RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 DAZ1Q9NQZ3 744 aaKnown RBP2.28□□□□□ -2.04
CSDE1-216ENST00000534389 DAZ3Q9NR90 486 aaKnown RBP2.28□□□□□ -2.04
CSDE1-216ENST00000534389 LINC00846Q9NV44 126 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 TP53TG1Q9Y2A0 90 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 KIF25-AS1Q9Y6Z4 181 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 ZGRF1Q86YA3 2104 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV1-69DA0A0B4J2H0 117 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 A0A0J9YWU9 116 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 C5orf67F2Z3F1 127 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 M0R381 172 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 NBR2O15453 112 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 LYZL6O75951 148 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 NXPH4O95158 308 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 NDUFC2O95298 119 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 TRBV12-3P01733 135 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 IGHG2P01859 326 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 CCL4P13236 92 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 XCL1P47992 114 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 DLX1P56177 255 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 NPC2P61916 151 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 PLGLAQ15195 96 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 MIAQ16674 131 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 KRTAP24-1Q3LI83 254 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 VMA21Q3ZAQ7 101 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 FAM222AQ5U5X8 452 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 SOSTDC1Q6X4U4 206 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 PRSS33Q8NF86 280 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 OBSCN-AS1Q96MR7 158 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 TIMM17AQ99595 171 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 SIRPDQ9H106 197 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 SPRR3Q9UBC9 169 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 XCL2Q9UBD3 114 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 SLC25A15Q9Y619 301 aa2.27□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV3OR16-8A0A075B7F1 116 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 A0A087WZ39 114 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 SMIM26A0A096LP01 95 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 TRAV12-3A0A0B4J271 114 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV1-18A0A0C4DH31 117 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 A0A0U1RRA0 63 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 BUB1B-PAK6H3BSN5 160 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 COX7A2LO14548 114 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 IGKV3-15P01624 115 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV3-23P01764 117 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 MGPP08493 103 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV3-30-3P0DP02 117 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 NDPQ00604 133 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 SS18Q15532 418 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 FAM229BQ4G0N7 80 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 SPANXN1Q5VSR9 72 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 ZFAND2AQ8N6M9 145 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 WFDC9Q8NEX5 89 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 SPATA3Q8NHX4 192 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 TMEM243Q9BU79 118 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 TTTY12Q9BZ98 90 aa2.26□□□□□ -2.05
CSDE1-216ENST00000534389 IGLV4-3A0A075B6K6 122 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 EPOPA6NHQ4 379 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 GNRH2O43555 120 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 TIMM17BO60830 172 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 COX6CP09669 75 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 RNASE3P12724 160 aaKnown RBP2.25□□□□□ -2.05
CSDE1-216ENST00000534389 DEFB1P60022 68 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 KRTAP10-9P60411 292 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 ECSCRQ19T08 205 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 C14orf177Q52M58 125 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 LYPD2Q6UXB3 125 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 VMO1Q7Z5L0 202 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 C20orf197Q8N268 126 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 BPESC1Q9GZL8 116 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 DEFB127Q9H1M4 99 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 Q9HAA7 133 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 C14orf132Q9NPU4 83 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 NDUFA12Q9UI09 145 aa2.25□□□□□ -2.05
CSDE1-216ENST00000534389 PRRC2AP48634 2157 aaKnown RBP2.25□□□□□ -2.05
CSDE1-216ENST00000534389 IGLV11-55A0A075B6I3 123 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 TRAV10A0A0B4J240 114 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV3-35A0A0C4DH35 117 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV3-66A0A0C4DH42 116 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 TRBV7-6A0A0J9YX20 115 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 TRBV6-5A0A0K0K1A5 114 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 TRBV27A0A0K0K1C4 114 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 CCL21O00585 134 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 SOCS3O14543 225 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV1-69P01742 117 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 IGHV1-46P01743 117 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 CCKP06307 115 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 CTSGP08311 255 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 CCL5P13501 91 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 RNASE4P34096 147 aaKnown RBP2.24□□□□□ -2.05
CSDE1-216ENST00000534389 NOTCH2NLQ7Z3S9 236 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 LINC00308Q8TCZ7 52 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 BRK1Q8WUW1 75 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 ITLN2Q8WWU7 325 aaPredicted RBP2.24□□□□□ -2.05
CSDE1-216ENST00000534389 RMI2Q96E14 147 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 ZNF625Q96I27 306 aaPredicted RBP2.24□□□□□ -2.05
CSDE1-216ENST00000534389 VSIG2Q96IQ7 327 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 DYNLRB1Q9NP97 96 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 PLCE1Q9P212 2302 aa2.24□□□□□ -2.05
CSDE1-216ENST00000534389 IGLV3-9A0A075B6K5 115 aa2.23□□□□□ -2.05
CSDE1-216ENST00000534389 TRAV7A0A075B6U4 112 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms