RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 P0C879 139 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 IGHV3-30-5P0DP03 117 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 ZNF22P17026 224 aaPredicted RBP3.04□□□□□ -1.92
ITGB1-219ENST00000534049 ZNF138P52744 262 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 Q6ZVQ6 151 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 TMEM263Q8WUH6 116 aaKnown RBP3.04□□□□□ -1.92
ITGB1-219ENST00000534049 TIMM21Q9BVV7 248 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 Q9H3A6 140 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 C11orf68Q9H3H3 251 aaKnown RBP3.04□□□□□ -1.92
ITGB1-219ENST00000534049 MRPL35Q9NZE8 188 aaKnown RBP3.04□□□□□ -1.92
ITGB1-219ENST00000534049 DOCK9Q9BZ29 2069 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 AKAP9Q99996 3911 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 RP1P56715 2156 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 TRGV8A0A0C4DH27 118 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 A0A0J9YY99 117 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 TMEM223A0PJW6 202 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 C8orf87E5RJ46 101 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 J3QT63 122 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 M0R378 163 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 IGKV1-39P01597 117 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 IGKV1D-16P01601 117 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 IGKV1D-39P04432 117 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 SPINT3P49223 89 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 CXCL6P80162 114 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 RHOHQ15669 191 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 Q1RN00 199 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 Q1T7F1 81 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 FHL5Q5TD97 284 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 LCA10Q71F78 164 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 C17orf82Q86X59 251 aaPredicted RBP3.03□□□□□ -1.92
ITGB1-219ENST00000534049 Q8N2B8 174 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 CCL4L1Q8NHW4 92 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 PATE1Q8WXA2 126 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 TOMM6Q96B49 74 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 SMIM14Q96QK8 99 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 DEPPQ9NTK1 212 aa3.03□□□□□ -1.92
ITGB1-219ENST00000534049 USP9YO00507 2555 aaPredicted RBP3.03□□□□□ -1.93
ITGB1-219ENST00000534049 NBASA2RRP1 2371 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 LRRK1Q38SD2 2015 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 TRPM6Q9BX84 2022 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 IGLV3-32A0A0A0MS00 114 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 A0A0J9YX75 114 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 SDHAF1A6NFY7 115 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 D6R8Y8 96 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 ERC2-IT1O76042 136 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 COX6B1P14854 86 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 RPS27P42677 84 aaKnown RBP3.02□□□□□ -1.93
ITGB1-219ENST00000534049 ZNF137PP52743 207 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 ESRGQ1W209 222 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 MRPL51Q4U2R6 128 aaKnown RBP3.02□□□□□ -1.93
ITGB1-219ENST00000534049 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.02□□□□□ -1.93
ITGB1-219ENST00000534049 DYNAPQ8N1N2 210 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 TTTY13Q9BZ97 58 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 CYSTM1Q9H1C7 97 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 UBE2D4Q9Y2X8 147 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 CSMD2Q7Z408 3487 aa3.02□□□□□ -1.93
ITGB1-219ENST00000534049 DOPEY1Q5JWR5 2465 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 SDK2Q58EX2 2172 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 MED12LQ86YW9 2145 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 DNHD1Q96M86 4753 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 IGLV4-3A0A075B6K6 122 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 IGKV1D-13A0A0B4J2D9 117 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 IGHV5-10-1A0A0J9YXX1 117 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 LOC389332A0A1B0GUA5 103 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 TMEM30CPA0ZSE6 113 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 J3QKU1 62 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 ZNF73O43830 326 aaPredicted RBP3.01□□□□□ -1.93
ITGB1-219ENST00000534049 SH2D1AO60880 128 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 PPP1R17O96001 155 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 KRTAP1-4P0C5Y4 121 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 IGKV1-13P0DP09 117 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 CCL4P13236 92 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 BLCAPP62952 87 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 LAGE3Q14657 143 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 ATP11AUNQ6ZP68 121 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 MIR17HGQ75NE6 70 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 VN1R4Q7Z5H5 301 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 VMO1Q7Z5L0 202 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 C20orf197Q8N268 126 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 C6orf223Q8N319 242 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 FAM216BQ8N7L0 139 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 SMCR5Q8TEV8 140 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 RNASE6Q93091 150 aaKnown RBP3.01□□□□□ -1.93
ITGB1-219ENST00000534049 COX14Q96I36 57 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 SPACA5Q96QH8 159 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 SCGB3A1Q96QR1 104 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 ESM1Q9NQ30 184 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 LINC00588Q9Y4M8 146 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 ICOSQ9Y6W8 199 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 TEX15Q9BXT5 2789 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 NOTCH2Q04721 2471 aa3.01□□□□□ -1.93
ITGB1-219ENST00000534049 MYO9AB2RTY4 2548 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 ABCA12Q86UK0 2595 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 IGHV1OR21-1A0A087WYE8 117 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 FAM223BA6NKX1 122 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 DNAL4O96015 105 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 SS18Q15532 418 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 LYPD5Q6UWN5 251 aa3□□□□□ -1.93
ITGB1-219ENST00000534049 C16orf47Q6ZP98 133 aaPredicted RBP3□□□□□ -1.93
ITGB1-219ENST00000534049 COX8CQ7Z4L0 72 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms