RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 WNK3Q9BYP7 1800 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 H3BRM9 83 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 M0QZK8 103 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 CRYGSP22914 178 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 PSG9Q00887 426 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 DIAPH2-AS1Q14236 149 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 VMA21Q3ZAQ7 101 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 ZCCHC23Q6ZST2 131 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 MORN4Q8NDC4 146 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 ZNF431Q8TF32 576 aaPredicted RBP0.85□□□□□ -2.27
CD44-234ENST00000531873 NAT14Q8WUY8 206 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 PYDC1Q8WXC3 89 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 NABP2Q9BQ15 211 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 CST11Q9H112 138 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 TMEM14CQ9P0S9 112 aa0.85□□□□□ -2.27
CD44-234ENST00000531873 AFDNP55196 1824 aaKnown RBP0.85□□□□□ -2.27
CD44-234ENST00000531873 VPS13CQ709C8 3753 aa0.84□□□□□ -2.27
CD44-234ENST00000531873 TRAV36DV7A0A075B6V5 113 aa0.84□□□□□ -2.27
CD44-234ENST00000531873 DEGS1O15121 323 aa0.84□□□□□ -2.27
CD44-234ENST00000531873 IGHV3-33P01772 117 aa0.84□□□□□ -2.27
CD44-234ENST00000531873 RPL22P35268 128 aaKnown RBP0.84□□□□□ -2.27
CD44-234ENST00000531873 BRK1Q8WUW1 75 aa0.84□□□□□ -2.27
CD44-234ENST00000531873 CLEC2BQ92478 149 aa0.84□□□□□ -2.27
CD44-234ENST00000531873 TMEM138Q9NPI0 162 aa0.84□□□□□ -2.27
CD44-234ENST00000531873 JPT1Q9UK76 154 aa0.84□□□□□ -2.27
CD44-234ENST00000531873 KNL1Q8NG31 2342 aa0.84□□□□□ -2.28
CD44-234ENST00000531873 CDK5RAP2Q96SN8 1893 aa0.84□□□□□ -2.28
CD44-234ENST00000531873 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.28
CD44-234ENST00000531873 HELZP42694 1942 aaKnown RBP0.83□□□□□ -2.28
CD44-234ENST00000531873 LOC285556D6RIA3 1793 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 KIAA1549LQ6ZVL6 1849 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 A0A1B0GX51 115 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 ARL5CA6NH57 179 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 J3KT08 172 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 TRACP01848 142 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 TPT1P13693 172 aaKnown RBP0.83□□□□□ -2.28
CD44-234ENST00000531873 SDC4P31431 198 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 MAXP61244 160 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 OR8B8Q15620 311 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 KRTAP20-1Q3LI63 56 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 AKAP9Q99996 3911 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 PLCE1Q9P212 2302 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 PPLO60437 1756 aa0.83□□□□□ -2.28
CD44-234ENST00000531873 GOLGA4Q13439 2230 aaKnown RBP0.83□□□□□ -2.28
CD44-234ENST00000531873 MAP2P11137 1827 aaKnown RBP0.82□□□□□ -2.28
CD44-234ENST00000531873 SYNE2Q8WXH0 6885 aaKnown RBP0.82□□□□□ -2.28
CD44-234ENST00000531873 A0A096LPI6 279 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 A0A1B0GW64 132 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 C5orf58C9J3I9 102 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 SCGB1A1P11684 91 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 SLC25A4P12235 298 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 CCL4P13236 92 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 ALX1Q15699 326 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 HAGHLQ6PII5 290 aaPredicted RBP0.82□□□□□ -2.28
CD44-234ENST00000531873 OR51A4Q8NGJ6 313 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 WFDC10AQ9H1F0 79 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 MYO7AQ13402 2215 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 ARFGEF2Q9Y6D5 1785 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 LAMA4Q16363 1823 aa0.82□□□□□ -2.28
CD44-234ENST00000531873 ATG2AQ2TAZ0 1938 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 MYH13Q9UKX3 1938 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 MUC22E2RYF6 1773 aaPredicted RBP0.81□□□□□ -2.28
CD44-234ENST00000531873 AKAP6Q13023 2319 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 ANK2Q01484 3957 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 IGLV3-32A0A0A0MS00 114 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.81□□□□□ -2.28
CD44-234ENST00000531873 JMJD7-PLA2G4BH0Y9G9 81 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 PPYP01298 95 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 IGLV3-1P01715 115 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 HBDP02042 147 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 TCRAP04437 139 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 SLC25A5P05141 298 aaKnown RBP0.81□□□□□ -2.28
CD44-234ENST00000531873 SAA1P0DJI8 122 aaPredicted RBP0.81□□□□□ -2.28
CD44-234ENST00000531873 CD52P31358 61 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 ASIPP42127 132 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 SRP9P49458 86 aaKnown RBP0.81□□□□□ -2.28
CD44-234ENST00000531873 BLCAPP62952 87 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 GLIPR1L1Q6UWM5 242 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 OR8I2Q8N0Y5 310 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 OR5A2Q8NGI9 324 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 ANP32BQ92688 251 aaKnown RBP0.81□□□□□ -2.28
CD44-234ENST00000531873 AMELYQ99218 206 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 BATF3Q9NR55 127 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 TNFSF18Q9UNG2 199 aa0.81□□□□□ -2.28
CD44-234ENST00000531873 KNTC1P50748 2209 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 PKDREJQ9NTG1 2253 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 A0A0J9YY99 117 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 C3orf85A0A1B0GTC6 90 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 C9JAW5 83 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 ARPC5O15511 151 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 LY6G6CO95867 125 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 MT-ND4LP03901 98 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 SCTP09683 121 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 TMEM244Q5VVB8 128 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 SBSPONQ8IVN8 264 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 C5orf17Q8NAS9 161 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 PLPP5Q8NEB5 264 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 OR5AK2Q8NH90 309 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 SPANXA1Q9NS26 97 aa0.8□□□□□ -2.28
CD44-234ENST00000531873 HIGD1AQ9Y241 93 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms