RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SUMO4Q6EEV6 95 aa8.29□□□□□ -1.08
CHD4-203ENST00000535717 SMIM15Q7Z3B0 74 aa8.29□□□□□ -1.08
CHD4-203ENST00000535717 ATP6V0E2Q8NHE4 81 aa8.29□□□□□ -1.08
CHD4-203ENST00000535717 UPK3BQ9BT76 320 aa8.29□□□□□ -1.08
CHD4-203ENST00000535717 SCGB1D1O95968 90 aa8.28□□□□□ -1.08
CHD4-203ENST00000535717 TIRAPP58753 221 aa8.28□□□□□ -1.08
CHD4-203ENST00000535717 RIGQ13278 110 aa8.28□□□□□ -1.08
CHD4-203ENST00000535717 COX19Q49B96 90 aa8.28□□□□□ -1.08
CHD4-203ENST00000535717 NEXN-AS1Q8NBZ9 246 aa8.28□□□□□ -1.08
CHD4-203ENST00000535717 CHTOPQ9Y3Y2 248 aaKnown RBP8.28□□□□□ -1.08
CHD4-203ENST00000535717 IGLV2-18A0A075B6J9 118 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 TRBV7-3A0A075B6L6 115 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 C20orf202A1L168 122 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 UBE2D3P61077 147 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 UBE2D2P62837 147 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
CHD4-203ENST00000535717 Q0VG73 95 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
CHD4-203ENST00000535717 VAMP8Q9BV40 100 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 TMEM191AQ9H0A3 160 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 GTSF1LQ9H1H1 148 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 Q9H8V8 135 aa8.27□□□□□ -1.09
CHD4-203ENST00000535717 TRAV26-2A0A0B4J265 109 aa8.26□□□□□ -1.09
CHD4-203ENST00000535717 H7C1H1 209 aa8.26□□□□□ -1.09
CHD4-203ENST00000535717 RASL11AQ6T310 242 aa8.26□□□□□ -1.09
CHD4-203ENST00000535717 GATD1Q8NB37 220 aa8.26□□□□□ -1.09
CHD4-203ENST00000535717 SVIPQ8NHG7 77 aa8.26□□□□□ -1.09
CHD4-203ENST00000535717 UQCR10Q9UDW1 63 aa8.26□□□□□ -1.09
CHD4-203ENST00000535717 A0A1B0GW15 77 aa8.25□□□□□ -1.09
CHD4-203ENST00000535717 A0A1B0GXF2 115 aa8.25□□□□□ -1.09
CHD4-203ENST00000535717 M0R2N4 97 aa8.25□□□□□ -1.09
CHD4-203ENST00000535717 CAMPP49913 170 aa8.25□□□□□ -1.09
CHD4-203ENST00000535717 UBE2V1Q13404 147 aa8.25□□□□□ -1.09
CHD4-203ENST00000535717 MRPL54Q6P161 138 aaKnown RBP8.25□□□□□ -1.09
CHD4-203ENST00000535717 RNF185Q96GF1 192 aa8.25□□□□□ -1.09
CHD4-203ENST00000535717 DNAH2Q9P225 4427 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 HBBP68871 147 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 LELP1Q5T871 98 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 PET117Q6UWS5 81 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 Q6ZR54 194 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 WFDC10BQ8IUB3 73 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 AMN1Q8IY45 258 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 DNAJC30Q96LL9 226 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 TRAPPC1Q9Y5R8 145 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 TNFRSF18Q9Y5U5 241 aa8.24□□□□□ -1.09
CHD4-203ENST00000535717 DNAH10Q8IVF4 4471 aa8.23□□□□□ -1.09
CHD4-203ENST00000535717 IGHV3-38A0A0C4DH36 116 aa8.23□□□□□ -1.09
CHD4-203ENST00000535717 NBDYA0A0U1RRE5 68 aa8.23□□□□□ -1.09
CHD4-203ENST00000535717 SIVA1O15304 175 aa8.23□□□□□ -1.09
CHD4-203ENST00000535717 GAS8-AS1O95177 125 aa8.23□□□□□ -1.09
CHD4-203ENST00000535717 MT-ND6P03923 174 aa8.23□□□□□ -1.09
CHD4-203ENST00000535717 RPL39LQ96EH5 51 aaKnown RBP8.23□□□□□ -1.09
CHD4-203ENST00000535717 TRAV8-6A0A0B4J262 113 aa8.22□□□□□ -1.09
CHD4-203ENST00000535717 OR10J3Q5JRS4 329 aa8.22□□□□□ -1.09
CHD4-203ENST00000535717 FAM104BQ5XKR9 115 aa8.22□□□□□ -1.09
CHD4-203ENST00000535717 ATP5L2Q7Z4Y8 100 aa8.22□□□□□ -1.09
CHD4-203ENST00000535717 DAZ4Q86SG3 579 aaKnown RBP8.22□□□□□ -1.09
CHD4-203ENST00000535717 KRTAP1-5Q9BYS1 174 aa8.22□□□□□ -1.09
CHD4-203ENST00000535717 DAZ3Q9NR90 486 aaKnown RBP8.22□□□□□ -1.09
CHD4-203ENST00000535717 COX11Q9Y6N1 276 aa8.22□□□□□ -1.09
CHD4-203ENST00000535717 FRAS1Q86XX4 4008 aa8.21□□□□□ -1.1
CHD4-203ENST00000535717 DNAH10OSP0CZ25 163 aa8.21□□□□□ -1.1
CHD4-203ENST00000535717 LINC00310P59036 64 aa8.21□□□□□ -1.1
CHD4-203ENST00000535717 Q8N976 141 aa8.21□□□□□ -1.1
CHD4-203ENST00000535717 MRAP2Q96G30 205 aa8.21□□□□□ -1.1
CHD4-203ENST00000535717 LAMTOR2Q9Y2Q5 125 aa8.21□□□□□ -1.1
CHD4-203ENST00000535717 TRBV6-8A0A0A6YYG3 113 aa8.2□□□□□ -1.1
CHD4-203ENST00000535717 HSBP1L1C9JCN9 74 aa8.2□□□□□ -1.1
CHD4-203ENST00000535717 SMKR1H3BMG3 65 aa8.2□□□□□ -1.1
CHD4-203ENST00000535717 NCR2O95944 276 aa8.2□□□□□ -1.1
CHD4-203ENST00000535717 IGLC3P0DOY3 106 aa8.2□□□□□ -1.1
CHD4-203ENST00000535717 PTTG1IPP53801 180 aa8.2□□□□□ -1.1
CHD4-203ENST00000535717 PMCHL1Q16048 86 aa8.2□□□□□ -1.1
CHD4-203ENST00000535717 MRPL51Q4U2R6 128 aaKnown RBP8.2□□□□□ -1.1
CHD4-203ENST00000535717 NTM-AS1Q6ZSK4 140 aa8.2□□□□□ -1.1
CHD4-203ENST00000535717 ALKBH7Q9BT30 221 aaPredicted RBP8.2□□□□□ -1.1
CHD4-203ENST00000535717 TRBV6-5A0A0K0K1A5 114 aa8.19□□□□□ -1.1
CHD4-203ENST00000535717 CCL25O15444 150 aa8.19□□□□□ -1.1
CHD4-203ENST00000535717 HNRNPA3P51991 378 aaKnown RBP8.19□□□□□ -1.1
CHD4-203ENST00000535717 TTC32Q5I0X7 151 aa8.19□□□□□ -1.1
CHD4-203ENST00000535717 DNAH17Q9UFH2 4485 aa8.18□□□□□ -1.1
CHD4-203ENST00000535717 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
CHD4-203ENST00000535717 TMEM97Q5BJF2 176 aa8.18□□□□□ -1.1
CHD4-203ENST00000535717 LINC01556Q5JQF7 62 aa8.18□□□□□ -1.1
CHD4-203ENST00000535717 Q8N3U1 123 aa8.18□□□□□ -1.1
CHD4-203ENST00000535717 NRACQ8N912 160 aa8.18□□□□□ -1.1
CHD4-203ENST00000535717 DEFB104AQ8WTQ1 72 aa8.18□□□□□ -1.1
CHD4-203ENST00000535717 GNB1LQ9BYB4 327 aa8.18□□□□□ -1.1
CHD4-203ENST00000535717 SDHAF1A6NFY7 115 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 IGHV3-30P01768 117 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 IGHV3-33P01772 117 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 IGHV3-30-3P0DP02 117 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 IGHV3-30-5P0DP03 117 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 CKS2P33552 79 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 SPATA45Q537H7 98 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 NIT1Q86X76 327 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 ST20Q9HBF5 79 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 PAM16Q9Y3D7 125 aa8.17□□□□□ -1.1
CHD4-203ENST00000535717 TRAV9-2A0A087WT02 112 aa8.16□□□□□ -1.1
CHD4-203ENST00000535717 IGHV1-24A0A0C4DH33 117 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms