RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 ANKRD29Q8N6D5 301 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 FMC1Q96HJ9 113 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 FAM167A-AS1Q96KT0 104 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 PRELID3AQ96N28 172 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 CYTL1Q9NRR1 136 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 TMEM14CQ9P0S9 112 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 TIMM9Q9Y5J7 89 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 M0R2P5 195 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 DEFB1P60022 68 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 SERF2P84101 59 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 RPL18AQ02543 176 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 C12orf74Q32Q52 190 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 GDF5OSQ5U4N7 250 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 IGFL4Q6B9Z1 124 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 RPL7L1Q6DKI1 246 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 OR10G8Q8NGN5 311 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 RAB37Q96AX2 223 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 OVOL2Q9BRP0 275 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 SLC25A2Q9BXI2 301 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 MANBALQ9NQG1 85 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 TRBV19A0A075B6N1 114 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 A0A0J9YX75 114 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 hDV102S1A0JD36 115 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 F6UB75 175 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 SYS1-DBNDD2H3BUS1 97 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 GIG44P09565 113 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 HLA-DRB4P13762 266 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 HLA-DMBP28068 263 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 ASIPP42127 132 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 WFDC2Q14508 124 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 RRN3P1Q2M238 152 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 ETDBQ3ZM63 59 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 EBLN2Q6P2I7 272 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 TMEM256Q8N2U0 113 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 RNF182Q8N6D2 247 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 NUP35Q8NFH5 326 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 PHLDA1Q8WV24 401 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 SLC50A1Q9BRV3 221 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 GNB1LQ9BYB4 327 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 HLA-DRB4X5D2U9 266 aa4.56□□□□□ -1.68
ATPAF1-209ENST00000529214 NBEAL2Q6ZNJ1 2754 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 A8MTW9 85 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 SMKR1H3BMG3 65 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 H3BMG7 143 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 P0DMU3 169 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 FAM231AP0DMU4 169 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 FAM231CP0DMU5 169 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 PYYP10082 97 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 PDE6HQ13956 83 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 DEFB135Q30KP9 77 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 SPATA12Q7Z6I5 190 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 RPP25LQ8N5L8 163 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 CYB561D1Q8N8Q1 229 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 CSNK1G2-AS1Q8NCQ2 148 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 FXYD5Q96DB9 178 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 WWC2-AS2Q96NR7 200 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 PAXXQ9BUH6 204 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 LAMTOR3Q9UHA4 124 aa4.55□□□□□ -1.68
ATPAF1-209ENST00000529214 AGRNO00468 2067 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 IGKV3-20P01619 116 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 TRACP01848 142 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 ATP5G1P05496 136 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 SRP19P09132 144 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 CRYGAP11844 174 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 DAZ2Q13117 558 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 SH2D6Q7Z4S9 175 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 DAZ4Q86SG3 579 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 OR8A1Q8NGG7 326 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 FAM213BQ8TBF2 198 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 PPDPFLQ8WWR9 84 aa4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 DAZ3Q9NR90 486 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-209ENST00000529214 PRAC2D3DTV9 90 aa4.53□□□□□ -1.68
ATPAF1-209ENST00000529214 NUPR1O60356 82 aa4.53□□□□□ -1.68
ATPAF1-209ENST00000529214 ZNF506Q5JVG8 444 aa4.53□□□□□ -1.68
ATPAF1-209ENST00000529214 LYPD1Q8N2G4 141 aa4.53□□□□□ -1.68
ATPAF1-209ENST00000529214 IGF2BP2-AS1Q96M15 143 aa4.53□□□□□ -1.68
ATPAF1-209ENST00000529214 C18orf15Q96N68 181 aa4.53□□□□□ -1.68
ATPAF1-209ENST00000529214 XCL2Q9UBD3 114 aa4.53□□□□□ -1.68
ATPAF1-209ENST00000529214 TRAPPC1Q9Y5R8 145 aa4.53□□□□□ -1.68
ATPAF1-209ENST00000529214 LYRM9A8MSI8 78 aa4.52□□□□□ -1.69
ATPAF1-209ENST00000529214 M0R3E3 92 aa4.52□□□□□ -1.69
ATPAF1-209ENST00000529214 PRB4P10163 310 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-209ENST00000529214 FXYD7P58549 80 aa4.52□□□□□ -1.69
ATPAF1-209ENST00000529214 ICAM4Q14773 271 aa4.52□□□□□ -1.69
ATPAF1-209ENST00000529214 Q6ZRU5 148 aa4.52□□□□□ -1.69
ATPAF1-209ENST00000529214 OTORQ9NRC9 128 aa4.52□□□□□ -1.69
ATPAF1-209ENST00000529214 TRAV4A0A0B4J268 109 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 RBAKDNA6NC62 111 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 PGPA6NDG6 321 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 SERF1AO75920 110 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 ARL14EPLP0DKL9 152 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 UBE2L3P68036 154 aaKnown RBP4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 ZNF726P1Q15940 193 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 ZNF493Q6ZR52 646 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 TMEM136Q6ZRR5 245 aa4.51□□□□□ -1.69
ATPAF1-209ENST00000529214 BAGE3Q86Y29 109 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms