RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 MRAP2Q96G30 205 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 LRP1BQ9NZR2 4599 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 A0A1B0GW15 77 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 REG3AQ06141 175 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 WFDC2Q14508 124 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 C9orf163Q8N9P6 203 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 DEFB104AQ8WTQ1 72 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 CHAC1Q9BUX1 264 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 HSPG2P98160 4391 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 AMTP48728 403 aa6.78□□□□□ -1.32
CSDE1-217ENST00000534699 Q8N3U1 123 aa6.78□□□□□ -1.32
CSDE1-217ENST00000534699 TSKUQ8WUA8 353 aa6.78□□□□□ -1.32
CSDE1-217ENST00000534699 TPPP3Q9BW30 176 aa6.78□□□□□ -1.32
CSDE1-217ENST00000534699 TMEM191AQ9H0A3 160 aa6.78□□□□□ -1.32
CSDE1-217ENST00000534699 AP5S1Q9NUS5 200 aa6.78□□□□□ -1.32
CSDE1-217ENST00000534699 USP17L23D6RBM5 183 aa6.77□□□□□ -1.33
CSDE1-217ENST00000534699 K7EN84 100 aa6.77□□□□□ -1.33
CSDE1-217ENST00000534699 GAGE6Q13070 117 aa6.77□□□□□ -1.33
CSDE1-217ENST00000534699 C20orf203Q8NBC4 194 aa6.77□□□□□ -1.33
CSDE1-217ENST00000534699 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-217ENST00000534699 RAB14P61106 215 aa6.77□□□□□ -1.33
CSDE1-217ENST00000534699 RIGQ13278 110 aa6.77□□□□□ -1.33
CSDE1-217ENST00000534699 A0A1B0GUT8 65 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 KRTAP29-1A8MX34 341 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-217ENST00000534699 I3L3M4 83 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 PPP1R2P9O14990 202 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 LINC00269Q8N2A0 174 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 GATD1Q8NB37 220 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
CSDE1-217ENST00000534699 OXTP01178 125 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 APCSP02743 223 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 RPL32P62910 135 aaKnown RBP6.76□□□□□ -1.33
CSDE1-217ENST00000534699 COMMD7Q86VX2 200 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 LINC00528Q8N1L1 170 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 SMIM7Q9BQ49 75 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 FAM30AQ9NZY2 134 aa6.76□□□□□ -1.33
CSDE1-217ENST00000534699 S100A8P05109 93 aa6.75□□□□□ -1.33
CSDE1-217ENST00000534699 SRP19P09132 144 aaKnown RBP6.75□□□□□ -1.33
CSDE1-217ENST00000534699 CIRBPQ14011 172 aaKnown RBP6.75□□□□□ -1.33
CSDE1-217ENST00000534699 ALKAL2Q6UX46 152 aa6.75□□□□□ -1.33
CSDE1-217ENST00000534699 MRPL52Q86TS9 123 aaKnown RBP6.75□□□□□ -1.33
CSDE1-217ENST00000534699 LINC01551Q86U37 167 aa6.75□□□□□ -1.33
CSDE1-217ENST00000534699 GTSF1Q8WW33 167 aa6.75□□□□□ -1.33
CSDE1-217ENST00000534699 RNASE7Q9H1E1 156 aaKnown RBP6.75□□□□□ -1.33
CSDE1-217ENST00000534699 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-217ENST00000534699 MUC21A0A0G2JKD1 596 aa6.74□□□□□ -1.33
CSDE1-217ENST00000534699 MUC21A0A140T8X8 626 aa6.74□□□□□ -1.33
CSDE1-217ENST00000534699 ZNF727A8MUV8 499 aa6.74□□□□□ -1.33
CSDE1-217ENST00000534699 PRSS1P07477 247 aa6.74□□□□□ -1.33
CSDE1-217ENST00000534699 PEA15Q15121 130 aa6.74□□□□□ -1.33
CSDE1-217ENST00000534699 EIF5A2Q9GZV4 153 aaKnown RBP6.74□□□□□ -1.33
CSDE1-217ENST00000534699 CSDC2Q9Y534 153 aaKnown RBP6.74□□□□□ -1.33
CSDE1-217ENST00000534699 IGHV3-64A0A075B6Q5 118 aa6.74□□□□□ -1.33
CSDE1-217ENST00000534699 OR5A1Q8NGJ0 315 aa6.74□□□□□ -1.33
CSDE1-217ENST00000534699 TMEM101Q96IK0 257 aa6.74□□□□□ -1.33
CSDE1-217ENST00000534699 ST20Q9HBF5 79 aa6.74□□□□□ -1.33
CSDE1-217ENST00000534699 TMEM241Q24JQ0 296 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 AMMECR1LQ6DCA0 310 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 SCXQ7RTU7 201 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 BTF3L4Q96K17 158 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 DNAH5Q8TE73 4624 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 F8WDY8 70 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 HLA-DQA1P01909 254 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 ESDP10768 282 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 PMCHP20382 165 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 TIMM21Q9BVV7 248 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 NAT8Q9UHE5 227 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 NAT8BQ9UHF3 227 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 IGLV10-54A0A075B6I4 117 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 SDHAF1A6NFY7 115 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 LECT2O14960 151 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 FUSP35637 526 aaKnown RBP eCLIP6.73□□□□□ -1.332e-9■□□□□ 9
CSDE1-217ENST00000534699 TMEM18Q96B42 140 aa6.73□□□□□ -1.33
CSDE1-217ENST00000534699 VCYO14598 125 aa6.72□□□□□ -1.33
CSDE1-217ENST00000534699 PHOX2AO14813 284 aa6.72□□□□□ -1.33
CSDE1-217ENST00000534699 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
CSDE1-217ENST00000534699 ISOC2Q96AB3 205 aa6.72□□□□□ -1.33
CSDE1-217ENST00000534699 VPS13BQ7Z7G8 4022 aa6.72□□□□□ -1.33
CSDE1-217ENST00000534699 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-217ENST00000534699 SDIM1Q6ZPB5 146 aa6.71□□□□□ -1.34
CSDE1-217ENST00000534699 CIRBP-AS1Q8TBR5 109 aa6.71□□□□□ -1.34
CSDE1-217ENST00000534699 C20orf78Q9BR46 151 aa6.71□□□□□ -1.34
CSDE1-217ENST00000534699 LINC00474Q9P2X8 69 aa6.71□□□□□ -1.34
CSDE1-217ENST00000534699 IGLV4-60A0A075B6I1 120 aa6.71□□□□□ -1.34
CSDE1-217ENST00000534699 GVQW2A0A096LPI5 108 aaPredicted RBP6.71□□□□□ -1.34
CSDE1-217ENST00000534699 HIGD1CA8MV81 97 aa6.71□□□□□ -1.34
CSDE1-217ENST00000534699 RAB4AP20338 218 aa6.71□□□□□ -1.34
CSDE1-217ENST00000534699 V9GYV3 84 aa6.71□□□□□ -1.34
CSDE1-217ENST00000534699 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
CSDE1-217ENST00000534699 FGF6P10767 208 aa6.7□□□□□ -1.34
CSDE1-217ENST00000534699 SMIM27A0A1W2PRY6 76 aa6.7□□□□□ -1.34
CSDE1-217ENST00000534699 SS18Q15532 418 aa6.7□□□□□ -1.34
CSDE1-217ENST00000534699 DNAH8Q96JB1 4490 aa6.69□□□□□ -1.34
CSDE1-217ENST00000534699 F8W036 122 aa6.69□□□□□ -1.34
CSDE1-217ENST00000534699 PPBPP02775 128 aa6.69□□□□□ -1.34
CSDE1-217ENST00000534699 SSTP61278 116 aa6.69□□□□□ -1.34
CSDE1-217ENST00000534699 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
CSDE1-217ENST00000534699 TRBV24-1A0A075B6N3 115 aa6.68□□□□□ -1.34
CSDE1-217ENST00000534699 C7orf77A4D0Y5 90 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms