RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ZNF462Q96JM2 2506 aa13.73□□□□□ -0.21
SFSWAP-207ENST00000538548 PYGO1Q9Y3Y4 419 aa13.73□□□□□ -0.21
SFSWAP-207ENST00000538548 FAM208BQ5VWN6 2430 aa13.73□□□□□ -0.21
SFSWAP-207ENST00000538548 TRAV8-3A0A0A6YYJ7 113 aa13.73□□□□□ -0.21
SFSWAP-207ENST00000538548 TMEM61Q8N0U2 210 aa13.73□□□□□ -0.21
SFSWAP-207ENST00000538548 TMEM101Q96IK0 257 aa13.73□□□□□ -0.21
SFSWAP-207ENST00000538548 ID1P41134 155 aa13.72□□□□□ -0.21
SFSWAP-207ENST00000538548 USMG5Q96IX5 58 aa13.72□□□□□ -0.21
SFSWAP-207ENST00000538548 ZFHX3Q15911 3703 aa13.72□□□□□ -0.21
SFSWAP-207ENST00000538548 LRRK2Q5S007 2527 aa13.72□□□□□ -0.21
SFSWAP-207ENST00000538548 CD28P10747 220 aa13.72□□□□□ -0.21
SFSWAP-207ENST00000538548 ADORA2A-AS1P86434 159 aa13.72□□□□□ -0.21
SFSWAP-207ENST00000538548 IGHV3-11P01762 117 aa13.71□□□□□ -0.22
SFSWAP-207ENST00000538548 Q6ZSV7 163 aa13.71□□□□□ -0.22
SFSWAP-207ENST00000538548 DAZ1Q9NQZ3 744 aaKnown RBP13.71□□□□□ -0.22
SFSWAP-207ENST00000538548 YAE1D1Q9NRH1 226 aa13.71□□□□□ -0.22
SFSWAP-207ENST00000538548 LINC01587Q99440 93 aa13.7□□□□□ -0.22
SFSWAP-207ENST00000538548 BRI3O95415 125 aa13.7□□□□□ -0.22
SFSWAP-207ENST00000538548 FAM104AQ969W3 186 aa13.7□□□□□ -0.22
SFSWAP-207ENST00000538548 IMUPQ9GZP8 106 aa13.7□□□□□ -0.22
SFSWAP-207ENST00000538548 VSIG2Q96IQ7 327 aa13.69□□□□□ -0.22
SFSWAP-207ENST00000538548 TNFRSF18Q9Y5U5 241 aa13.69□□□□□ -0.22
SFSWAP-207ENST00000538548 ACYP1P07311 99 aa13.69□□□□□ -0.22
SFSWAP-207ENST00000538548 H3BUA1 57 aa13.68□□□□□ -0.22
SFSWAP-207ENST00000538548 DCANP1Q8TF63 244 aa13.68□□□□□ -0.22
SFSWAP-207ENST00000538548 NPC2P61916 151 aa13.68□□□□□ -0.22
SFSWAP-207ENST00000538548 POLQO75417 2590 aa13.67□□□□□ -0.22
SFSWAP-207ENST00000538548 TIMM17BO60830 172 aa13.66□□□□□ -0.22
SFSWAP-207ENST00000538548 IGHV1OR15-1A0A075B7D0 117 aa13.66□□□□□ -0.22
SFSWAP-207ENST00000538548 TINCRA0A1B0GVN0 87 aa13.66□□□□□ -0.22
SFSWAP-207ENST00000538548 TRAV12-2A0A075B6T6 113 aa13.65□□□□□ -0.22
SFSWAP-207ENST00000538548 FAM236AA0A1B0GUQ0 79 aa13.65□□□□□ -0.22
SFSWAP-207ENST00000538548 FAM236BA0A1B0GV22 79 aa13.65□□□□□ -0.22
SFSWAP-207ENST00000538548 PRORYQ9H606 182 aa13.65□□□□□ -0.22
SFSWAP-207ENST00000538548 PF4V1P10720 104 aa13.64□□□□□ -0.23
SFSWAP-207ENST00000538548 A8MZ25 164 aa13.63□□□□□ -0.23
SFSWAP-207ENST00000538548 CEMP1Q6PRD7 247 aaPredicted RBP13.63□□□□□ -0.23
SFSWAP-207ENST00000538548 EDA2RQ9HAV5 297 aa13.63□□□□□ -0.23
SFSWAP-207ENST00000538548 K7EMT4 169 aa13.62□□□□□ -0.23
SFSWAP-207ENST00000538548 GNLYP22749 145 aa13.62□□□□□ -0.23
SFSWAP-207ENST00000538548 LMO4P61968 165 aa13.62□□□□□ -0.23
SFSWAP-207ENST00000538548 C3orf56Q8N813 242 aa13.62□□□□□ -0.23
SFSWAP-207ENST00000538548 EDN2P20800 178 aa13.62□□□□□ -0.23
SFSWAP-207ENST00000538548 TMEM95Q3KNT9 176 aa13.62□□□□□ -0.23
SFSWAP-207ENST00000538548 RNASE13Q5GAN3 156 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-207ENST00000538548 VPREB3Q9UKI3 123 aa13.62□□□□□ -0.23
SFSWAP-207ENST00000538548 IGKV3-20P01619 116 aa13.61□□□□□ -0.23
SFSWAP-207ENST00000538548 IGHG2P01859 326 aa13.61□□□□□ -0.23
SFSWAP-207ENST00000538548 LINC00643Q86TS7 51 aa13.6□□□□□ -0.23
SFSWAP-207ENST00000538548 CITED2Q99967 270 aaPredicted RBP13.6□□□□□ -0.23
SFSWAP-207ENST00000538548 IGHV3OR16-10A0A075B7F0 116 aa13.59□□□□□ -0.23
SFSWAP-207ENST00000538548 DAND5Q8N907 189 aa13.59□□□□□ -0.23
SFSWAP-207ENST00000538548 COX7A2LO14548 114 aa13.59□□□□□ -0.23
SFSWAP-207ENST00000538548 SPINK13Q1W4C9 94 aa13.59□□□□□ -0.23
SFSWAP-207ENST00000538548 C3orf22Q8N5N4 141 aa13.59□□□□□ -0.23
SFSWAP-207ENST00000538548 BPESC1Q9GZL8 116 aa13.59□□□□□ -0.23
SFSWAP-207ENST00000538548 A0A1W2PPR1 153 aa13.58□□□□□ -0.24
SFSWAP-207ENST00000538548 NDUFA1O15239 70 aa13.58□□□□□ -0.24
SFSWAP-207ENST00000538548 PRB1P04280 392 aa13.58□□□□□ -0.24
SFSWAP-207ENST00000538548 SMCR5Q8TEV8 140 aa13.58□□□□□ -0.24
SFSWAP-207ENST00000538548 DUX5Q96PT3 197 aa13.58□□□□□ -0.24
SFSWAP-207ENST00000538548 UBE2D4Q9Y2X8 147 aa13.58□□□□□ -0.24
SFSWAP-207ENST00000538548 SNRPD3P62318 126 aaKnown RBP13.58□□□□□ -0.24
SFSWAP-207ENST00000538548 UBTD1Q9HAC8 227 aa13.58□□□□□ -0.24
SFSWAP-207ENST00000538548 CHD6Q8TD26 2715 aa13.57□□□□□ -0.24
SFSWAP-207ENST00000538548 DOPEY1Q5JWR5 2465 aa13.57□□□□□ -0.24
SFSWAP-207ENST00000538548 CIRBPQ14011 172 aaKnown RBP13.57□□□□□ -0.24
SFSWAP-207ENST00000538548 C9orf153Q5TBE3 101 aa13.57□□□□□ -0.24
SFSWAP-207ENST00000538548 PPDPFQ9H3Y8 114 aa13.57□□□□□ -0.24
SFSWAP-207ENST00000538548 UQCRQO14949 82 aa13.57□□□□□ -0.24
SFSWAP-207ENST00000538548 IGLV1-40P01703 118 aa13.57□□□□□ -0.24
SFSWAP-207ENST00000538548 ATP5G1P05496 136 aa13.57□□□□□ -0.24
SFSWAP-207ENST00000538548 ABCA12Q86UK0 2595 aa13.56□□□□□ -0.24
SFSWAP-207ENST00000538548 NDUFA7O95182 113 aa13.56□□□□□ -0.24
SFSWAP-207ENST00000538548 SDIM1Q6ZPB5 146 aa13.56□□□□□ -0.24
SFSWAP-207ENST00000538548 C19orf84I3L1E1 186 aa13.56□□□□□ -0.24
SFSWAP-207ENST00000538548 BRD3OSQ6XYD6 125 aa13.56□□□□□ -0.24
SFSWAP-207ENST00000538548 CHCHD7Q9BUK0 85 aa13.56□□□□□ -0.24
SFSWAP-207ENST00000538548 LY6EQ16553 131 aa13.55□□□□□ -0.24
SFSWAP-207ENST00000538548 LINC00308Q8TCZ7 52 aa13.55□□□□□ -0.24
SFSWAP-207ENST00000538548 IGHV3-73A0A0B4J1V6 119 aa13.55□□□□□ -0.24
SFSWAP-207ENST00000538548 DNAJC30Q96LL9 226 aa13.55□□□□□ -0.24
SFSWAP-207ENST00000538548 CDKN2A-AS1Q9UH64 79 aa13.54□□□□□ -0.24
SFSWAP-207ENST00000538548 PROK1P58294 105 aa13.54□□□□□ -0.24
SFSWAP-207ENST00000538548 LINC00526Q96FQ7 95 aa13.54□□□□□ -0.24
SFSWAP-207ENST00000538548 DOPEY2Q9Y3R5 2298 aa13.53□□□□□ -0.24
SFSWAP-207ENST00000538548 USP9YO00507 2555 aaPredicted RBP13.53□□□□□ -0.24
SFSWAP-207ENST00000538548 IGLV5-45A0A087WSX0 123 aa13.53□□□□□ -0.24
SFSWAP-207ENST00000538548 TRACP01848 142 aa13.53□□□□□ -0.24
SFSWAP-207ENST00000538548 LINC00694P0DN24 101 aa13.53□□□□□ -0.24
SFSWAP-207ENST00000538548 CXCL5P42830 114 aa13.53□□□□□ -0.24
SFSWAP-207ENST00000538548 DAZ2Q13117 558 aaKnown RBP13.53□□□□□ -0.24
SFSWAP-207ENST00000538548 DAZ4Q86SG3 579 aaKnown RBP13.53□□□□□ -0.24
SFSWAP-207ENST00000538548 DAZ3Q9NR90 486 aaKnown RBP13.53□□□□□ -0.24
SFSWAP-207ENST00000538548 K7EQG2 157 aa13.52□□□□□ -0.24
SFSWAP-207ENST00000538548 TIRAPP58753 221 aa13.52□□□□□ -0.24
SFSWAP-207ENST00000538548 BLCAPP62952 87 aa13.52□□□□□ -0.24
SFSWAP-207ENST00000538548 RNF152Q8N8N0 203 aa13.52□□□□□ -0.24
SFSWAP-207ENST00000538548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.52□□□□□ -0.25
SFSWAP-207ENST00000538548 IGKV2-29A2NJV5 120 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms