RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TRBV6-5A0A0K0K1A5 114 aa12.1□□□□□ -0.47
SNRPA1-203ENST00000540017 SMKR1H3BMG3 65 aa12.1□□□□□ -0.47
SNRPA1-203ENST00000540017 CDPF1Q6NVV7 123 aa12.1□□□□□ -0.47
SNRPA1-203ENST00000540017 Q8N814 137 aa12.1□□□□□ -0.47
SNRPA1-203ENST00000540017 BAALCQ8WXS3 180 aa12.1□□□□□ -0.47
SNRPA1-203ENST00000540017 IGLV4-60A0A075B6I1 120 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 NCR2O95944 276 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 AMTP48728 403 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 CAMPP49913 170 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 Q0VG73 95 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 LINC00269Q8N2A0 174 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 C20orf203Q8NBC4 194 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 RMI2Q96E14 147 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 MRAP2Q96G30 205 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 KRTAP17-1Q9BYP8 105 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 PRR34Q9NV39 138 aa12.09□□□□□ -0.47
SNRPA1-203ENST00000540017 CDK2AP2O75956 126 aa12.08□□□□□ -0.48
SNRPA1-203ENST00000540017 FAM104BQ5XKR9 115 aa12.08□□□□□ -0.48
SNRPA1-203ENST00000540017 MRPL54Q6P161 138 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-203ENST00000540017 COX11Q9Y6N1 276 aa12.08□□□□□ -0.48
SNRPA1-203ENST00000540017 CRPP02741 224 aa12.07□□□□□ -0.48
SNRPA1-203ENST00000540017 ADCYAP1P18509 176 aa12.07□□□□□ -0.48
SNRPA1-203ENST00000540017 KRTAP10-1P60331 282 aa12.07□□□□□ -0.48
SNRPA1-203ENST00000540017 PNRC1Q12796 327 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-203ENST00000540017 TMEM70Q9BUB7 260 aa12.07□□□□□ -0.48
SNRPA1-203ENST00000540017 ST20Q9HBF5 79 aa12.07□□□□□ -0.48
SNRPA1-203ENST00000540017 A0A1B0GUV1 79 aa12.06□□□□□ -0.48
SNRPA1-203ENST00000540017 A0A1B0GXF2 115 aa12.06□□□□□ -0.48
SNRPA1-203ENST00000540017 POLR2KP53803 58 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-203ENST00000540017 MRPL51Q4U2R6 128 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-203ENST00000540017 NRACQ8N912 160 aa12.06□□□□□ -0.48
SNRPA1-203ENST00000540017 C1orf43Q9BWL3 253 aa12.06□□□□□ -0.48
SNRPA1-203ENST00000540017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-203ENST00000540017 A0A1B0GW15 77 aa12.05□□□□□ -0.48
SNRPA1-203ENST00000540017 IGKV2-29A2NJV5 120 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-203ENST00000540017 I3L3M4 83 aa12.05□□□□□ -0.48
SNRPA1-203ENST00000540017 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
SNRPA1-203ENST00000540017 TSHBP01222 138 aa12.05□□□□□ -0.48
SNRPA1-203ENST00000540017 PMCHP20382 165 aa12.05□□□□□ -0.48
SNRPA1-203ENST00000540017 MIAQ16674 131 aa12.05□□□□□ -0.48
SNRPA1-203ENST00000540017 KRTAP26-1Q6PEX3 210 aa12.05□□□□□ -0.48
SNRPA1-203ENST00000540017 IGLV5-52A0A0A0MRZ9 124 aa12.04□□□□□ -0.48
SNRPA1-203ENST00000540017 UBE2L6O14933 153 aa12.04□□□□□ -0.48
SNRPA1-203ENST00000540017 APCSP02743 223 aa12.04□□□□□ -0.48
SNRPA1-203ENST00000540017 HBBP68871 147 aa12.04□□□□□ -0.48
SNRPA1-203ENST00000540017 REG3AQ06141 175 aa12.04□□□□□ -0.48
SNRPA1-203ENST00000540017 UQCC3Q6UW78 93 aa12.04□□□□□ -0.48
SNRPA1-203ENST00000540017 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-203ENST00000540017 TMEM242Q9NWH2 141 aa12.04□□□□□ -0.48
SNRPA1-203ENST00000540017 TRBV27A0A0K0K1C4 114 aa12.03□□□□□ -0.48
SNRPA1-203ENST00000540017 TMEM218A2RU14 115 aa12.03□□□□□ -0.48
SNRPA1-203ENST00000540017 MT-ND4LP03901 98 aa12.03□□□□□ -0.48
SNRPA1-203ENST00000540017 GCSHP23434 173 aa12.03□□□□□ -0.48
SNRPA1-203ENST00000540017 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.02□□□□□ -0.49
SNRPA1-203ENST00000540017 ANAPC16Q96DE5 110 aa12.02□□□□□ -0.49
SNRPA1-203ENST00000540017 IGLV10-54A0A075B6I4 117 aa12.01□□□□□ -0.49
SNRPA1-203ENST00000540017 ESDP10768 282 aa12.01□□□□□ -0.49
SNRPA1-203ENST00000540017 COMMD7Q86VX2 200 aa12.01□□□□□ -0.49
SNRPA1-203ENST00000540017 F8W036 122 aa12□□□□□ -0.49
SNRPA1-203ENST00000540017 HLA-DQA1P01909 254 aa12□□□□□ -0.49
SNRPA1-203ENST00000540017 SUMO2P61956 95 aaKnown RBP12□□□□□ -0.49
SNRPA1-203ENST00000540017 ATP5L2Q7Z4Y8 100 aa12□□□□□ -0.49
SNRPA1-203ENST00000540017 LINC00862A6NCI5 91 aa11.99□□□□□ -0.49
SNRPA1-203ENST00000540017 H7C423 109 aa11.99□□□□□ -0.49
SNRPA1-203ENST00000540017 S100A8P05109 93 aa11.99□□□□□ -0.49
SNRPA1-203ENST00000540017 FGF6P10767 208 aa11.99□□□□□ -0.49
SNRPA1-203ENST00000540017 CKS2P33552 79 aa11.99□□□□□ -0.49
SNRPA1-203ENST00000540017 XGP55808 180 aa11.99□□□□□ -0.49
SNRPA1-203ENST00000540017 KRTAP4-5Q9BYR2 181 aa11.99□□□□□ -0.49
SNRPA1-203ENST00000540017 TRBV24-1A0A075B6N3 115 aa11.98□□□□□ -0.49
SNRPA1-203ENST00000540017 D6R8Y8 96 aa11.98□□□□□ -0.49
SNRPA1-203ENST00000540017 VCYO14598 125 aa11.98□□□□□ -0.49
SNRPA1-203ENST00000540017 PPP1R17O96001 155 aa11.98□□□□□ -0.49
SNRPA1-203ENST00000540017 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
SNRPA1-203ENST00000540017 RNASEKQ6P5S7 137 aaKnown RBP11.98□□□□□ -0.49
SNRPA1-203ENST00000540017 USP17L23D6RBM5 183 aa11.97□□□□□ -0.49
SNRPA1-203ENST00000540017 TNFRSF6BO95407 300 aa11.97□□□□□ -0.49
SNRPA1-203ENST00000540017 SEC11CQ9BY50 192 aa11.97□□□□□ -0.49
SNRPA1-203ENST00000540017 PCLOQ9Y6V0 5065 aa11.97□□□□□ -0.49
SNRPA1-203ENST00000540017 TRAV8-4A0A0B4J246 113 aa11.96□□□□□ -0.49
SNRPA1-203ENST00000540017 IGKV3OR2-268A0A0C4DH90 116 aa11.96□□□□□ -0.49
SNRPA1-203ENST00000540017 NPYP01303 97 aa11.96□□□□□ -0.49
SNRPA1-203ENST00000540017 LINC01620Q4KN68 170 aa11.96□□□□□ -0.49
SNRPA1-203ENST00000540017 C20orf78Q9BR46 151 aa11.96□□□□□ -0.49
SNRPA1-203ENST00000540017 FAM30AQ9NZY2 134 aa11.95□□□□□ -0.5
SNRPA1-203ENST00000540017 DNAH8Q96JB1 4490 aa11.95□□□□□ -0.5
SNRPA1-203ENST00000540017 C7orf77A4D0Y5 90 aa11.94□□□□□ -0.5
SNRPA1-203ENST00000540017 PRSS1P07477 247 aa11.94□□□□□ -0.5
SNRPA1-203ENST00000540017 ZNF25P17030 456 aaPredicted RBP11.94□□□□□ -0.5
SNRPA1-203ENST00000540017 FCER1GP30273 86 aa11.94□□□□□ -0.5
SNRPA1-203ENST00000540017 RPL32P62910 135 aaKnown RBP11.94□□□□□ -0.5
SNRPA1-203ENST00000540017 HAMPP81172 84 aa11.94□□□□□ -0.5
SNRPA1-203ENST00000540017 ABCA13Q86UQ4 5058 aa11.93□□□□□ -0.5
SNRPA1-203ENST00000540017 MRPL52Q86TS9 123 aaKnown RBP11.93□□□□□ -0.5
SNRPA1-203ENST00000540017 BTF3L4Q96K17 158 aa11.93□□□□□ -0.5
SNRPA1-203ENST00000540017 KIR2DL4Q99706 377 aa11.93□□□□□ -0.5
SNRPA1-203ENST00000540017 PPBPP02775 128 aa11.92□□□□□ -0.5
SNRPA1-203ENST00000540017 C14orf177Q52M58 125 aa11.92□□□□□ -0.5
SNRPA1-203ENST00000540017 C10orf91Q5T1B1 145 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms