RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 VAMP3Q15836 100 aa6.89□□□□□ -1.31
LCOR-209ENST00000540664 NDUFA11Q86Y39 141 aa6.89□□□□□ -1.31
LCOR-209ENST00000540664 OPRPNQ99935 248 aaPredicted RBP6.89□□□□□ -1.31
LCOR-209ENST00000540664 NIPBLQ6KC79 2804 aaeCLIP6.89□□□□□ -1.31
LCOR-209ENST00000540664 NOTCH2Q04721 2471 aa6.89□□□□□ -1.31
LCOR-209ENST00000540664 SETXQ7Z333 2677 aaKnown RBP6.89□□□□□ -1.31
LCOR-209ENST00000540664 GCSHP23434 173 aa6.88□□□□□ -1.31
LCOR-209ENST00000540664 AMMECR1LQ6DCA0 310 aa6.88□□□□□ -1.31
LCOR-209ENST00000540664 TMEM263Q8WUH6 116 aaKnown RBP6.88□□□□□ -1.31
LCOR-209ENST00000540664 AMELXQ99217 191 aa6.88□□□□□ -1.31
LCOR-209ENST00000540664 CHCHD7Q9BUK0 85 aa6.88□□□□□ -1.31
LCOR-209ENST00000540664 K7EP13 123 aa6.88□□□□□ -1.31
LCOR-209ENST00000540664 EMP1P54849 157 aa6.88□□□□□ -1.31
LCOR-209ENST00000540664 PHLDA1Q8WV24 401 aaPredicted RBP6.88□□□□□ -1.31
LCOR-209ENST00000540664 WNK1Q9H4A3 2382 aa6.88□□□□□ -1.31
LCOR-209ENST00000540664 HERVK_113P61574 105 aa6.87□□□□□ -1.31
LCOR-209ENST00000540664 SMIM13P0DJ93 91 aa6.86□□□□□ -1.31
LCOR-209ENST00000540664 DAZ2Q13117 558 aaKnown RBP6.86□□□□□ -1.31
LCOR-209ENST00000540664 CSNK1G2-AS1Q8NCQ2 148 aa6.86□□□□□ -1.31
LCOR-209ENST00000540664 IGHV3OR16-12A0A075B7B8 117 aa6.86□□□□□ -1.31
LCOR-209ENST00000540664 PLAC8L1A1L4L8 177 aa6.86□□□□□ -1.31
LCOR-209ENST00000540664 ZNF815PA8K554 130 aa6.86□□□□□ -1.31
LCOR-209ENST00000540664 LINC00482Q8N8I6 264 aa6.86□□□□□ -1.31
LCOR-209ENST00000540664 WFDC10AQ9H1F0 79 aa6.86□□□□□ -1.31
LCOR-209ENST00000540664 VCX2Q9H322 139 aa6.86□□□□□ -1.31
LCOR-209ENST00000540664 A0A1B0GWB2 263 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 TMEM223A0PJW6 202 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 ZNF22P17026 224 aaPredicted RBP6.85□□□□□ -1.31
LCOR-209ENST00000540664 TSPEAR-AS2P59090 65 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 OR4C5Q8NGB2 326 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 SPANXA1Q9NS26 97 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 UBE2D4Q9Y2X8 147 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 TRGV1A0A0A0MS02 117 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 TRAV4A0A0B4J268 109 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 H3BUT2 72 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 MRPS36P82909 103 aaKnown RBP6.85□□□□□ -1.31
LCOR-209ENST00000540664 TMEM170BQ5T4T1 132 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 Q6ZTI0 123 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 HIST1H4GQ99525 98 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 C1QTNF4Q9BXJ3 329 aa6.85□□□□□ -1.31
LCOR-209ENST00000540664 SETD2Q9BYW2 2564 aaPredicted RBP6.85□□□□□ -1.31
LCOR-209ENST00000540664 TRBV10-1A0A0K0K1A3 114 aa6.84□□□□□ -1.31
LCOR-209ENST00000540664 OR5A1Q8NGJ0 315 aa6.84□□□□□ -1.31
LCOR-209ENST00000540664 RAB37Q96AX2 223 aa6.84□□□□□ -1.31
LCOR-209ENST00000540664 C16orf74Q96GX8 76 aa6.84□□□□□ -1.31
LCOR-209ENST00000540664 ZNF479Q96JC4 524 aa6.84□□□□□ -1.31
LCOR-209ENST00000540664 OVOL2Q9BRP0 275 aa6.84□□□□□ -1.31
LCOR-209ENST00000540664 A0A0J9YXV3 536 aa6.84□□□□□ -1.32
LCOR-209ENST00000540664 A0A0J9YY99 117 aa6.84□□□□□ -1.32
LCOR-209ENST00000540664 A0A1W2PPM0 123 aa6.84□□□□□ -1.32
LCOR-209ENST00000540664 LEPROTO15243 131 aa6.84□□□□□ -1.32
LCOR-209ENST00000540664 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.32
LCOR-209ENST00000540664 FN1P02751 2386 aaKnown RBP6.83□□□□□ -1.32
LCOR-209ENST00000540664 J3QQQ9 107 aa6.83□□□□□ -1.32
LCOR-209ENST00000540664 K7EP34 96 aa6.83□□□□□ -1.32
LCOR-209ENST00000540664 K7ERJ3 54 aa6.83□□□□□ -1.32
LCOR-209ENST00000540664 CRLF1O75462 422 aa6.83□□□□□ -1.32
LCOR-209ENST00000540664 RPL35AP18077 110 aaKnown RBP6.83□□□□□ -1.32
LCOR-209ENST00000540664 COTL1Q14019 142 aa6.83□□□□□ -1.32
LCOR-209ENST00000540664 C12orf74Q32Q52 190 aa6.83□□□□□ -1.32
LCOR-209ENST00000540664 TIMM21Q9BVV7 248 aa6.83□□□□□ -1.32
LCOR-209ENST00000540664 NSD1Q96L73 2696 aaPredicted RBP6.83□□□□□ -1.32
LCOR-209ENST00000540664 GAGE10A6NGK3 116 aa6.82□□□□□ -1.32
LCOR-209ENST00000540664 K7EQD1 137 aa6.82□□□□□ -1.32
LCOR-209ENST00000540664 CEMP1Q6PRD7 247 aaPredicted RBP6.82□□□□□ -1.32
LCOR-209ENST00000540664 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
LCOR-209ENST00000540664 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.82□□□□□ -1.32
LCOR-209ENST00000540664 IGHV3-38A0A0C4DH36 116 aa6.82□□□□□ -1.32
LCOR-209ENST00000540664 IGKV2-29A2NJV5 120 aaPredicted RBP6.82□□□□□ -1.32
LCOR-209ENST00000540664 CIDEAO60543 219 aa6.82□□□□□ -1.32
LCOR-209ENST00000540664 SAMD5Q5TGI4 173 aa6.82□□□□□ -1.32
LCOR-209ENST00000540664 SCGB1D4Q6XE38 83 aa6.82□□□□□ -1.32
LCOR-209ENST00000540664 GTF2H5Q6ZYL4 71 aa6.82□□□□□ -1.32
LCOR-209ENST00000540664 NAA38Q9BRA0 125 aaKnown RBP6.82□□□□□ -1.32
LCOR-209ENST00000540664 NOP10Q9NPE3 64 aaKnown RBP6.82□□□□□ -1.32
LCOR-209ENST00000540664 HIVEP1P15822 2718 aa6.82□□□□□ -1.32
LCOR-209ENST00000540664 TINCRA0A1B0GVN0 87 aa6.81□□□□□ -1.32
LCOR-209ENST00000540664 PF4P02776 101 aa6.81□□□□□ -1.32
LCOR-209ENST00000540664 SLC25A29Q8N8R3 303 aa6.81□□□□□ -1.32
LCOR-209ENST00000540664 IGLL5B9A064 214 aa6.81□□□□□ -1.32
LCOR-209ENST00000540664 UBE2D3P61077 147 aa6.81□□□□□ -1.32
LCOR-209ENST00000540664 UBE2D2P62837 147 aa6.81□□□□□ -1.32
LCOR-209ENST00000540664 RPL36AP83881 106 aaKnown RBP6.81□□□□□ -1.32
LCOR-209ENST00000540664 DAZ4Q86SG3 579 aaKnown RBP6.81□□□□□ -1.32
LCOR-209ENST00000540664 RPL36ALQ969Q0 106 aaKnown RBP6.81□□□□□ -1.32
LCOR-209ENST00000540664 DAZ3Q9NR90 486 aaKnown RBP6.81□□□□□ -1.32
LCOR-209ENST00000540664 FABP2P12104 132 aa6.8□□□□□ -1.32
LCOR-209ENST00000540664 LGALS3P17931 250 aaKnown RBP6.8□□□□□ -1.32
LCOR-209ENST00000540664 INSL3P51460 131 aa6.8□□□□□ -1.32
LCOR-209ENST00000540664 UBE2D1P51668 147 aa6.8□□□□□ -1.32
LCOR-209ENST00000540664 RRN3P1Q2M238 152 aa6.8□□□□□ -1.32
LCOR-209ENST00000540664 Q6ZUT4 128 aa6.8□□□□□ -1.32
LCOR-209ENST00000540664 SBSPONQ8IVN8 264 aa6.8□□□□□ -1.32
LCOR-209ENST00000540664 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
LCOR-209ENST00000540664 CSDC2Q9Y534 153 aaKnown RBP6.8□□□□□ -1.32
LCOR-209ENST00000540664 SPCS1Q9Y6A9 102 aa6.8□□□□□ -1.32
LCOR-209ENST00000540664 C2CD3Q4AC94 2353 aa6.8□□□□□ -1.32
LCOR-209ENST00000540664 TRBV6-4A0A1B0GX49 114 aa6.79□□□□□ -1.32
LCOR-209ENST00000540664 GAGE12BA1L429 117 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms