTMS-205ENST00000540828 HLA-DQA1P01909 254 aa13.76□□□□□ -0.21
PTMS-205ENST00000540828 INAFM2P0DMQ5 153 aa13.76□□□□□ -0.21
PTMS-205ENST00000540828 TMEM241Q24JQ0 296 aa13.76□□□□□ -0.21
PTMS-205ENST00000540828 TRAV8-4A0A0B4J246 113 aa13.75□□□□□ -0.21
PTMS-205ENST00000540828 C9JQL5 133 aa13.75□□□□□ -0.21
PTMS-205ENST00000540828 V9GYV3 84 aa13.75□□□□□ -0.21
PTMS-205ENST00000540828 UBE2L6O14933 153 aa13.74□□□□□ -0.21
PTMS-205ENST00000540828 NCR2O95944 276 aa13.74□□□□□ -0.21
PTMS-205ENST00000540828 ISOC2Q96AB3 205 aa13.74□□□□□ -0.21
PTMS-205ENST00000540828 TMEM191AQ9H0A3 160 aa13.74□□□□□ -0.21
PTMS-205ENST00000540828 SRRM2Q9UQ35 2752 aaKnown RBP13.74□□□□□ -0.21
PTMS-205ENST00000540828 TRBV6-5A0A0K0K1A5 114 aa13.73□□□□□ -0.21
PTMS-205ENST00000540828 PRSS1P07477 247 aa13.73□□□□□ -0.21
PTMS-205ENST00000540828 RPL23P62829 140 aaKnown RBP13.73□□□□□ -0.21
PTMS-205ENST00000540828 IGLV10-54A0A075B6I4 117 aa13.72□□□□□ -0.21
PTMS-205ENST00000540828 SDHAF1A6NFY7 115 aa13.72□□□□□ -0.21
PTMS-205ENST00000540828 SRSF3P84103 164 aaKnown RBP13.72□□□□□ -0.21
PTMS-205ENST00000540828 PEA15Q15121 130 aa13.72□□□□□ -0.21
PTMS-205ENST00000540828 RNF185Q96GF1 192 aa13.71□□□□□ -0.21
PTMS-205ENST00000540828 SMDT1Q9H4I9 107 aa13.71□□□□□ -0.21
PTMS-205ENST00000540828 GAS8-AS1O95177 125 aa13.7□□□□□ -0.22
PTMS-205ENST00000540828 RAB4AP20338 218 aa13.7□□□□□ -0.22
PTMS-205ENST00000540828 DGAT2L7PQ6IED9 249 aa13.7□□□□□ -0.22
PTMS-205ENST00000540828 NUP35Q8NFH5 326 aa13.7□□□□□ -0.22
PTMS-205ENST00000540828 NAT8Q9UHE5 227 aa13.7□□□□□ -0.22
PTMS-205ENST00000540828 H7C423 109 aa13.69□□□□□ -0.22
PTMS-205ENST00000540828 I3L3M4 83 aa13.69□□□□□ -0.22
PTMS-205ENST00000540828 PMCHP20382 165 aa13.69□□□□□ -0.22
PTMS-205ENST00000540828 RIGQ13278 110 aa13.69□□□□□ -0.22
PTMS-205ENST00000540828 CLRN3Q8NCR9 226 aa13.69□□□□□ -0.22
PTMS-205ENST00000540828 CHAC1Q9BUX1 264 aa13.69□□□□□ -0.22
PTMS-205ENST00000540828 APCSP02743 223 aa13.68□□□□□ -0.22
PTMS-205ENST00000540828 ADIRFQ15847 76 aa13.68□□□□□ -0.22
PTMS-205ENST00000540828 SCXQ7RTU7 201 aa13.68□□□□□ -0.22
PTMS-205ENST00000540828 MRAP2Q96G30 205 aa13.68□□□□□ -0.22
PTMS-205ENST00000540828 ST20Q9HBF5 79 aa13.68□□□□□ -0.22
PTMS-205ENST00000540828 AMN1Q8IY45 258 aa13.67□□□□□ -0.22
PTMS-205ENST00000540828 NAT8BQ9UHF3 227 aa13.67□□□□□ -0.22
PTMS-205ENST00000540828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.66□□□□□ -0.22
PTMS-205ENST00000540828 IGKV2-29A2NJV5 120 aaPredicted RBP13.66□□□□□ -0.22
PTMS-205ENST00000540828 POLR2KP53803 58 aaKnown RBP13.66□□□□□ -0.22
PTMS-205ENST00000540828 AMMECR1LQ6DCA0 310 aa13.66□□□□□ -0.22
PTMS-205ENST00000540828 C9orf163Q8N9P6 203 aa13.66□□□□□ -0.22
PTMS-205ENST00000540828 SMIM27A0A1W2PRY6 76 aa13.65□□□□□ -0.22
PTMS-205ENST00000540828 FGF6P10767 208 aa13.65□□□□□ -0.22
PTMS-205ENST00000540828 ESDP10768 282 aa13.65□□□□□ -0.22
PTMS-205ENST00000540828 RPS10P46783 165 aaKnown RBP13.65□□□□□ -0.22
PTMS-205ENST00000540828 TSHBP01222 138 aa13.64□□□□□ -0.23
PTMS-205ENST00000540828 RNASEKQ6P5S7 137 aaKnown RBP13.64□□□□□ -0.23
PTMS-205ENST00000540828 LINC00528Q8N1L1 170 aa13.64□□□□□ -0.23
PTMS-205ENST00000540828 CIRBP-AS1Q8TBR5 109 aa13.64□□□□□ -0.23
PTMS-205ENST00000540828 FLG2Q5D862 2391 aaPredicted RBP13.64□□□□□ -0.23
PTMS-205ENST00000540828 TRBV27A0A0K0K1C4 114 aa13.63□□□□□ -0.23
PTMS-205ENST00000540828 PLA2G1BP04054 148 aaKnown RBP13.63□□□□□ -0.23
PTMS-205ENST00000540828 GAGE12HA6NDE8 117 aa13.62□□□□□ -0.23
PTMS-205ENST00000540828 ZNF25P17030 456 aaPredicted RBP13.62□□□□□ -0.23
PTMS-205ENST00000540828 TMEM242Q9NWH2 141 aa13.62□□□□□ -0.23
PTMS-205ENST00000540828 IGKV3OR2-268A0A0C4DH90 116 aa13.61□□□□□ -0.23
PTMS-205ENST00000540828 hDV102S1A0JD36 115 aa13.61□□□□□ -0.23
PTMS-205ENST00000540828 SMKR1H3BMG3 65 aa13.61□□□□□ -0.23
PTMS-205ENST00000540828 CNBPP62633 177 aaKnown RBP13.61□□□□□ -0.23
PTMS-205ENST00000540828 VCYO14598 125 aa13.6□□□□□ -0.23
PTMS-205ENST00000540828 PPP1R17O96001 155 aa13.6□□□□□ -0.23
PTMS-205ENST00000540828 FAM104BQ5XKR9 115 aa13.6□□□□□ -0.23
PTMS-205ENST00000540828 SDIM1Q6ZPB5 146 aa13.6□□□□□ -0.23
PTMS-205ENST00000540828 NRACQ8N912 160 aa13.6□□□□□ -0.23
PTMS-205ENST00000540828 OR5A1Q8NGJ0 315 aa13.59□□□□□ -0.23
PTMS-205ENST00000540828 CHCHD10Q8WYQ3 142 aaPredicted RBP13.59□□□□□ -0.23
PTMS-205ENST00000540828 TMEM101Q96IK0 257 aa13.59□□□□□ -0.23
PTMS-205ENST00000540828 BTF3L4Q96K17 158 aa13.59□□□□□ -0.23
PTMS-205ENST00000540828 A0A1B0GW15 77 aa13.58□□□□□ -0.24
PTMS-205ENST00000540828 SLPIP03973 132 aa13.58□□□□□ -0.24
PTMS-205ENST00000540828 MRPL51Q4U2R6 128 aaKnown RBP13.58□□□□□ -0.24
PTMS-205ENST00000540828 CFAP161Q6P656 301 aa13.58□□□□□ -0.24
PTMS-205ENST00000540828 AP5S1Q9NUS5 200 aa13.58□□□□□ -0.24
PTMS-205ENST00000540828 CAMPP49913 170 aa13.57□□□□□ -0.24
PTMS-205ENST00000540828 SUMO2P61956 95 aaKnown RBP13.57□□□□□ -0.24
PTMS-205ENST00000540828 MRPL52Q86TS9 123 aaKnown RBP13.57□□□□□ -0.24
PTMS-205ENST00000540828 C15orf56Q8N910 161 aa13.57□□□□□ -0.24
PTMS-205ENST00000540828 MYCBP2O75592 4640 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms