RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 ENHOQ6UWT2 76 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 NPBQ8NG41 125 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 ITLN2Q8WWU7 325 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-211ENST00000539921 RBM12B-AS1Q9P1G2 102 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 KAAG1Q9UBP8 84 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 TRIOBPQ9H2D6 2365 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 NACAE9PAV3 2078 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 hDV103S1A0JD37 113 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 PRAC2D3DTV9 90 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 M0QY20 66 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 PRYO14603 147 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 UBE2L6O14933 153 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 ZNHIT1O43257 154 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 IGLV1-47P01700 117 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 VPREB1P12018 145 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 IGHV1-2P23083 117 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 FUSP35637 526 aaKnown RBP eCLIP4.42□□□□□ -1.7
SNHG1-211ENST00000539921 LPAL2Q16609 132 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 ECSCRQ19T08 205 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 DEFB133Q30KQ1 61 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 RMI2Q96E14 147 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 OPRPNQ99935 248 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-211ENST00000539921 LINC00588Q9Y4M8 146 aa4.42□□□□□ -1.7
SNHG1-211ENST00000539921 LY6G6DO95868 133 aa4.41□□□□□ -1.7
SNHG1-211ENST00000539921 DEFB114Q30KQ6 69 aa4.41□□□□□ -1.7
SNHG1-211ENST00000539921 C9orf66Q5T8R8 295 aa4.41□□□□□ -1.7
SNHG1-211ENST00000539921 ATP11AUNQ6ZP68 121 aa4.41□□□□□ -1.7
SNHG1-211ENST00000539921 Q6ZSV7 163 aa4.41□□□□□ -1.7
SNHG1-211ENST00000539921 Q6ZTC4 211 aa4.41□□□□□ -1.7
SNHG1-211ENST00000539921 C6orf223Q8N319 242 aa4.41□□□□□ -1.7
SNHG1-211ENST00000539921 C9orf106Q8NAJ2 232 aa4.41□□□□□ -1.7
SNHG1-211ENST00000539921 CDH23Q9H251 3354 aa4.4□□□□□ -1.7
SNHG1-211ENST00000539921 SZT2Q5T011 3432 aa4.4□□□□□ -1.7
SNHG1-211ENST00000539921 ARFGEF3Q5TH69 2177 aa4.4□□□□□ -1.7
SNHG1-211ENST00000539921 LAMA2P24043 3122 aaKnown RBP4.4□□□□□ -1.7
SNHG1-211ENST00000539921 IGHV3-21A0A0B4J1V1 117 aa4.4□□□□□ -1.71
SNHG1-211ENST00000539921 IGHV3-64DA0A0J9YX35 117 aa4.4□□□□□ -1.71
SNHG1-211ENST00000539921 LCE6AA0A183 80 aa4.4□□□□□ -1.71
SNHG1-211ENST00000539921 IGHV1-8P0DP01 117 aa4.4□□□□□ -1.71
SNHG1-211ENST00000539921 APOC4P55056 127 aa4.4□□□□□ -1.71
SNHG1-211ENST00000539921 LINC01547P58512 204 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-211ENST00000539921 NREPQ16612 68 aa4.4□□□□□ -1.71
SNHG1-211ENST00000539921 MIR7-3HGQ8N6C7 128 aa4.4□□□□□ -1.71
SNHG1-211ENST00000539921 CYP4F30PQ9H0H9 118 aa4.4□□□□□ -1.71
SNHG1-211ENST00000539921 A0A087WZ39 114 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 KLLNB2CW77 178 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 M0R378 163 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 LY6HO94772 140 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 UBE2AP49459 152 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 SOSTDC1Q6X4U4 206 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 Q8N6K4 173 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 FAM104AQ969W3 186 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 UBE2E2Q96LR5 201 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 RPP25Q9BUL9 199 aaKnown RBP4.39□□□□□ -1.71
SNHG1-211ENST00000539921 TTTY12Q9BZ98 90 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 BPESC1Q9GZL8 116 aa4.39□□□□□ -1.71
SNHG1-211ENST00000539921 COL27A1Q8IZC6 1860 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-211ENST00000539921 FREM1Q5H8C1 2179 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 IGHV3-64A0A075B6Q5 118 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 A0A087X002 238 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 LOC100131303A0A0U1RQF7 123 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 IGKV2-29A2NJV5 120 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-211ENST00000539921 PINLYPA6NC86 204 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 PRR9Q5T870 116 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-211ENST00000539921 MPLKIPQ8TAP9 179 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 Q9H8V8 135 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 Q9HAA7 133 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 ZNF580Q9UK33 172 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 SNURFQ9Y675 71 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 CHD9Q3L8U1 2897 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 TRANK1O15050 2925 aa4.38□□□□□ -1.71
SNHG1-211ENST00000539921 PI4KAP42356 2102 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 A0A087WYN8 130 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 TFF2Q03403 129 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 FAM229BQ4G0N7 80 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 Q6ZQT0 140 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 C11orf44Q8N8P7 122 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 Q8NA96 180 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 SMIM11BQ8TCY0 68 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 ESM1Q9NQ30 184 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 ZNRD1Q9P1U0 126 aa4.37□□□□□ -1.71
SNHG1-211ENST00000539921 CACNA1GO43497 2377 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 PRR14LQ5THK1 2151 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 CLPSL1A2RUU4 121 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 SMIM1B2RUZ4 78 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 F5H697 171 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 NCR3O14931 201 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 LECT2O14960 151 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 ZNF73O43830 326 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-211ENST00000539921 IGHV1-46P01743 117 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 CCL4P13236 92 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 CCL3L1P16619 93 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 C9orf129Q5T035 196 aaKnown RBP4.36□□□□□ -1.71
SNHG1-211ENST00000539921 UNQ9165/PRO28630Q6UXU0 137 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 Q6ZRP5 223 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 C7orf65Q6ZTY9 151 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 LCA10Q71F78 164 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 Q8N3U1 123 aa4.36□□□□□ -1.71
SNHG1-211ENST00000539921 LINC00337Q8N6G1 96 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms