RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 FMC1Q96HJ9 113 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 LINC01600Q96MT4 127 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 TCEAL7Q9BRU2 100 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 ZNF471Q9BX82 626 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-207ENST00000537965 PKIGQ9Y2B9 76 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 PKHD1L1Q86WI1 4243 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 IGHV1-24A0A0C4DH33 117 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 GRIFINA4D1Z8 144 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 H7C1H1 209 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 SH2D1AO60880 128 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 S100A9P06702 114 aaKnown RBP3.37□□□□□ -1.87
SNHG1-207ENST00000537965 CXCL1P09341 107 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 SMIM17P0DL12 118 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 RBX1P62877 108 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 UBE2V1Q13404 147 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 ZNF674Q2M3X9 581 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 PRR27Q6MZM9 219 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 WDR73Q6P4I2 378 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 Q86TA4 180 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 LINC00269Q8N2A0 174 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 MARVELD1Q9BSK0 173 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 DERL1Q9BUN8 251 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 WFDC1Q9HC57 220 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 PLAC8Q9NZF1 115 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 VAX2Q9UIW0 290 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 DNAH8Q96JB1 4490 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 UBR4Q5T4S7 5183 aa3.37□□□□□ -1.87
SNHG1-207ENST00000537965 BORCS7-ASMTA0A0B4J1R7 106 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 TRBV6-1A0A0K0K1D8 114 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 CTXND1A0A1B0GTU2 59 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 UPK1BO75841 260 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 FHITP49789 147 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 CRIP1P50238 77 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 DEFA1P59665 94 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 DEFA3P59666 94 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 REG3AQ06141 175 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 IQCJQ1A5X6 159 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 SPANXN1Q5VSR9 72 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 SPINK6Q6UWN8 80 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 SPACA4Q8TDM5 124 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 LINC00474Q9P2X8 69 aa3.36□□□□□ -1.87
SNHG1-207ENST00000537965 FAT3Q8TDW7 4589 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 IGLV10-54A0A075B6I4 117 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 TMSB15BA0A087X1C1 80 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 A0A0J9YXV3 536 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 FAM74A7A6NL05 159 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 PANO1I0J062 215 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 PHOX2AO14813 284 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 UBE2L6O14933 153 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 NDUFS6O75380 124 aaKnown RBP3.35□□□□□ -1.87
SNHG1-207ENST00000537965 LTAP01374 205 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 OR5AL1P0C617 328 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 RPS10P46783 165 aaKnown RBP3.35□□□□□ -1.87
SNHG1-207ENST00000537965 UBE2G2P60604 165 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 GAGE6Q13070 117 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 PAPPA-AS1Q5QFB9 102 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 AKR1C8PQ5T2L2 129 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 KRTAP26-1Q6PEX3 210 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 CLPSL2Q6UWE3 100 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 NTM-AS1Q6ZSK4 140 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 INO80EQ8NBZ0 244 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-207ENST00000537965 STOML3Q8TAV4 291 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 GTSF1Q8WW33 167 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 AQP10Q96PS8 301 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
SNHG1-207ENST00000537965 SNAI2O43623 268 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 GAS8-AS1O95177 125 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 AKR1C3P42330 323 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 SULT1A2P50226 295 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 MAJINQ3KP22 176 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 SMIM29Q86T20 159 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 OR10AG1Q8NH19 301 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 AP1S3Q96PC3 154 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 TMEM243Q9BU79 118 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 KIF25-AS1Q9Y6Z4 181 aa3.34□□□□□ -1.87
SNHG1-207ENST00000537965 CHTF8P0CG12 524 aa3.33□□□□□ -1.88
SNHG1-207ENST00000537965 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
SNHG1-207ENST00000537965 PRR3P79522 188 aaKnown RBP3.33□□□□□ -1.88
SNHG1-207ENST00000537965 COX6A2Q02221 97 aa3.33□□□□□ -1.88
SNHG1-207ENST00000537965 Q6ZRP5 223 aa3.33□□□□□ -1.88
SNHG1-207ENST00000537965 Q75L30 129 aa3.33□□□□□ -1.88
SNHG1-207ENST00000537965 BAGE2Q86Y30 109 aa3.33□□□□□ -1.88
SNHG1-207ENST00000537965 STPG4Q8N801 248 aa3.33□□□□□ -1.88
SNHG1-207ENST00000537965 PGLYRP4Q96LB8 373 aa3.33□□□□□ -1.88
SNHG1-207ENST00000537965 XKRY2A2RUG3 117 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 A4D1N5 150 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 MAP1LC3B2A6NCE7 125 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 FAM231BA6NCW3 169 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 M0QY20 66 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 PFDN1O60925 122 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 RAB5CP51148 216 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 RPS20P60866 119 aaKnown RBP3.32□□□□□ -1.88
SNHG1-207ENST00000537965 CACNG7P62955 275 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 COTL1Q14019 142 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 ZNF726P1Q15940 193 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 RASL11AQ6T310 242 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 C20orf203Q8NBC4 194 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 MAP1LC3BQ9GZQ8 125 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 MED28Q9H204 178 aa3.32□□□□□ -1.88
SNHG1-207ENST00000537965 NIT2Q9NQR4 276 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms