RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PRSS1P07477 247 aa14.4□□□□□ -0.1
SCARB1-206ENST00000539320 BLOC1S1P78537 153 aa14.4□□□□□ -0.1
SCARB1-206ENST00000539320 COTL1Q14019 142 aa14.4□□□□□ -0.1
SCARB1-206ENST00000539320 A0A1B0GUV1 79 aa14.39□□□□□ -0.11
SCARB1-206ENST00000539320 IGLV4-60A0A075B6I1 120 aa14.38□□□□□ -0.11
SCARB1-206ENST00000539320 IGLV10-54A0A075B6I4 117 aa14.38□□□□□ -0.11
SCARB1-206ENST00000539320 UBE2L6O14933 153 aa14.38□□□□□ -0.11
SCARB1-206ENST00000539320 AMTP48728 403 aa14.38□□□□□ -0.11
SCARB1-206ENST00000539320 RAB14P61106 215 aa14.38□□□□□ -0.11
SCARB1-206ENST00000539320 DGAT2L7PQ6IED9 249 aa14.37□□□□□ -0.11
SCARB1-206ENST00000539320 GATD1Q8NB37 220 aa14.37□□□□□ -0.11
SCARB1-206ENST00000539320 DEFB104AQ8WTQ1 72 aa14.37□□□□□ -0.11
SCARB1-206ENST00000539320 GTSF1Q8WW33 167 aa14.37□□□□□ -0.11
SCARB1-206ENST00000539320 GFRA4Q9GZZ7 299 aa14.37□□□□□ -0.11
SCARB1-206ENST00000539320 TRAV8-4A0A0B4J246 113 aa14.36□□□□□ -0.11
SCARB1-206ENST00000539320 TRAV26-2A0A0B4J265 109 aa14.36□□□□□ -0.11
SCARB1-206ENST00000539320 GATCO43716 136 aaKnown RBP14.36□□□□□ -0.11
SCARB1-206ENST00000539320 SMIM15Q7Z3B0 74 aa14.36□□□□□ -0.11
SCARB1-206ENST00000539320 J3QL48 77 aa14.35□□□□□ -0.11
SCARB1-206ENST00000539320 LYPD6BQ8NI32 183 aa14.35□□□□□ -0.11
SCARB1-206ENST00000539320 FAM231DQ6ZW35 169 aa14.34□□□□□ -0.11
SCARB1-206ENST00000539320 C9orf163Q8N9P6 203 aa14.34□□□□□ -0.11
SCARB1-206ENST00000539320 CLRN3Q8NCR9 226 aa14.34□□□□□ -0.11
SCARB1-206ENST00000539320 CEBPGP53567 150 aa14.33□□□□□ -0.12
SCARB1-206ENST00000539320 CLLU1Q5K131 121 aa14.33□□□□□ -0.12
SCARB1-206ENST00000539320 RPL39LQ96EH5 51 aaKnown RBP14.33□□□□□ -0.12
SCARB1-206ENST00000539320 A8MWL6 223 aa14.32□□□□□ -0.12
SCARB1-206ENST00000539320 KRTAP10-4P60372 401 aaPredicted RBP14.32□□□□□ -0.12
SCARB1-206ENST00000539320 CT83Q5H943 113 aa14.32□□□□□ -0.12
SCARB1-206ENST00000539320 hDV102S1A0JD36 115 aa14.3□□□□□ -0.12
SCARB1-206ENST00000539320 NCR2O95944 276 aa14.3□□□□□ -0.12
SCARB1-206ENST00000539320 FOXA3P55318 350 aaPredicted RBP14.3□□□□□ -0.12
SCARB1-206ENST00000539320 CNBPP62633 177 aaKnown RBP14.3□□□□□ -0.12
SCARB1-206ENST00000539320 KRTAP29-1A8MX34 341 aaPredicted RBP14.29□□□□□ -0.12
SCARB1-206ENST00000539320 APCSP02743 223 aa14.29□□□□□ -0.12
SCARB1-206ENST00000539320 SMIM7Q9BQ49 75 aa14.29□□□□□ -0.12
SCARB1-206ENST00000539320 BORCS7Q96B45 105 aa14.28□□□□□ -0.12
SCARB1-206ENST00000539320 EIF5A2Q9GZV4 153 aaKnown RBP14.28□□□□□ -0.12
SCARB1-206ENST00000539320 AP5S1Q9NUS5 200 aa14.28□□□□□ -0.12
SCARB1-206ENST00000539320 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.28□□□□□ -0.12
SCARB1-206ENST00000539320 SDHAF1A6NFY7 115 aa14.27□□□□□ -0.13
SCARB1-206ENST00000539320 NDUFS6O75380 124 aaKnown RBP14.27□□□□□ -0.13
SCARB1-206ENST00000539320 AMMECR1LQ6DCA0 310 aa14.27□□□□□ -0.13
SCARB1-206ENST00000539320 LRP1Q07954 4544 aaKnown RBP14.27□□□□□ -0.13
SCARB1-206ENST00000539320 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-206ENST00000539320 IGKV3OR2-268A0A0C4DH90 116 aa14.26□□□□□ -0.13
SCARB1-206ENST00000539320 IGKV2-29A2NJV5 120 aaPredicted RBP14.26□□□□□ -0.13
SCARB1-206ENST00000539320 SDIM1Q6ZPB5 146 aa14.26□□□□□ -0.13
SCARB1-206ENST00000539320 LINC01551Q86U37 167 aa14.26□□□□□ -0.13
SCARB1-206ENST00000539320 FAT3Q8TDW7 4589 aa14.26□□□□□ -0.13
SCARB1-206ENST00000539320 RPL37AP61513 92 aaKnown RBP14.25□□□□□ -0.13
SCARB1-206ENST00000539320 RNASEKQ6P5S7 137 aaKnown RBP14.25□□□□□ -0.13
SCARB1-206ENST00000539320 FAM210AQ96ND0 272 aa14.25□□□□□ -0.13
SCARB1-206ENST00000539320 PKHD1L1Q86WI1 4243 aa14.25□□□□□ -0.13
SCARB1-206ENST00000539320 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.24□□□□□ -0.13
SCARB1-206ENST00000539320 GAGE12HA6NDE8 117 aa14.24□□□□□ -0.13
SCARB1-206ENST00000539320 H7C423 109 aa14.24□□□□□ -0.13
SCARB1-206ENST00000539320 PANO1I0J062 215 aa14.24□□□□□ -0.13
SCARB1-206ENST00000539320 TSKUQ8WUA8 353 aa14.24□□□□□ -0.13
SCARB1-206ENST00000539320 TRBV6-5A0A0K0K1A5 114 aa14.23□□□□□ -0.13
SCARB1-206ENST00000539320 A0A1B0GUT8 65 aa14.23□□□□□ -0.13
SCARB1-206ENST00000539320 ZNF727A8MUV8 499 aa14.23□□□□□ -0.13
SCARB1-206ENST00000539320 HIGD1CA8MV81 97 aa14.23□□□□□ -0.13
SCARB1-206ENST00000539320 FGF6P10767 208 aa14.23□□□□□ -0.13
SCARB1-206ENST00000539320 C15orf56Q8N910 161 aa14.23□□□□□ -0.13
SCARB1-206ENST00000539320 IGHV3-64A0A075B6Q5 118 aa14.22□□□□□ -0.13
SCARB1-206ENST00000539320 I3L3M4 83 aa14.22□□□□□ -0.13
SCARB1-206ENST00000539320 PMCHP20382 165 aa14.22□□□□□ -0.13
SCARB1-206ENST00000539320 OSTCQ9NRP0 149 aa14.22□□□□□ -0.13
SCARB1-206ENST00000539320 SLPIP03973 132 aa14.21□□□□□ -0.13
SCARB1-206ENST00000539320 SRP19P09132 144 aaKnown RBP14.21□□□□□ -0.13
SCARB1-206ENST00000539320 SRSF3P84103 164 aaKnown RBP14.21□□□□□ -0.13
SCARB1-206ENST00000539320 CIRBPQ14011 172 aaKnown RBP14.21□□□□□ -0.13
SCARB1-206ENST00000539320 CFAP161Q6P656 301 aa14.21□□□□□ -0.13
SCARB1-206ENST00000539320 COMMD7Q86VX2 200 aa14.21□□□□□ -0.13
SCARB1-206ENST00000539320 CHCHD10Q8WYQ3 142 aaPredicted RBP14.21□□□□□ -0.13
SCARB1-206ENST00000539320 TMEM191AQ9H0A3 160 aa14.21□□□□□ -0.13
SCARB1-206ENST00000539320 FAM231BA6NCW3 169 aa14.2□□□□□ -0.14
SCARB1-206ENST00000539320 ZNF25P17030 456 aaPredicted RBP14.2□□□□□ -0.14
SCARB1-206ENST00000539320 ST20Q9HBF5 79 aa14.2□□□□□ -0.14
SCARB1-206ENST00000539320 LINC00862A6NCI5 91 aa14.19□□□□□ -0.14
SCARB1-206ENST00000539320 GAS8-AS1O95177 125 aa14.19□□□□□ -0.14
SCARB1-206ENST00000539320 TMEM242Q9NWH2 141 aa14.19□□□□□ -0.14
SCARB1-206ENST00000539320 TSHBP01222 138 aa14.18□□□□□ -0.14
SCARB1-206ENST00000539320 RNF185Q96GF1 192 aa14.18□□□□□ -0.14
SCARB1-206ENST00000539320 BTF3L4Q96K17 158 aa14.18□□□□□ -0.14
SCARB1-206ENST00000539320 ESDP10768 282 aa14.17□□□□□ -0.14
SCARB1-206ENST00000539320 HIGD2BQ4VC39 106 aa14.17□□□□□ -0.14
SCARB1-206ENST00000539320 MRAP2Q96G30 205 aa14.17□□□□□ -0.14
SCARB1-206ENST00000539320 TMEM101Q96IK0 257 aa14.17□□□□□ -0.14
SCARB1-206ENST00000539320 V9GYV3 84 aa14.17□□□□□ -0.14
SCARB1-206ENST00000539320 C9JQL5 133 aa14.16□□□□□ -0.14
SCARB1-206ENST00000539320 OXTP01178 125 aa14.16□□□□□ -0.14
SCARB1-206ENST00000539320 CHTF8P0CG12 524 aa14.16□□□□□ -0.14
SCARB1-206ENST00000539320 RPS10P46783 165 aaKnown RBP14.16□□□□□ -0.14
SCARB1-206ENST00000539320 PEA15Q15121 130 aa14.16□□□□□ -0.14
SCARB1-206ENST00000539320 AMN1Q8IY45 258 aa14.16□□□□□ -0.14
SCARB1-206ENST00000539320 OR5A1Q8NGJ0 315 aa14.16□□□□□ -0.14
SCARB1-206ENST00000539320 RAB4AP20338 218 aa14.15□□□□□ -0.14
SCARB1-206ENST00000539320 SPACA4Q8TDM5 124 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms