RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ATP1A1-AS1Q5TC04 95 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-214ENST00000530886 IGF1P05019 195 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 RPL28P46779 137 aaKnown RBP5.95□□□□□ -1.46
CSDE1-214ENST00000530886 XCL1P47992 114 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 NDPQ00604 133 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 FAM218AQ96MZ4 157 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 XCL2Q9UBD3 114 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 A0A087WVE0 104 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 RBMY1BA6NDE4 496 aaKnown RBP5.94□□□□□ -1.46
CSDE1-214ENST00000530886 RBMY1EA6NEQ0 496 aaKnown RBP5.94□□□□□ -1.46
CSDE1-214ENST00000530886 GNRH2O43555 120 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 RBMY1DP0C7P1 496 aaKnown RBP5.94□□□□□ -1.46
CSDE1-214ENST00000530886 RBMY1A1P0DJD3 496 aaKnown RBP5.94□□□□□ -1.46
CSDE1-214ENST00000530886 RBMY1CP0DJD4 496 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 RBMY1FQ15415 496 aaKnown RBP5.94□□□□□ -1.46
CSDE1-214ENST00000530886 C20orf173Q96LM9 149 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 SOCS3O14543 225 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 IGHV3-23P01764 117 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 KLKP1Q107X0 134 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 C1orf195Q5TG92 126 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 FAM223AQ8IWN6 122 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 FAM215AQ9Y5M1 114 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 Q8N6K4 173 aa5.94□□□□□ -1.46
CSDE1-214ENST00000530886 KNCNA6PVL3 124 aa5.93□□□□□ -1.46
CSDE1-214ENST00000530886 GHRHP01286 108 aa5.93□□□□□ -1.46
CSDE1-214ENST00000530886 ICE1Q9Y2F5 2266 aa5.93□□□□□ -1.46
CSDE1-214ENST00000530886 PRRC2AP48634 2157 aaKnown RBP5.93□□□□□ -1.46
CSDE1-214ENST00000530886 TRAV12-3A0A0B4J271 114 aa5.93□□□□□ -1.46
CSDE1-214ENST00000530886 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-214ENST00000530886 C16orf92Q96LL3 132 aa5.93□□□□□ -1.46
CSDE1-214ENST00000530886 PKIGQ9Y2B9 76 aa5.93□□□□□ -1.46
CSDE1-214ENST00000530886 KLLNB2CW77 178 aa5.93□□□□□ -1.46
CSDE1-214ENST00000530886 RPL11P62913 178 aaKnown RBP5.93□□□□□ -1.46
CSDE1-214ENST00000530886 HIST2H2BCQ6DN03 193 aa5.93□□□□□ -1.46
CSDE1-214ENST00000530886 HIST2H2BDQ6DRA6 164 aa5.93□□□□□ -1.46
CSDE1-214ENST00000530886 TRBV12-3P01733 135 aa5.92□□□□□ -1.46
CSDE1-214ENST00000530886 CD28P10747 220 aa5.92□□□□□ -1.46
CSDE1-214ENST00000530886 DPM3Q9P2X0 92 aa5.92□□□□□ -1.46
CSDE1-214ENST00000530886 IGLV5-39A0A0G2JS06 123 aa5.91□□□□□ -1.46
CSDE1-214ENST00000530886 PRB3Q04118 309 aaPredicted RBP5.91□□□□□ -1.46
CSDE1-214ENST00000530886 RNASE6Q93091 150 aaKnown RBP5.91□□□□□ -1.46
CSDE1-214ENST00000530886 CCDC140Q96MF4 163 aa5.91□□□□□ -1.46
CSDE1-214ENST00000530886 ZNF318Q5VUA4 2279 aa5.91□□□□□ -1.46
CSDE1-214ENST00000530886 AHCTF1Q8WYP5 2266 aa5.91□□□□□ -1.46
CSDE1-214ENST00000530886 TRAV7A0A075B6U4 112 aa5.91□□□□□ -1.46
CSDE1-214ENST00000530886 F5H697 171 aa5.91□□□□□ -1.46
CSDE1-214ENST00000530886 EDN2P20800 178 aa5.91□□□□□ -1.46
CSDE1-214ENST00000530886 CFHR3Q02985 330 aa5.91□□□□□ -1.46
CSDE1-214ENST00000530886 ODF3BA8MYP8 253 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 C15orf32Q32M92 178 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 SOSTDC1Q6X4U4 206 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 FAM19A3Q7Z5A8 133 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 CCL17Q92583 94 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 CSMD2Q7Z408 3487 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 IGHV3OR16-8A0A075B7F1 116 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 A0A087WWL8 130 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 TRAV13-2A0A0B4J235 113 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 CCKP06307 115 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 C14orf132Q9NPU4 83 aa5.9□□□□□ -1.46
CSDE1-214ENST00000530886 IGHV3-66A0A0C4DH42 116 aa5.9□□□□□ -1.47
CSDE1-214ENST00000530886 COX7A1P24310 79 aa5.9□□□□□ -1.47
CSDE1-214ENST00000530886 FAM27E3Q08E93 113 aa5.9□□□□□ -1.47
CSDE1-214ENST00000530886 C20orf197Q8N268 126 aa5.9□□□□□ -1.47
CSDE1-214ENST00000530886 IGHV7-81A0A0B4J1V7 117 aa5.89□□□□□ -1.47
CSDE1-214ENST00000530886 H0YGX0 51 aa5.89□□□□□ -1.47
CSDE1-214ENST00000530886 NDUFC1O43677 76 aa5.89□□□□□ -1.47
CSDE1-214ENST00000530886 C9orf129Q5T035 196 aaKnown RBP5.89□□□□□ -1.47
CSDE1-214ENST00000530886 A8MZ25 164 aa5.89□□□□□ -1.47
CSDE1-214ENST00000530886 C1orf158Q8N1D5 194 aa5.89□□□□□ -1.47
CSDE1-214ENST00000530886 IGHV3-16A0A0C4DH30 117 aa5.88□□□□□ -1.47
CSDE1-214ENST00000530886 DEFB104AQ8WTQ1 72 aa5.88□□□□□ -1.47
CSDE1-214ENST00000530886 FDCSPQ8NFU4 85 aa5.88□□□□□ -1.47
CSDE1-214ENST00000530886 ZNF625Q96I27 306 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-214ENST00000530886 Q9HAA7 133 aa5.88□□□□□ -1.47
CSDE1-214ENST00000530886 CRYBG3Q68DQ2 2970 aa5.88□□□□□ -1.47
CSDE1-214ENST00000530886 IGHV3-35A0A0C4DH35 117 aa5.87□□□□□ -1.47
CSDE1-214ENST00000530886 NACAE9PAV3 2078 aa5.87□□□□□ -1.47
CSDE1-214ENST00000530886 HILS1P60008 231 aa5.87□□□□□ -1.47
CSDE1-214ENST00000530886 CDSNQ15517 529 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 WFDC11Q8NEX6 87 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 LINC00167Q96N53 147 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 URB1O60287 2271 aaKnown RBP5.86□□□□□ -1.47
CSDE1-214ENST00000530886 TRBV7-6A0A0J9YX20 115 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 C6orf226Q5I0X4 101 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 CLEC19AQ6UXS0 136 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 CHCHD7Q9BUK0 85 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 Q9H8V8 135 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 MINOS1Q5TGZ0 78 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 CDKN2A-AS1Q9UH64 79 aa5.86□□□□□ -1.47
CSDE1-214ENST00000530886 TRAV23DV6A0A075B6W5 121 aa5.85□□□□□ -1.47
CSDE1-214ENST00000530886 IGHV3OR16-13A0A075B7E8 117 aa5.85□□□□□ -1.47
CSDE1-214ENST00000530886 A0A087WYN8 130 aa5.85□□□□□ -1.47
CSDE1-214ENST00000530886 IGHV3-74A0A0B4J1X5 117 aa5.85□□□□□ -1.47
CSDE1-214ENST00000530886 SS18Q15532 418 aa5.85□□□□□ -1.47
CSDE1-214ENST00000530886 Q8N9W7 124 aa5.85□□□□□ -1.47
CSDE1-214ENST00000530886 IBA57-AS1B1ANH7 110 aa5.85□□□□□ -1.47
CSDE1-214ENST00000530886 JMJD7-PLA2G4BH0Y9G9 81 aa5.84□□□□□ -1.47
CSDE1-214ENST00000530886 C19orf54Q5BKX5 351 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms