RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 COL4A2P08572 1712 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 TICRRQ7Z2Z1 1910 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 SCN8AQ9UQD0 1980 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 Q6ZS46 218 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 TRPM7Q96QT4 1865 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 IGHV4-59P01825 116 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 KRTAP3-3Q9BYR6 98 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 KRTAP3-2Q9BYR7 98 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 KLK5Q9Y337 293 aaPredicted RBP2.97□□□□□ -1.93
SOX6-217ENST00000533870 PCNX1Q96RV3 2341 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 DENND4AQ7Z401 1863 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 CCKP06307 115 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 NHLRC4P0CG21 123 aaPredicted RBP2.97□□□□□ -1.93
SOX6-217ENST00000533870 UNQ9165/PRO28630Q6UXU0 137 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 NTM-AS1Q6ZSK4 140 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 NBASA2RRP1 2371 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 CCL18P55774 89 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 PRR9Q5T870 116 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 COX7BP24311 80 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 CD164L2Q6UWJ8 174 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 CADP27708 2225 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 ABCA4P78363 2273 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 TSPEAR-AS2P59090 65 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 CXCL6P80162 114 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 Q6ZQT7 251 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 CDC42SE2Q9NRR3 84 aa2.97□□□□□ -1.93
SOX6-217ENST00000533870 MED12Q93074 2177 aa2.96□□□□□ -1.93
SOX6-217ENST00000533870 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.96□□□□□ -1.93
SOX6-217ENST00000533870 TRBV7-6A0A0J9YX20 115 aa2.96□□□□□ -1.93
SOX6-217ENST00000533870 IGKV2-29A2NJV5 120 aaPredicted RBP2.96□□□□□ -1.93
SOX6-217ENST00000533870 TRBV12-3P01733 135 aa2.96□□□□□ -1.93
SOX6-217ENST00000533870 UPK3BQ9BT76 320 aa2.96□□□□□ -1.93
SOX6-217ENST00000533870 TRIP12Q14669 1992 aaPredicted RBP2.96□□□□□ -1.93
SOX6-217ENST00000533870 ESPL1Q14674 2120 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 IGHV3OR16-12A0A075B7B8 117 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 A0A1B0GUV1 79 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 GRNP28799 593 aaKnown RBP2.96□□□□□ -1.94
SOX6-217ENST00000533870 BRD3OSQ6XYD6 125 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 C1orf43Q9BWL3 253 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 C14orf132Q9NPU4 83 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 XCL1P47992 114 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 CFHR3Q02985 330 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 XCL2Q9UBD3 114 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 C4orf3Q8WVX3 66 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 HIVEP2P31629 2446 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.96□□□□□ -1.94
SOX6-217ENST00000533870 MYLKQ15746 1914 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 H3BPC8 53 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 ZFP36P26651 326 aaKnown RBP2.96□□□□□ -1.94
SOX6-217ENST00000533870 APOC4P55056 127 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 KIR2DL5BQ8NHK3 375 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 LITAFQ99732 161 aa2.96□□□□□ -1.94
SOX6-217ENST00000533870 BPY2O14599 106 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 IGKV3D-7A0A0C4DH55 119 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 IGHV4-38-2P0DP08 117 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 DAD1P61803 113 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 SPAG11BQ08648 103 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 MAP6D1Q9H9H5 199 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 MRPL55Q7Z7F7 128 aaKnown RBP2.95□□□□□ -1.94
SOX6-217ENST00000533870 NOTCH2Q04721 2471 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 LOC110117498A0A087WWA1 95 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 EGFEM1PQ0D2K5 195 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 KLKP1Q107X0 134 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 DHRS4-AS1Q9P1J3 65 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 OTOGLQ3ZCN5 2332 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 NAV3Q8IVL0 2385 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 BRWD3Q6RI45 1802 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 HEATR5AQ86XA9 2040 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 MYO9BQ13459 2157 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 TRBV6-8A0A0A6YYG3 113 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 IGHV4-61A0A0C4DH41 118 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 IGKV3OR2-268A0A0C4DH90 116 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 GAS8-AS1O95177 125 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 ADORA2A-AS1P86434 159 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 NKAPP1Q8N9T2 125 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 FAM19A5Q7Z5A7 132 aaPredicted RBP2.95□□□□□ -1.94
SOX6-217ENST00000533870 DPH3Q96FX2 82 aa2.95□□□□□ -1.94
SOX6-217ENST00000533870 RPL37AP8A6NKH3 93 aa2.94□□□□□ -1.94
SOX6-217ENST00000533870 MIFP14174 115 aa2.94□□□□□ -1.94
SOX6-217ENST00000533870 VPREB1P12018 145 aa2.94□□□□□ -1.94
SOX6-217ENST00000533870 HIGD2BQ4VC39 106 aa2.94□□□□□ -1.94
SOX6-217ENST00000533870 SPG11Q96JI7 2443 aa2.94□□□□□ -1.94
SOX6-217ENST00000533870 ATG2BQ96BY7 2078 aa2.94□□□□□ -1.94
SOX6-217ENST00000533870 DOPEY2Q9Y3R5 2298 aa2.94□□□□□ -1.94
SOX6-217ENST00000533870 UBE2BP63146 152 aa2.94□□□□□ -1.94
SOX6-217ENST00000533870 DEFB112Q30KQ8 113 aa2.94□□□□□ -1.94
SOX6-217ENST00000533870 IGHV3-73A0A0B4J1V6 119 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 PLA2G5P39877 138 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 M0R378 163 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 LY6G6DO95868 133 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 ARHGEF17Q96PE2 2063 aaPredicted RBP2.93□□□□□ -1.94
SOX6-217ENST00000533870 IGHV3OR16-9A0A0B4J2B5 98 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 RNASE1P07998 156 aaKnown RBP2.93□□□□□ -1.94
SOX6-217ENST00000533870 C6orf99Q4VX62 202 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 TMEM254Q8TBM7 123 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 ICE1Q9Y2F5 2266 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 NUP210Q8TEM1 1887 aaPredicted RBP2.93□□□□□ -1.94
SOX6-217ENST00000533870 IGHV3-38A0A0C4DH36 116 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 SPART-AS1P0CW21 52 aa2.93□□□□□ -1.94
SOX6-217ENST00000533870 LINC00694P0DN24 101 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms