RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 RPL27AP46776 148 aaKnown RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 RUSC1-AS1Q66K80 236 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 HCP5Q6MZN7 132 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 DYNAPQ8N1N2 210 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 MRPL36Q9P0J6 103 aaKnown RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 NAV3Q8IVL0 2385 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 ODF3BA8MYP8 253 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TEX22C9J3V5 150 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 I3L3M4 83 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 RNF5Q99942 180 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 SPTBN1Q01082 2364 aaKnown RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 RBMY1BA6NDE4 496 aaKnown RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 RBMY1EA6NEQ0 496 aaKnown RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 RBMY1DP0C7P1 496 aaKnown RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 RBMY1A1P0DJD3 496 aaKnown RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 RBMY1CP0DJD4 496 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 EGR2P11161 476 aaPredicted RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 ZFP36P26651 326 aaKnown RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 PLGLAQ15195 96 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 RBMY1FQ15415 496 aaKnown RBP4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 Q1RN00 199 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 FANCD2OSQ96PS1 177 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 DPM3Q9P2X0 92 aa4.26□□□□□ -1.73
RAB3GAP1-207ENST00000539493 PDE6HQ13956 83 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 Q8N2B8 174 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 C8orf49Q96NF6 230 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 M0R381 172 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 PRSS2P07478 247 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 GATA1P15976 413 aaPredicted RBP4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 VMO1Q7Z5L0 202 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 CLEC2BQ92478 149 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TMEM141Q96I45 108 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TM2D3Q9BRN9 247 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 DAZ3Q9NR90 486 aaKnown RBP4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 IGSF10Q6WRI0 2623 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 PLXNB1O43157 2135 aa4.25□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 IGHV1-58A0A0C4DH39 117 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 RNF223E7ERA6 249 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 COX7A2LO14548 114 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 SAA4P35542 130 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 MSRB1Q9NZV6 116 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 ARHGAP32A7KAX9 2087 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 IGHV3-21A0A0B4J1V1 117 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 PAX4O43316 350 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TSHBP01222 138 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 LGALS3P17931 250 aaKnown RBP4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 ZNF876PQ49A33 203 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TMEM61Q8N0U2 210 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 NPBQ8NG41 125 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TIMM17AQ99595 171 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 CSMD2Q7Z408 3487 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TRAV13-2A0A0B4J235 113 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TIMM17BO60830 172 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 C2orf66Q6UXQ4 117 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 BPESC1Q9GZL8 116 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 LINC00474Q9P2X8 69 aa4.24□□□□□ -1.73
RAB3GAP1-207ENST00000539493 A0A0J9YXY3 114 aa4.23□□□□□ -1.73
RAB3GAP1-207ENST00000539493 NXPH4O95158 308 aa4.23□□□□□ -1.73
RAB3GAP1-207ENST00000539493 GHRHP01286 108 aa4.23□□□□□ -1.73
RAB3GAP1-207ENST00000539493 Q9UF83 564 aa4.23□□□□□ -1.73
RAB3GAP1-207ENST00000539493 FLNCQ14315 2725 aa4.23□□□□□ -1.73
RAB3GAP1-207ENST00000539493 I3L2K1 104 aa4.23□□□□□ -1.73
RAB3GAP1-207ENST00000539493 ZNF80P51504 273 aaPredicted RBP4.23□□□□□ -1.73
RAB3GAP1-207ENST00000539493 SNRPD3P62318 126 aaKnown RBP4.23□□□□□ -1.73
RAB3GAP1-207ENST00000539493 CELSR1Q9NYQ6 3014 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 H3BRN7 92 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 H7C2G1 150 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 LMO4P61968 165 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 SS18Q15532 418 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 MINOS1Q5TGZ0 78 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 MINOS1-NBL1R4GNA1 71 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 TRAV8-3A0A0A6YYJ7 113 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 MIAQ16674 131 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 MRPL55Q7Z7F7 128 aaKnown RBP4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 Q8N6K4 173 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 CELSR2Q9HCU4 2923 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 K7EIM0 57 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 SUMO2P61956 95 aaKnown RBP4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 S100A7L2Q5SY68 101 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
RAB3GAP1-207ENST00000539493 PPP1R17O96001 155 aa4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGHV1-69P01742 117 aa4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 NDPQ00604 133 aa4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ACACBO00763 2458 aa4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 CRYBG3Q68DQ2 2970 aa4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 A0A087WVE0 104 aa4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 M0R3E3 92 aa4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGKV1-17P01599 117 aa4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 ADAMTSL4-AS1Q5T5F5 129 aa4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 UTP20O75691 2785 aaKnown RBP4.21□□□□□ -1.74
RAB3GAP1-207ENST00000539493 PF4P02776 101 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 BAALC-AS2P0C853 105 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 LINC00846Q9NV44 126 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 DOPEY1Q5JWR5 2465 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 USP9XQ93008 2570 aaPredicted RBP4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGLV11-55A0A075B6I3 123 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 IGHV7-4-1A0A0J9YVY3 117 aa4.2□□□□□ -1.74
RAB3GAP1-207ENST00000539493 LYZP61626 148 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms