RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 WFDC10AQ9H1F0 79 aa10.61□□□□□ -0.71
ECHDC1-220ENST00000528402 NOP10Q9NPE3 64 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-220ENST00000528402 DAZ3Q9NR90 486 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-220ENST00000528402 NOTCH2Q04721 2471 aa10.61□□□□□ -0.71
ECHDC1-220ENST00000528402 TRBV25-1A0A075B6N4 114 aa10.6□□□□□ -0.71
ECHDC1-220ENST00000528402 K7EQD1 137 aa10.6□□□□□ -0.71
ECHDC1-220ENST00000528402 ZNF25P17030 456 aaPredicted RBP10.6□□□□□ -0.71
ECHDC1-220ENST00000528402 Q6ZTI0 123 aa10.6□□□□□ -0.71
ECHDC1-220ENST00000528402 TIMM21Q9BVV7 248 aa10.6□□□□□ -0.71
ECHDC1-220ENST00000528402 TP73-AS1Q9UF72 201 aa10.6□□□□□ -0.71
ECHDC1-220ENST00000528402 COX11Q9Y6N1 276 aa10.6□□□□□ -0.71
ECHDC1-220ENST00000528402 IGLV4-3A0A075B6K6 122 aa10.59□□□□□ -0.71
ECHDC1-220ENST00000528402 TRAV8-6A0A0B4J262 113 aa10.59□□□□□ -0.71
ECHDC1-220ENST00000528402 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
ECHDC1-220ENST00000528402 PLAC8L1A1L4L8 177 aa10.59□□□□□ -0.71
ECHDC1-220ENST00000528402 KIR2DL5BQ8NHK3 375 aa10.59□□□□□ -0.71
ECHDC1-220ENST00000528402 AMELXQ99217 191 aa10.59□□□□□ -0.71
ECHDC1-220ENST00000528402 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
ECHDC1-220ENST00000528402 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
ECHDC1-220ENST00000528402 TCTAP57738 103 aa10.58□□□□□ -0.72
ECHDC1-220ENST00000528402 ZNRF2Q8NHG8 242 aa10.58□□□□□ -0.72
ECHDC1-220ENST00000528402 ZNF479Q96JC4 524 aa10.58□□□□□ -0.72
ECHDC1-220ENST00000528402 CHAC1Q9BUX1 264 aa10.58□□□□□ -0.72
ECHDC1-220ENST00000528402 SETXQ7Z333 2677 aaKnown RBP10.58□□□□□ -0.72
ECHDC1-220ENST00000528402 TRGV2A0A075B6R0 118 aa10.58□□□□□ -0.72
ECHDC1-220ENST00000528402 WIPF1O43516 503 aa10.58□□□□□ -0.72
ECHDC1-220ENST00000528402 PRADC1Q9BSG0 188 aa10.58□□□□□ -0.72
ECHDC1-220ENST00000528402 MRPS36P82909 103 aaKnown RBP10.57□□□□□ -0.72
ECHDC1-220ENST00000528402 LINC00469Q8N7U9 141 aa10.57□□□□□ -0.72
ECHDC1-220ENST00000528402 GTSF1LQ9H1H1 148 aa10.57□□□□□ -0.72
ECHDC1-220ENST00000528402 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
ECHDC1-220ENST00000528402 SETD2Q9BYW2 2564 aaPredicted RBP10.57□□□□□ -0.72
ECHDC1-220ENST00000528402 H3BRM9 83 aa10.56□□□□□ -0.72
ECHDC1-220ENST00000528402 APOC4P55056 127 aa10.56□□□□□ -0.72
ECHDC1-220ENST00000528402 TMEM170BQ5T4T1 132 aa10.56□□□□□ -0.72
ECHDC1-220ENST00000528402 MAPKAPK5-AS1Q8N8E1 139 aa10.56□□□□□ -0.72
ECHDC1-220ENST00000528402 DEFB104AQ8WTQ1 72 aa10.56□□□□□ -0.72
ECHDC1-220ENST00000528402 TM2D2Q9BX73 214 aa10.56□□□□□ -0.72
ECHDC1-220ENST00000528402 FN1P02751 2386 aaKnown RBP10.56□□□□□ -0.72
ECHDC1-220ENST00000528402 C2CD3Q4AC94 2353 aa10.56□□□□□ -0.72
ECHDC1-220ENST00000528402 GAGE12BA1L429 117 aa10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 TAX1BP3O14907 124 aa10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 GAGE7O76087 117 aa10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 GAGE12FP0CL80 117 aa10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 GAGE12GP0CL81 117 aa10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 GAGE12IP0CL82 117 aa10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 UBE2D3P61077 147 aa10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 UBE2D2P62837 147 aa10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 SLC25A29Q8N8R3 303 aa10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 CSDC2Q9Y534 153 aaKnown RBP10.55□□□□□ -0.72
ECHDC1-220ENST00000528402 NSD1Q96L73 2696 aaPredicted RBP10.54□□□□□ -0.72
ECHDC1-220ENST00000528402 OTOGQ6ZRI0 2925 aa10.54□□□□□ -0.72
ECHDC1-220ENST00000528402 H7C423 109 aa10.54□□□□□ -0.72
ECHDC1-220ENST00000528402 LINC00612Q8N6U2 182 aa10.54□□□□□ -0.72
ECHDC1-220ENST00000528402 TRGV4A0A0C4DH28 118 aa10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 TMEM223A0PJW6 202 aa10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 LEPROTO15243 131 aa10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 DGAT2L7PQ6IED9 249 aa10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 CEND1Q8N111 149 aa10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 PHLDA1Q8WV24 401 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 PLEKHB2Q96CS7 222 aa10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 OPRPNQ99935 248 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 TTTY13Q9BZ97 58 aa10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 Q9UF83 564 aa10.53□□□□□ -0.72
ECHDC1-220ENST00000528402 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.73
ECHDC1-220ENST00000528402 ZNF815PA8K554 130 aa10.52□□□□□ -0.73
ECHDC1-220ENST00000528402 IGHV3-38A0A0C4DH36 116 aa10.51□□□□□ -0.73
ECHDC1-220ENST00000528402 LYRM9A8MSI8 78 aa10.51□□□□□ -0.73
ECHDC1-220ENST00000528402 SMIM13P0DJ93 91 aa10.51□□□□□ -0.73
ECHDC1-220ENST00000528402 ZNF22P17026 224 aaPredicted RBP10.51□□□□□ -0.73
ECHDC1-220ENST00000528402 GCSHP23434 173 aa10.51□□□□□ -0.73
ECHDC1-220ENST00000528402 A0A0J9YXV3 536 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 J3QQQ9 107 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 LGALS3P17931 250 aaKnown RBP10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 EMP1P54849 157 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 TIRAPP58753 221 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 FHL2Q14192 279 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 FAM104AQ969W3 186 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 HIST1H4GQ99525 98 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 X6R8D5 127 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 IGKV2-29A2NJV5 120 aaPredicted RBP10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 GAGE12JA6NER3 117 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 PTTG1IPP53801 180 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 GAGE4Q13068 117 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 GAGE5Q13069 117 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 UBE2V1Q13404 147 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 GAGE13Q4V321 117 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 SCGB1D4Q6XE38 83 aa10.5□□□□□ -0.73
ECHDC1-220ENST00000528402 CUBNO60494 3623 aa10.49□□□□□ -0.73
ECHDC1-220ENST00000528402 HIVEP1P15822 2718 aa10.49□□□□□ -0.73
ECHDC1-220ENST00000528402 C9orf118A6NHY6 69 aa10.49□□□□□ -0.73
ECHDC1-220ENST00000528402 VAMP3Q15836 100 aa10.49□□□□□ -0.73
ECHDC1-220ENST00000528402 FAM19A3Q7Z5A8 133 aa10.49□□□□□ -0.73
ECHDC1-220ENST00000528402 SBSPONQ8IVN8 264 aa10.49□□□□□ -0.73
ECHDC1-220ENST00000528402 TMEM238LA0A1B0GVL6 79 aa10.48□□□□□ -0.73
ECHDC1-220ENST00000528402 A6NJY4 79 aa10.48□□□□□ -0.73
ECHDC1-220ENST00000528402 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
ECHDC1-220ENST00000528402 SPANXB1Q9NS25 103 aaPredicted RBP10.48□□□□□ -0.73
ECHDC1-220ENST00000528402 UBE2D1P51668 147 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms