RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 TRBV25-1A0A075B6N4 114 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 TRAV8-6A0A0B4J262 113 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 A0A1B0GUV1 79 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 RPS10P46783 165 aaKnown RBP4.31□□□□□ -1.72
MACF1-228ENST00000528611 SSTP61278 116 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 Q0VG73 95 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 COTL1Q14019 142 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 ORMDL2Q53FV1 153 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 LYPD5Q6UWN5 251 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 Q6ZSN1 163 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 Q8N8P6 123 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 SMIM2Q9BVW6 85 aa4.31□□□□□ -1.72
MACF1-228ENST00000528611 MRPS16Q9Y3D3 137 aaKnown RBP4.31□□□□□ -1.72
MACF1-228ENST00000528611 CSDC2Q9Y534 153 aaKnown RBP4.31□□□□□ -1.72
MACF1-228ENST00000528611 TRAV9-2A0A087WT02 112 aa4.3□□□□□ -1.72
MACF1-228ENST00000528611 IGHV1-24A0A0C4DH33 117 aa4.3□□□□□ -1.72
MACF1-228ENST00000528611 A0A0J9YY99 117 aa4.3□□□□□ -1.72
MACF1-228ENST00000528611 GAGE12JA6NER3 117 aa4.3□□□□□ -1.72
MACF1-228ENST00000528611 ZNF25P17030 456 aaPredicted RBP4.3□□□□□ -1.72
MACF1-228ENST00000528611 GAGE1Q13065 139 aa4.3□□□□□ -1.72
MACF1-228ENST00000528611 GAGE4Q13068 117 aa4.3□□□□□ -1.72
MACF1-228ENST00000528611 GAGE5Q13069 117 aa4.3□□□□□ -1.72
MACF1-228ENST00000528611 GAGE13Q4V321 117 aa4.3□□□□□ -1.72
MACF1-228ENST00000528611 C10orf126Q8N4M7 172 aa4.3□□□□□ -1.72
MACF1-228ENST00000528611 CHCHD1Q96BP2 118 aaKnown RBP4.3□□□□□ -1.72
MACF1-228ENST00000528611 IGLV2-18A0A075B6J9 118 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 TRAV26-2A0A0B4J265 109 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 CCL25O15444 150 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 NUDT3O95989 172 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 NPYP01303 97 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 TRGC2P03986 189 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 LINC00614P0C842 121 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 ESDP10768 282 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 MRPL52Q86TS9 123 aaKnown RBP4.29□□□□□ -1.72
MACF1-228ENST00000528611 PRSS3P2Q8NHM4 247 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 C18orf32Q8TCD1 76 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 TIMM21Q9BVV7 248 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 PYGO1Q9Y3Y4 419 aa4.29□□□□□ -1.72
MACF1-228ENST00000528611 C1orf196B1AJZ1 125 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 DNAH10OSP0CZ25 163 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 FCER1GP30273 86 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 LAGE3Q14657 143 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 ESRGQ1W209 222 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 TTC32Q5I0X7 151 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 COA6Q5JTJ3 125 aaKnown RBP4.28□□□□□ -1.72
MACF1-228ENST00000528611 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 RPL39LQ96EH5 51 aaKnown RBP4.28□□□□□ -1.72
MACF1-228ENST00000528611 PACRGQ96M98 296 aaPredicted RBP4.28□□□□□ -1.72
MACF1-228ENST00000528611 TMEM243Q9BU79 118 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 KRTAP4-5Q9BYR2 181 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 AP5S1Q9NUS5 200 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 DNAH7Q8WXX0 4024 aa4.28□□□□□ -1.72
MACF1-228ENST00000528611 IGHV3-38A0A0C4DH36 116 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 LOC100131303A0A0U1RQF7 123 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 UBE2L6O14933 153 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 SIVA1O15304 175 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 AMTP48728 403 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 NTM-AS1Q6ZSK4 140 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 FA2HQ7L5A8 372 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 NIT1Q86X76 327 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 C20orf203Q8NBC4 194 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 Q9H8V8 135 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 SPANXA1Q9NS26 97 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 LINC00588Q9Y4M8 146 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 COX11Q9Y6N1 276 aa4.27□□□□□ -1.73
MACF1-228ENST00000528611 A0A087WX48 190 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 TRAV8-4A0A0B4J246 113 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 SMKR1H3BMG3 65 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 SCO1O75880 301 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 TSHBP01222 138 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 MRPS36P82909 103 aaKnown RBP4.26□□□□□ -1.73
MACF1-228ENST00000528611 KIAA1644Q3SXP7 199 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 UBE2DNLQ8IWF7 75 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 LINC00476Q8WZB0 136 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 TMEM141Q96I45 108 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 TIMM17AQ99595 171 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 Q9UF83 564 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 CYSLTR1Q9Y271 337 aa4.26□□□□□ -1.73
MACF1-228ENST00000528611 DYNC2H1Q8NCM8 4307 aaKnown RBP4.25□□□□□ -1.73
MACF1-228ENST00000528611 TRAV8-3A0A0A6YYJ7 113 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 HIST1H2BKO60814 126 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 HSBP1O75506 76 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 GAS8-AS1O95177 125 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 HIST1H2BJP06899 126 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 HIST1H2BOP23527 126 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 HIST1H2BBP33778 126 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 IFI27P40305 119 aaPredicted RBP4.25□□□□□ -1.73
MACF1-228ENST00000528611 AKR1D1P51857 326 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 HIST1H2BDP58876 126 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 HIST1H2BCP62807 126 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 HIST2H2BEQ16778 126 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.25□□□□□ -1.73
MACF1-228ENST00000528611 ZFAND6Q6FIF0 208 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 ERASQ7Z444 233 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 NFE4Q86UQ8 179 aa4.25□□□□□ -1.73
MACF1-228ENST00000528611 BAGE3Q86Y29 109 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms