RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 LINC00526Q96FQ7 95 aa8.11□□□□□ -1.11
COPB1-209ENST00000533096 SRSF9Q13242 221 aaKnown RBP eCLIP8.1□□□□□ -1.11
COPB1-209ENST00000533096 COTL1Q14019 142 aa8.1□□□□□ -1.11
COPB1-209ENST00000533096 RNASEKQ6P5S7 137 aaKnown RBP8.1□□□□□ -1.11
COPB1-209ENST00000533096 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
COPB1-209ENST00000533096 TCEAL7Q9BRU2 100 aa8.1□□□□□ -1.11
COPB1-209ENST00000533096 MLST8Q9BVC4 326 aa8.1□□□□□ -1.11
COPB1-209ENST00000533096 NIT2Q9NQR4 276 aa8.1□□□□□ -1.11
COPB1-209ENST00000533096 PFDN1O60925 122 aa8.09□□□□□ -1.11
COPB1-209ENST00000533096 AMMECR1LQ6DCA0 310 aa8.09□□□□□ -1.11
COPB1-209ENST00000533096 Q6ZRP5 223 aa8.09□□□□□ -1.11
COPB1-209ENST00000533096 FER1L6-AS1Q8NA97 138 aa8.09□□□□□ -1.11
COPB1-209ENST00000533096 OR2D3Q8NGH3 330 aa8.09□□□□□ -1.11
COPB1-209ENST00000533096 FAM213BQ8TBF2 198 aa8.08□□□□□ -1.12
COPB1-209ENST00000533096 GIPP09681 153 aaPredicted RBP8.06□□□□□ -1.12
COPB1-209ENST00000533096 NTF3P20783 257 aa8.06□□□□□ -1.12
COPB1-209ENST00000533096 RPL35P42766 123 aaKnown RBP8.06□□□□□ -1.12
COPB1-209ENST00000533096 XCL1P47992 114 aa8.06□□□□□ -1.12
COPB1-209ENST00000533096 CACNG7P62955 275 aa8.06□□□□□ -1.12
COPB1-209ENST00000533096 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
COPB1-209ENST00000533096 PGLYRP4Q96LB8 373 aa8.06□□□□□ -1.12
COPB1-209ENST00000533096 CYTL1Q9NRR1 136 aa8.06□□□□□ -1.12
COPB1-209ENST00000533096 LINC00474Q9P2X8 69 aa8.06□□□□□ -1.12
COPB1-209ENST00000533096 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.05□□□□□ -1.12
COPB1-209ENST00000533096 IGKV2-29A2NJV5 120 aaPredicted RBP8.05□□□□□ -1.12
COPB1-209ENST00000533096 FAM231BA6NCW3 169 aa8.05□□□□□ -1.12
COPB1-209ENST00000533096 ARPC5O15511 151 aa8.05□□□□□ -1.12
COPB1-209ENST00000533096 IGLC6P0CF74 106 aa8.05□□□□□ -1.12
COPB1-209ENST00000533096 GAGE2BQ13066 116 aa8.05□□□□□ -1.12
COPB1-209ENST00000533096 LYZL1Q6UWQ5 148 aa8.05□□□□□ -1.12
COPB1-209ENST00000533096 TNXBP22105 4242 aa8.05□□□□□ -1.12
COPB1-209ENST00000533096 GVQW2A0A096LPI5 108 aaPredicted RBP8.04□□□□□ -1.12
COPB1-209ENST00000533096 IFNA1P01562 189 aa8.04□□□□□ -1.12
COPB1-209ENST00000533096 TRGC1P0CF51 173 aa8.04□□□□□ -1.12
COPB1-209ENST00000533096 RPS20P60866 119 aaKnown RBP8.04□□□□□ -1.12
COPB1-209ENST00000533096 FOXI1Q12951 378 aa8.04□□□□□ -1.12
COPB1-209ENST00000533096 TRAV26-2A0A0B4J265 109 aa8.03□□□□□ -1.12
COPB1-209ENST00000533096 RAB19A4D1S5 217 aa8.03□□□□□ -1.12
COPB1-209ENST00000533096 F2Z2F3 143 aa8.03□□□□□ -1.12
COPB1-209ENST00000533096 TWIST1Q15672 202 aa8.03□□□□□ -1.12
COPB1-209ENST00000533096 MBD3L1Q8WWY6 194 aa8.03□□□□□ -1.12
COPB1-209ENST00000533096 CARD19Q96LW7 228 aa8.03□□□□□ -1.12
COPB1-209ENST00000533096 ZNF561-AS1K7EIQ3 104 aa8.02□□□□□ -1.13
COPB1-209ENST00000533096 CCL25O15444 150 aa8.02□□□□□ -1.13
COPB1-209ENST00000533096 FGF6P10767 208 aa8.02□□□□□ -1.13
COPB1-209ENST00000533096 CENPWQ5EE01 88 aa8.02□□□□□ -1.13
COPB1-209ENST00000533096 Q6ZNX1 250 aa8.02□□□□□ -1.13
COPB1-209ENST00000533096 IGHV1-58A0A0C4DH39 117 aa8.01□□□□□ -1.13
COPB1-209ENST00000533096 A0A1W2PNN7 141 aa8.01□□□□□ -1.13
COPB1-209ENST00000533096 XKRY2A2RUG3 117 aa8.01□□□□□ -1.13
COPB1-209ENST00000533096 MT-ND6P03923 174 aa8.01□□□□□ -1.13
COPB1-209ENST00000533096 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
COPB1-209ENST00000533096 CCL20P78556 96 aa8.01□□□□□ -1.13
COPB1-209ENST00000533096 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
COPB1-209ENST00000533096 GATD1Q8NB37 220 aa8.01□□□□□ -1.13
COPB1-209ENST00000533096 RPL39LQ96EH5 51 aaKnown RBP8.01□□□□□ -1.13
COPB1-209ENST00000533096 BTF3L4Q96K17 158 aa8.01□□□□□ -1.13
COPB1-209ENST00000533096 LINC00959A0A1B0GUT2 108 aa8□□□□□ -1.13
COPB1-209ENST00000533096 SMLR1H3BR10 107 aa8□□□□□ -1.13
COPB1-209ENST00000533096 PMCHP20382 165 aa8□□□□□ -1.13
COPB1-209ENST00000533096 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
COPB1-209ENST00000533096 TMEM101Q96IK0 257 aa8□□□□□ -1.13
COPB1-209ENST00000533096 GNG13Q9P2W3 67 aa8□□□□□ -1.13
COPB1-209ENST00000533096 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
COPB1-209ENST00000533096 APCSP02743 223 aa7.99□□□□□ -1.13
COPB1-209ENST00000533096 C1orf137Q5JT78 98 aa7.99□□□□□ -1.13
COPB1-209ENST00000533096 OR5A1Q8NGJ0 315 aa7.99□□□□□ -1.13
COPB1-209ENST00000533096 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
COPB1-209ENST00000533096 C19orf71A6NCJ1 209 aa7.98□□□□□ -1.13
COPB1-209ENST00000533096 UMAD1C9J7I0 102 aa7.98□□□□□ -1.13
COPB1-209ENST00000533096 GNG4P50150 75 aa7.98□□□□□ -1.13
COPB1-209ENST00000533096 PTTG1IPP53801 180 aa7.98□□□□□ -1.13
COPB1-209ENST00000533096 FOXA3P55318 350 aaPredicted RBP7.98□□□□□ -1.13
COPB1-209ENST00000533096 SS18Q15532 418 aa7.98□□□□□ -1.13
COPB1-209ENST00000533096 ZNF664Q8N3J9 261 aa7.98□□□□□ -1.13
COPB1-209ENST00000533096 C9orf62Q8N4C0 152 aa7.98□□□□□ -1.13
COPB1-209ENST00000533096 IGLV4-69A0A075B6H9 119 aa7.97□□□□□ -1.13
COPB1-209ENST00000533096 LOC107984640A0A0U1RRK4 108 aa7.97□□□□□ -1.13
COPB1-209ENST00000533096 G3V3Q6 166 aa7.97□□□□□ -1.13
COPB1-209ENST00000533096 BCL2P10415 239 aa7.97□□□□□ -1.13
COPB1-209ENST00000533096 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
COPB1-209ENST00000533096 SDHAF1A6NFY7 115 aa7.96□□□□□ -1.14
COPB1-209ENST00000533096 H7C423 109 aa7.96□□□□□ -1.14
COPB1-209ENST00000533096 NCR2O95944 276 aa7.96□□□□□ -1.14
COPB1-209ENST00000533096 MALP21145 153 aa7.96□□□□□ -1.14
COPB1-209ENST00000533096 PRR4Q16378 134 aa7.96□□□□□ -1.14
COPB1-209ENST00000533096 C9orf116Q5BN46 136 aaPredicted RBP7.96□□□□□ -1.14
COPB1-209ENST00000533096 SMIM15Q7Z3B0 74 aa7.96□□□□□ -1.14
COPB1-209ENST00000533096 NUDT10Q8NFP7 164 aa7.96□□□□□ -1.14
COPB1-209ENST00000533096 NUDT11Q96G61 164 aa7.96□□□□□ -1.14
COPB1-209ENST00000533096 MED9Q9NWA0 146 aa7.96□□□□□ -1.14
COPB1-209ENST00000533096 LPAP08519 4548 aa7.95□□□□□ -1.14
COPB1-209ENST00000533096 CAMPP49913 170 aa7.95□□□□□ -1.14
COPB1-209ENST00000533096 ISOC2Q96AB3 205 aa7.95□□□□□ -1.14
COPB1-209ENST00000533096 OPRPNQ99935 248 aaPredicted RBP7.95□□□□□ -1.14
COPB1-209ENST00000533096 A0A087WZ39 114 aa7.94□□□□□ -1.14
COPB1-209ENST00000533096 I3L3M4 83 aa7.94□□□□□ -1.14
COPB1-209ENST00000533096 ZNF25P17030 456 aaPredicted RBP7.94□□□□□ -1.14
COPB1-209ENST00000533096 RPL18AQ02543 176 aaKnown RBP7.94□□□□□ -1.14
COPB1-209ENST00000533096 CD164L2Q6UWJ8 174 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms