RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 Q8N3U1 123 aa10.09□□□□□ -0.79
MDM1-210ENST00000540418 C20orf78Q9BR46 151 aa10.09□□□□□ -0.79
MDM1-210ENST00000540418 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
MDM1-210ENST00000540418 TNFRSF6BO95407 300 aa10.09□□□□□ -0.79
MDM1-210ENST00000540418 ATRAIDQ6UW56 229 aa10.09□□□□□ -0.79
MDM1-210ENST00000540418 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
MDM1-210ENST00000540418 AMTP48728 403 aa10.08□□□□□ -0.8
MDM1-210ENST00000540418 IBA57-AS1B1ANH7 110 aa10.08□□□□□ -0.8
MDM1-210ENST00000540418 PHOX2AO14813 284 aa10.08□□□□□ -0.8
MDM1-210ENST00000540418 RTL8CO15255 209 aa10.08□□□□□ -0.8
MDM1-210ENST00000540418 COX19Q49B96 90 aa10.08□□□□□ -0.8
MDM1-210ENST00000540418 GNB1LQ9BYB4 327 aa10.08□□□□□ -0.8
MDM1-210ENST00000540418 PRELID3AQ96N28 172 aa10.07□□□□□ -0.8
MDM1-210ENST00000540418 NPYP01303 97 aa10.07□□□□□ -0.8
MDM1-210ENST00000540418 RPL32P62910 135 aaKnown RBP10.07□□□□□ -0.8
MDM1-210ENST00000540418 GAGE6Q13070 117 aa10.07□□□□□ -0.8
MDM1-210ENST00000540418 ELOBQ15370 118 aa10.07□□□□□ -0.8
MDM1-210ENST00000540418 TSHBP01222 138 aa10.06□□□□□ -0.8
MDM1-210ENST00000540418 HLA-DQA1P01909 254 aa10.06□□□□□ -0.8
MDM1-210ENST00000540418 LAMTOR2Q9Y2Q5 125 aa10.06□□□□□ -0.8
MDM1-210ENST00000540418 APCSP02743 223 aa10.06□□□□□ -0.8
MDM1-210ENST00000540418 LINC00336Q6ZUF6 198 aa10.06□□□□□ -0.8
MDM1-210ENST00000540418 NFE4Q86UQ8 179 aa10.06□□□□□ -0.8
MDM1-210ENST00000540418 TGIF2-C20orf24A0A0A6YYL0 155 aa10.05□□□□□ -0.8
MDM1-210ENST00000540418 UBE2L6O14933 153 aa10.05□□□□□ -0.8
MDM1-210ENST00000540418 LAGE3Q14657 143 aa10.05□□□□□ -0.8
MDM1-210ENST00000540418 MPV17L2Q567V2 206 aa10.05□□□□□ -0.8
MDM1-210ENST00000540418 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
MDM1-210ENST00000540418 KLK12Q9UKR0 248 aa10.04□□□□□ -0.8
MDM1-210ENST00000540418 MT-ND6P03923 174 aa10.04□□□□□ -0.8
MDM1-210ENST00000540418 FCER1GP30273 86 aa10.04□□□□□ -0.8
MDM1-210ENST00000540418 RBX1P62877 108 aa10.04□□□□□ -0.8
MDM1-210ENST00000540418 Q8N976 141 aa10.04□□□□□ -0.8
MDM1-210ENST00000540418 A0A1B0GUV1 79 aa10.03□□□□□ -0.8
MDM1-210ENST00000540418 PRSS47A8MTI9 375 aa10.03□□□□□ -0.8
MDM1-210ENST00000540418 H7C423 109 aa10.03□□□□□ -0.8
MDM1-210ENST00000540418 ESDP10768 282 aa10.03□□□□□ -0.8
MDM1-210ENST00000540418 SMIM2Q9BVW6 85 aa10.03□□□□□ -0.8
MDM1-210ENST00000540418 SMCO4Q9NRQ5 59 aa10.03□□□□□ -0.8
MDM1-210ENST00000540418 TRAV8-3A0A0A6YYJ7 113 aa10.02□□□□□ -0.8
MDM1-210ENST00000540418 TCAPO15273 167 aa10.02□□□□□ -0.8
MDM1-210ENST00000540418 ANGP03950 147 aaKnown RBP10.02□□□□□ -0.8
MDM1-210ENST00000540418 KIAA1644Q3SXP7 199 aa10.02□□□□□ -0.8
MDM1-210ENST00000540418 Q6ZRN7 208 aaPredicted RBP10.02□□□□□ -0.8
MDM1-210ENST00000540418 YPEL4Q96NS1 127 aa10.02□□□□□ -0.8
MDM1-210ENST00000540418 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
MDM1-210ENST00000540418 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
MDM1-210ENST00000540418 PRSS29PA6NIE9 313 aa10.02□□□□□ -0.81
MDM1-210ENST00000540418 MRPL18Q9H0U6 180 aaKnown RBP10.02□□□□□ -0.81
MDM1-210ENST00000540418 MAP1LC3AQ9H492 121 aa10.02□□□□□ -0.81
MDM1-210ENST00000540418 Q9HAA7 133 aa10.02□□□□□ -0.81
MDM1-210ENST00000540418 DNAH2Q9P225 4427 aa10.01□□□□□ -0.81
MDM1-210ENST00000540418 CBLN2Q8IUK8 224 aa10.01□□□□□ -0.81
MDM1-210ENST00000540418 LOC389332A0A1B0GUA5 103 aa10□□□□□ -0.81
MDM1-210ENST00000540418 Q0VG73 95 aa10□□□□□ -0.81
MDM1-210ENST00000540418 FABP9Q0Z7S8 132 aa10□□□□□ -0.81
MDM1-210ENST00000540418 UBE2WQ96B02 151 aa10□□□□□ -0.81
MDM1-210ENST00000540418 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
MDM1-210ENST00000540418 TRAPPC1Q9Y5R8 145 aa10□□□□□ -0.81
MDM1-210ENST00000540418 IGLV4-60A0A075B6I1 120 aa9.99□□□□□ -0.81
MDM1-210ENST00000540418 FGF6P10767 208 aa9.99□□□□□ -0.81
MDM1-210ENST00000540418 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
MDM1-210ENST00000540418 C20orf203Q8NBC4 194 aa9.99□□□□□ -0.81
MDM1-210ENST00000540418 RAB5AP20339 215 aa9.99□□□□□ -0.81
MDM1-210ENST00000540418 TNP2Q05952 138 aa9.99□□□□□ -0.81
MDM1-210ENST00000540418 LINC00269Q8N2A0 174 aa9.99□□□□□ -0.81
MDM1-210ENST00000540418 ALKBH7Q9BT30 221 aaPredicted RBP9.99□□□□□ -0.81
MDM1-210ENST00000540418 PRR34Q9NV39 138 aa9.99□□□□□ -0.81
MDM1-210ENST00000540418 CRPP02741 224 aa9.98□□□□□ -0.81
MDM1-210ENST00000540418 ZNF25P17030 456 aaPredicted RBP9.98□□□□□ -0.81
MDM1-210ENST00000540418 RNASEKQ6P5S7 137 aaKnown RBP9.98□□□□□ -0.81
MDM1-210ENST00000540418 Q8N8P6 123 aa9.98□□□□□ -0.81
MDM1-210ENST00000540418 TM2D2Q9BX73 214 aa9.98□□□□□ -0.81
MDM1-210ENST00000540418 RMI2Q96E14 147 aa9.98□□□□□ -0.81
MDM1-210ENST00000540418 DNAH10Q8IVF4 4471 aa9.98□□□□□ -0.81
MDM1-210ENST00000540418 MRPL52Q86TS9 123 aaKnown RBP9.97□□□□□ -0.81
MDM1-210ENST00000540418 TMEM18Q96B42 140 aa9.97□□□□□ -0.81
MDM1-210ENST00000540418 FRAS1Q86XX4 4008 aa9.97□□□□□ -0.81
MDM1-210ENST00000540418 TMEM101Q96IK0 257 aa9.97□□□□□ -0.81
MDM1-210ENST00000540418 NXT2Q9NPJ8 142 aaKnown RBP9.97□□□□□ -0.81
MDM1-210ENST00000540418 COX11Q9Y6N1 276 aa9.97□□□□□ -0.81
MDM1-210ENST00000540418 PSCAO43653 123 aa9.96□□□□□ -0.81
MDM1-210ENST00000540418 REG3AQ06141 175 aa9.96□□□□□ -0.81
MDM1-210ENST00000540418 SMAGPQ0VAQ4 97 aa9.96□□□□□ -0.81
MDM1-210ENST00000540418 MIAQ16674 131 aa9.96□□□□□ -0.81
MDM1-210ENST00000540418 K7EMI3 77 aa9.95□□□□□ -0.82
MDM1-210ENST00000540418 IFI27P40305 119 aaPredicted RBP9.95□□□□□ -0.82
MDM1-210ENST00000540418 CLPSL2Q6UWE3 100 aa9.95□□□□□ -0.82
MDM1-210ENST00000540418 OR5A1Q8NGJ0 315 aa9.95□□□□□ -0.82
MDM1-210ENST00000540418 IGKV2D-24A0A075B6R9 120 aa9.95□□□□□ -0.82
MDM1-210ENST00000540418 CSDC2Q9Y534 153 aaKnown RBP9.95□□□□□ -0.82
MDM1-210ENST00000540418 C1orf43Q9BWL3 253 aa9.94□□□□□ -0.82
MDM1-210ENST00000540418 UBE2D4Q9Y2X8 147 aa9.94□□□□□ -0.82
MDM1-210ENST00000540418 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
MDM1-210ENST00000540418 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
MDM1-210ENST00000540418 PRSS3P2Q8NHM4 247 aa9.94□□□□□ -0.82
MDM1-210ENST00000540418 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
MDM1-210ENST00000540418 ORMDL2Q53FV1 153 aa9.93□□□□□ -0.82
MDM1-210ENST00000540418 CDC42SE2Q9NRR3 84 aa9.93□□□□□ -0.82
MDM1-210ENST00000540418 TRAV8-4A0A0B4J246 113 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms