RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
CTSB-228ENST00000533455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.12□□□□□ -0.471e-6■■■■□ 21.7
CTSB-228ENST00000533455 IGHV3-73A0A0B4J1V6 119 aa12.12□□□□□ -0.47
CTSB-228ENST00000533455 CEMP1Q6PRD7 247 aaPredicted RBP12.12□□□□□ -0.47
CTSB-228ENST00000533455 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
CTSB-228ENST00000533455 USP24Q9UPU5 2620 aa12.12□□□□□ -0.47
CTSB-228ENST00000533455 KNCNA6PVL3 124 aa12.11□□□□□ -0.47
CTSB-228ENST00000533455 ADAMTSL4-AS1Q5T5F5 129 aa12.11□□□□□ -0.47
CTSB-228ENST00000533455 ZFAND6Q6FIF0 208 aa12.11□□□□□ -0.47
CTSB-228ENST00000533455 UBE2E2Q96LR5 201 aa12.11□□□□□ -0.47
CTSB-228ENST00000533455 DUX5Q96PT3 197 aa12.11□□□□□ -0.47
CTSB-228ENST00000533455 ICOSQ9Y6W8 199 aa12.11□□□□□ -0.47
CTSB-228ENST00000533455 ZFYVE26Q68DK2 2539 aa12.11□□□□□ -0.47
CTSB-228ENST00000533455 DSCR9P59020 149 aa12.11□□□□□ -0.47
CTSB-228ENST00000533455 TIMM17BO60830 172 aa12.1□□□□□ -0.47
CTSB-228ENST00000533455 ZNF415Q09FC8 603 aa12.1□□□□□ -0.47
CTSB-228ENST00000533455 RBMY1BA6NDE4 496 aaKnown RBP12.1□□□□□ -0.47
CTSB-228ENST00000533455 RBMY1EA6NEQ0 496 aaKnown RBP12.1□□□□□ -0.47
CTSB-228ENST00000533455 H3BMM0 161 aa12.1□□□□□ -0.47
CTSB-228ENST00000533455 RBMY1DP0C7P1 496 aaKnown RBP12.1□□□□□ -0.47
CTSB-228ENST00000533455 RNASE13Q5GAN3 156 aaKnown RBP12.09□□□□□ -0.47
CTSB-228ENST00000533455 Q6ZSN1 163 aa12.09□□□□□ -0.47
CTSB-228ENST00000533455 TEX29Q8N6K0 151 aa12.09□□□□□ -0.47
CTSB-228ENST00000533455 DNAJC30Q96LL9 226 aa12.09□□□□□ -0.47
CTSB-228ENST00000533455 DUX3Q96PT4 197 aa12.09□□□□□ -0.47
CTSB-228ENST00000533455 YAE1D1Q9NRH1 226 aa12.09□□□□□ -0.47
CTSB-228ENST00000533455 PRSS2P07478 247 aa12.08□□□□□ -0.48
CTSB-228ENST00000533455 DEFB131AP59861 70 aa12.08□□□□□ -0.48
CTSB-228ENST00000533455 LINC01356Q8N9X3 169 aa12.08□□□□□ -0.48
CTSB-228ENST00000533455 ZNF702PQ9H963 129 aa12.08□□□□□ -0.48
CTSB-228ENST00000533455 BEX4Q9NWD9 120 aaPredicted RBP12.08□□□□□ -0.48
CTSB-228ENST00000533455 VPREB3Q9UKI3 123 aa12.08□□□□□ -0.48
CTSB-228ENST00000533455 VPS13CQ709C8 3753 aa12.08□□□□□ -0.48
CTSB-228ENST00000533455 J3QLI3 93 aa12.08□□□□□ -0.48
CTSB-228ENST00000533455 LINC00467Q9BRT7 94 aa12.08□□□□□ -0.48
CTSB-228ENST00000533455 H3BT86 120 aa12.07□□□□□ -0.48
CTSB-228ENST00000533455 IFITM1P13164 125 aa12.07□□□□□ -0.48
CTSB-228ENST00000533455 HTN1P15515 57 aa12.07□□□□□ -0.48
CTSB-228ENST00000533455 UBE2WQ96B02 151 aa12.07□□□□□ -0.48
CTSB-228ENST00000533455 CLUHP3Q96NS8 147 aa12.07□□□□□ -0.48
CTSB-228ENST00000533455 COX6CP09669 75 aa12.06□□□□□ -0.48
CTSB-228ENST00000533455 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
CTSB-228ENST00000533455 Q9UF83 564 aa12.06□□□□□ -0.48
CTSB-228ENST00000533455 SORL1Q92673 2214 aa12.06□□□□□ -0.48
CTSB-228ENST00000533455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
CTSB-228ENST00000533455 IGLV5-45A0A087WSX0 123 aa12.06□□□□□ -0.48
CTSB-228ENST00000533455 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
CTSB-228ENST00000533455 IGHV3-53P01767 116 aa12.06□□□□□ -0.48
CTSB-228ENST00000533455 ANAPC13Q9BS18 74 aa12.06□□□□□ -0.48
CTSB-228ENST00000533455 FLNCQ14315 2725 aa12.05□□□□□ -0.48
CTSB-228ENST00000533455 TRAV8-4A0A0B4J246 113 aa12.05□□□□□ -0.48
CTSB-228ENST00000533455 TEX49A0A1B0GTD5 131 aa12.05□□□□□ -0.48
CTSB-228ENST00000533455 H7C423 109 aa12.05□□□□□ -0.48
CTSB-228ENST00000533455 TIRAPP58753 221 aa12.05□□□□□ -0.48
CTSB-228ENST00000533455 A0A096LNT2 108 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 A8MZ25 164 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 NDUFA1O15239 70 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 SNCGO76070 127 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 BEAN1Q3B7T3 259 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 Q6Q795 121 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 C2orf82Q6UX34 121 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 C11orf72Q8NBR9 251 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 CSPG4Q6UVK1 2322 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 LST1O00453 97 aa12.04□□□□□ -0.48
CTSB-228ENST00000533455 RS1O15537 224 aa12.03□□□□□ -0.48
CTSB-228ENST00000533455 PRM2P04554 102 aa12.03□□□□□ -0.48
CTSB-228ENST00000533455 SLURP1P55000 103 aa12.03□□□□□ -0.48
CTSB-228ENST00000533455 FSHBP01225 129 aa12.03□□□□□ -0.48
CTSB-228ENST00000533455 GAGE2BQ13066 116 aa12.03□□□□□ -0.48
CTSB-228ENST00000533455 GAGE2EQ4V326 116 aa12.03□□□□□ -0.48
CTSB-228ENST00000533455 Q6YL49 198 aa12.03□□□□□ -0.48
CTSB-228ENST00000533455 GAGE2DQ9UEU5 116 aa12.03□□□□□ -0.48
CTSB-228ENST00000533455 CDKN2A-AS1Q9UH64 79 aa12.02□□□□□ -0.49
CTSB-228ENST00000533455 EPG5Q9HCE0 2579 aa12.02□□□□□ -0.49
CTSB-228ENST00000533455 TRAV4A0A0B4J268 109 aa12.01□□□□□ -0.49
CTSB-228ENST00000533455 NPC2P61916 151 aa12.01□□□□□ -0.49
CTSB-228ENST00000533455 DEFB121Q5J5C9 76 aa12.01□□□□□ -0.49
CTSB-228ENST00000533455 Q6ZSV7 163 aa12.01□□□□□ -0.49
CTSB-228ENST00000533455 CRLF1O75462 422 aa12.01□□□□□ -0.49
CTSB-228ENST00000533455 MAP6D1Q9H9H5 199 aa12.01□□□□□ -0.49
CTSB-228ENST00000533455 IGHV3-38A0A0C4DH36 116 aa12□□□□□ -0.49
CTSB-228ENST00000533455 PRB1P04280 392 aa12□□□□□ -0.49
CTSB-228ENST00000533455 MRPL23Q16540 153 aaKnown RBP12□□□□□ -0.49
CTSB-228ENST00000533455 CLEC2BQ92478 149 aa12□□□□□ -0.49
CTSB-228ENST00000533455 TMEM101Q96IK0 257 aa12□□□□□ -0.49
CTSB-228ENST00000533455 PEMTQ9UBM1 199 aa12□□□□□ -0.49
CTSB-228ENST00000533455 IGLV5-39A0A0G2JS06 123 aa11.99□□□□□ -0.49
CTSB-228ENST00000533455 NHLRC4P0CG21 123 aaPredicted RBP11.99□□□□□ -0.49
CTSB-228ENST00000533455 DEFB136Q30KP8 78 aa11.99□□□□□ -0.49
CTSB-228ENST00000533455 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
CTSB-228ENST00000533455 LINC01587Q99440 93 aa11.99□□□□□ -0.49
CTSB-228ENST00000533455 UTP20O75691 2785 aaKnown RBP11.99□□□□□ -0.49
CTSB-228ENST00000533455 INSP01308 110 aa11.99□□□□□ -0.49
CTSB-228ENST00000533455 FAM19A3Q7Z5A8 133 aa11.99□□□□□ -0.49
CTSB-228ENST00000533455 FAM240AA0A1B0GVK7 77 aa11.98□□□□□ -0.49
CTSB-228ENST00000533455 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.98□□□□□ -0.49
CTSB-228ENST00000533455 NRGNQ92686 78 aa11.98□□□□□ -0.49
CTSB-228ENST00000533455 MYO18BQ8IUG5 2567 aa11.98□□□□□ -0.49
CTSB-228ENST00000533455 USP9XQ93008 2570 aaPredicted RBP11.98□□□□□ -0.49
CTSB-228ENST00000533455 NDUFV3P56181 108 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms