RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 FAM231CP0DMU5 169 aa11.35□□□□□ -0.59
GOPC-203ENST00000535237 TRBV7-3A0A075B6L6 115 aa11.34□□□□□ -0.59
GOPC-203ENST00000535237 hADV29S1A0JD25 119 aa11.34□□□□□ -0.59
GOPC-203ENST00000535237 IGHG2P01859 326 aa11.34□□□□□ -0.59
GOPC-203ENST00000535237 NKAPP1Q8N9T2 125 aa11.34□□□□□ -0.59
GOPC-203ENST00000535237 CCDC179H3BU77 68 aa11.34□□□□□ -0.59
GOPC-203ENST00000535237 COX7A2LO14548 114 aa11.34□□□□□ -0.59
GOPC-203ENST00000535237 SLURP1P55000 103 aa11.34□□□□□ -0.59
GOPC-203ENST00000535237 Q6ZQT7 251 aa11.33□□□□□ -0.6
GOPC-203ENST00000535237 HHLA3Q9XRX5 114 aa11.33□□□□□ -0.6
GOPC-203ENST00000535237 ABCA12Q86UK0 2595 aa11.33□□□□□ -0.6
GOPC-203ENST00000535237 IGLV10-54A0A075B6I4 117 aa11.33□□□□□ -0.6
GOPC-203ENST00000535237 SDIM1Q6ZPB5 146 aa11.33□□□□□ -0.6
GOPC-203ENST00000535237 IGHV4-61A0A0C4DH41 118 aa11.33□□□□□ -0.6
GOPC-203ENST00000535237 JMJD7-PLA2G4BH0Y9G9 81 aa11.33□□□□□ -0.6
GOPC-203ENST00000535237 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
GOPC-203ENST00000535237 TRAV23DV6A0A075B6W5 121 aa11.32□□□□□ -0.6
GOPC-203ENST00000535237 NRACQ8N912 160 aa11.32□□□□□ -0.6
GOPC-203ENST00000535237 SMAD5-AS1Q9Y6J3 95 aa11.32□□□□□ -0.6
GOPC-203ENST00000535237 USP9YO00507 2555 aaPredicted RBP11.32□□□□□ -0.6
GOPC-203ENST00000535237 A0A0J9YX75 114 aa11.32□□□□□ -0.6
GOPC-203ENST00000535237 LTBP2Q14767 1821 aa11.32□□□□□ -0.6
GOPC-203ENST00000535237 K7EQD1 137 aa11.31□□□□□ -0.6
GOPC-203ENST00000535237 USP9XQ93008 2570 aaPredicted RBP11.31□□□□□ -0.6
GOPC-203ENST00000535237 K7EMT4 169 aa11.31□□□□□ -0.6
GOPC-203ENST00000535237 IGHV3-30P01768 117 aa11.31□□□□□ -0.6
GOPC-203ENST00000535237 IGHV3-30-5P0DP03 117 aa11.31□□□□□ -0.6
GOPC-203ENST00000535237 C20orf197Q8N268 126 aa11.31□□□□□ -0.6
GOPC-203ENST00000535237 TRBV30A0A0K0K1B3 111 aa11.31□□□□□ -0.6
GOPC-203ENST00000535237 Q6ZS46 218 aa11.31□□□□□ -0.6
GOPC-203ENST00000535237 TMEM223A0PJW6 202 aa11.31□□□□□ -0.6
GOPC-203ENST00000535237 HIST2H2BDQ6DRA6 164 aa11.31□□□□□ -0.6
GOPC-203ENST00000535237 IGLV4-3A0A075B6K6 122 aa11.3□□□□□ -0.6
GOPC-203ENST00000535237 C11orf21Q9P2W6 132 aa11.3□□□□□ -0.6
GOPC-203ENST00000535237 PRORYQ9H606 182 aa11.3□□□□□ -0.6
GOPC-203ENST00000535237 ZFAND2AQ8N6M9 145 aa11.29□□□□□ -0.6
GOPC-203ENST00000535237 DEFB105AQ8NG35 78 aa11.29□□□□□ -0.6
GOPC-203ENST00000535237 PRB2P02812 416 aaPredicted RBP11.29□□□□□ -0.6
GOPC-203ENST00000535237 C3orf22Q8N5N4 141 aa11.29□□□□□ -0.6
GOPC-203ENST00000535237 GPHB5Q86YW7 130 aa11.29□□□□□ -0.6
GOPC-203ENST00000535237 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
GOPC-203ENST00000535237 NUP210LQ5VU65 1888 aa11.28□□□□□ -0.6
GOPC-203ENST00000535237 AGRNO00468 2067 aa11.28□□□□□ -0.6
GOPC-203ENST00000535237 IGHV4OR15-8A0A075B7B6 117 aa11.28□□□□□ -0.6
GOPC-203ENST00000535237 A0A087WW49 117 aa11.28□□□□□ -0.6
GOPC-203ENST00000535237 RNF152Q8N8N0 203 aa11.28□□□□□ -0.6
GOPC-203ENST00000535237 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
GOPC-203ENST00000535237 ATG2AQ2TAZ0 1938 aa11.27□□□□□ -0.61
GOPC-203ENST00000535237 ZFAND3Q9H8U3 227 aa11.27□□□□□ -0.61
GOPC-203ENST00000535237 EML5Q05BV3 1969 aa11.27□□□□□ -0.61
GOPC-203ENST00000535237 SIRPDQ9H106 197 aa11.27□□□□□ -0.61
GOPC-203ENST00000535237 IGHV4-28A0A0C4DH34 117 aa11.26□□□□□ -0.61
GOPC-203ENST00000535237 A8MZ25 164 aa11.26□□□□□ -0.61
GOPC-203ENST00000535237 GYPEP15421 78 aa11.26□□□□□ -0.61
GOPC-203ENST00000535237 CDK2AP2O75956 126 aa11.26□□□□□ -0.61
GOPC-203ENST00000535237 LINC00308Q8TCZ7 52 aa11.26□□□□□ -0.61
GOPC-203ENST00000535237 A0A0C4DFX4 3053 aa11.25□□□□□ -0.61
GOPC-203ENST00000535237 A0A096LNJ9 63 aa11.25□□□□□ -0.61
GOPC-203ENST00000535237 MTORP42345 2549 aa11.25□□□□□ -0.61
GOPC-203ENST00000535237 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
GOPC-203ENST00000535237 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
GOPC-203ENST00000535237 M0QY20 66 aa11.24□□□□□ -0.61
GOPC-203ENST00000535237 NREPQ16612 68 aa11.24□□□□□ -0.61
GOPC-203ENST00000535237 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
GOPC-203ENST00000535237 TRBV27A0A0K0K1C4 114 aa11.24□□□□□ -0.61
GOPC-203ENST00000535237 ODF3BA8MYP8 253 aa11.24□□□□□ -0.61
GOPC-203ENST00000535237 NDUFA7O95182 113 aa11.24□□□□□ -0.61
GOPC-203ENST00000535237 ZNF843Q8N446 348 aa11.24□□□□□ -0.61
GOPC-203ENST00000535237 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
GOPC-203ENST00000535237 J3QLI3 93 aa11.23□□□□□ -0.61
GOPC-203ENST00000535237 BRK1Q8WUW1 75 aa11.23□□□□□ -0.61
GOPC-203ENST00000535237 NCR3O14931 201 aa11.23□□□□□ -0.61
GOPC-203ENST00000535237 NDUFC2O95298 119 aa11.23□□□□□ -0.61
GOPC-203ENST00000535237 C5orf47Q569G3 176 aa11.23□□□□□ -0.61
GOPC-203ENST00000535237 ESM1Q9NQ30 184 aa11.23□□□□□ -0.61
GOPC-203ENST00000535237 CCL24O00175 119 aa11.22□□□□□ -0.61
GOPC-203ENST00000535237 SLPIP03973 132 aa11.22□□□□□ -0.61
GOPC-203ENST00000535237 CNFNQ9BYD5 112 aa11.22□□□□□ -0.61
GOPC-203ENST00000535237 FUSP35637 526 aaKnown RBP eCLIP11.22□□□□□ -0.61
GOPC-203ENST00000535237 PRR9Q5T870 116 aa11.22□□□□□ -0.61
GOPC-203ENST00000535237 FN1P02751 2386 aaKnown RBP11.21□□□□□ -0.61
GOPC-203ENST00000535237 PKD1L2Q7Z442 2459 aa11.21□□□□□ -0.61
GOPC-203ENST00000535237 LST1O00453 97 aa11.21□□□□□ -0.61
GOPC-203ENST00000535237 ZMAT4Q9H898 229 aa11.21□□□□□ -0.61
GOPC-203ENST00000535237 RNASE3P12724 160 aaKnown RBP11.21□□□□□ -0.62
GOPC-203ENST00000535237 UPK3BQ9BT76 320 aa11.21□□□□□ -0.62
GOPC-203ENST00000535237 HTTP42858 3142 aa11.2□□□□□ -0.62
GOPC-203ENST00000535237 LY6LH3BQJ8 138 aa11.2□□□□□ -0.62
GOPC-203ENST00000535237 NRGNQ92686 78 aa11.2□□□□□ -0.62
GOPC-203ENST00000535237 BRCA2P51587 3418 aa11.2□□□□□ -0.62
GOPC-203ENST00000535237 PRRC2AP48634 2157 aaKnown RBP11.2□□□□□ -0.62
GOPC-203ENST00000535237 PSCAO43653 123 aa11.2□□□□□ -0.62
GOPC-203ENST00000535237 UBE2D1P51668 147 aa11.2□□□□□ -0.62
GOPC-203ENST00000535237 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
GOPC-203ENST00000535237 IMUPQ9GZP8 106 aa11.2□□□□□ -0.62
GOPC-203ENST00000535237 DEFB113Q30KQ7 82 aa11.2□□□□□ -0.62
GOPC-203ENST00000535237 C16orf74Q96GX8 76 aa11.2□□□□□ -0.62
GOPC-203ENST00000535237 DEFB121Q5J5C9 76 aa11.19□□□□□ -0.62
GOPC-203ENST00000535237 TRBV10-1A0A0K0K1A3 114 aa11.19□□□□□ -0.62
GOPC-203ENST00000535237 CRIP2P52943 208 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms