RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
TRAPPC4-209ENST00000528230 NAT8Q9UHE5 227 aa7.99□□□□□ -1.13
TRAPPC4-209ENST00000528230 C9JQL5 133 aa7.98□□□□□ -1.13
TRAPPC4-209ENST00000528230 TMEM191AQ9H0A3 160 aa7.98□□□□□ -1.13
TRAPPC4-209ENST00000528230 V9GYV3 84 aa7.98□□□□□ -1.13
TRAPPC4-209ENST00000528230 TRAV26-2A0A0B4J265 109 aa7.97□□□□□ -1.13
TRAPPC4-209ENST00000528230 LECT2O14960 151 aa7.97□□□□□ -1.13
TRAPPC4-209ENST00000528230 NCR2O95944 276 aa7.97□□□□□ -1.13
TRAPPC4-209ENST00000528230 SRSF3P84103 164 aaKnown RBP7.97□□□□□ -1.13
TRAPPC4-209ENST00000528230 RYR1P21817 5038 aa7.97□□□□□ -1.13
TRAPPC4-209ENST00000528230 TRBV6-5A0A0K0K1A5 114 aa7.96□□□□□ -1.14
TRAPPC4-209ENST00000528230 AMTP48728 403 aa7.96□□□□□ -1.14
TRAPPC4-209ENST00000528230 RIGQ13278 110 aa7.96□□□□□ -1.14
TRAPPC4-209ENST00000528230 C14orf177Q52M58 125 aa7.96□□□□□ -1.14
TRAPPC4-209ENST00000528230 LINC00269Q8N2A0 174 aa7.96□□□□□ -1.14
TRAPPC4-209ENST00000528230 C20orf203Q8NBC4 194 aa7.96□□□□□ -1.14
TRAPPC4-209ENST00000528230 RPL39LQ96EH5 51 aaKnown RBP7.96□□□□□ -1.14
TRAPPC4-209ENST00000528230 DNAH5Q8TE73 4624 aa7.96□□□□□ -1.14
TRAPPC4-209ENST00000528230 HSPG2P98160 4391 aa7.95□□□□□ -1.14
TRAPPC4-209ENST00000528230 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
TRAPPC4-209ENST00000528230 H7C423 109 aa7.95□□□□□ -1.14
TRAPPC4-209ENST00000528230 UBE2L6O14933 153 aa7.95□□□□□ -1.14
TRAPPC4-209ENST00000528230 RAB4AP20338 218 aa7.95□□□□□ -1.14
TRAPPC4-209ENST00000528230 REG3AQ06141 175 aa7.95□□□□□ -1.14
TRAPPC4-209ENST00000528230 ADIRFQ15847 76 aa7.95□□□□□ -1.14
TRAPPC4-209ENST00000528230 NUP35Q8NFH5 326 aa7.95□□□□□ -1.14
TRAPPC4-209ENST00000528230 NAT8BQ9UHF3 227 aa7.95□□□□□ -1.14
TRAPPC4-209ENST00000528230 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC4-209ENST00000528230 SDHAF1A6NFY7 115 aa7.94□□□□□ -1.14
TRAPPC4-209ENST00000528230 KRTAP26-1Q6PEX3 210 aa7.94□□□□□ -1.14
TRAPPC4-209ENST00000528230 MRAP2Q96G30 205 aa7.94□□□□□ -1.14
TRAPPC4-209ENST00000528230 RNF185Q96GF1 192 aa7.94□□□□□ -1.14
TRAPPC4-209ENST00000528230 IGLV4-60A0A075B6I1 120 aa7.93□□□□□ -1.14
TRAPPC4-209ENST00000528230 SMIM27A0A1W2PRY6 76 aa7.93□□□□□ -1.14
TRAPPC4-209ENST00000528230 I3L3M4 83 aa7.93□□□□□ -1.14
TRAPPC4-209ENST00000528230 PMCHP20382 165 aa7.93□□□□□ -1.14
TRAPPC4-209ENST00000528230 RAB14P61106 215 aa7.93□□□□□ -1.14
TRAPPC4-209ENST00000528230 DEFB104AQ8WTQ1 72 aa7.93□□□□□ -1.14
TRAPPC4-209ENST00000528230 ST20Q9HBF5 79 aa7.93□□□□□ -1.14
TRAPPC4-209ENST00000528230 APOBP04114 4563 aaKnown RBP7.93□□□□□ -1.14
TRAPPC4-209ENST00000528230 A0A1B0GW15 77 aa7.92□□□□□ -1.14
TRAPPC4-209ENST00000528230 EPM2AB3EWF7 344 aa7.92□□□□□ -1.14
TRAPPC4-209ENST00000528230 PPP1R17O96001 155 aa7.92□□□□□ -1.14
TRAPPC4-209ENST00000528230 APCSP02743 223 aa7.92□□□□□ -1.14
TRAPPC4-209ENST00000528230 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
TRAPPC4-209ENST00000528230 CLPSL2Q6UWE3 100 aa7.92□□□□□ -1.14
TRAPPC4-209ENST00000528230 Q6ZSA8 131 aa7.92□□□□□ -1.14
TRAPPC4-209ENST00000528230 AMN1Q8IY45 258 aa7.92□□□□□ -1.14
TRAPPC4-209ENST00000528230 FAM30AQ9NZY2 134 aa7.92□□□□□ -1.14
TRAPPC4-209ENST00000528230 USP17L23D6RBM5 183 aa7.91□□□□□ -1.14
TRAPPC4-209ENST00000528230 HLA-DQA1P01909 254 aa7.91□□□□□ -1.14
TRAPPC4-209ENST00000528230 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
TRAPPC4-209ENST00000528230 CLRN3Q8NCR9 226 aa7.91□□□□□ -1.14
TRAPPC4-209ENST00000528230 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.14
TRAPPC4-209ENST00000528230 GAS8-AS1O95177 125 aa7.9□□□□□ -1.14
TRAPPC4-209ENST00000528230 ESDP10768 282 aa7.9□□□□□ -1.14
TRAPPC4-209ENST00000528230 ZNF25P17030 456 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC4-209ENST00000528230 FAM104BQ5XKR9 115 aa7.9□□□□□ -1.14
TRAPPC4-209ENST00000528230 AMMECR1LQ6DCA0 310 aa7.9□□□□□ -1.14
TRAPPC4-209ENST00000528230 DGAT2L7PQ6IED9 249 aa7.9□□□□□ -1.14
TRAPPC4-209ENST00000528230 LINC00528Q8N1L1 170 aa7.9□□□□□ -1.14
TRAPPC4-209ENST00000528230 IGLV10-54A0A075B6I4 117 aa7.89□□□□□ -1.15
TRAPPC4-209ENST00000528230 LINC00862A6NCI5 91 aa7.89□□□□□ -1.15
TRAPPC4-209ENST00000528230 VCYO14598 125 aa7.89□□□□□ -1.15
TRAPPC4-209ENST00000528230 TSHBP01222 138 aa7.89□□□□□ -1.15
TRAPPC4-209ENST00000528230 S100A8P05109 93 aa7.89□□□□□ -1.15
TRAPPC4-209ENST00000528230 FGF6P10767 208 aa7.89□□□□□ -1.15
TRAPPC4-209ENST00000528230 RPS10P46783 165 aaKnown RBP7.89□□□□□ -1.15
TRAPPC4-209ENST00000528230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC4-209ENST00000528230 IGKV2-29A2NJV5 120 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC4-209ENST00000528230 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
TRAPPC4-209ENST00000528230 PPP1R2P9O14990 202 aa7.88□□□□□ -1.15
TRAPPC4-209ENST00000528230 PRSS1P07477 247 aa7.88□□□□□ -1.15
TRAPPC4-209ENST00000528230 PNRC1Q12796 327 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC4-209ENST00000528230 Q5VSD8 79 aa7.88□□□□□ -1.15
TRAPPC4-209ENST00000528230 RNASEKQ6P5S7 137 aaKnown RBP7.88□□□□□ -1.15
TRAPPC4-209ENST00000528230 NRACQ8N912 160 aa7.88□□□□□ -1.15
TRAPPC4-209ENST00000528230 TRBV24-1A0A075B6N3 115 aa7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 SMR3BP02814 79 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 CAMPP49913 170 aa7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 SUMO2P61956 95 aaKnown RBP7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 LINC01620Q4KN68 170 aa7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 MRPL51Q4U2R6 128 aaKnown RBP7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 CLLU1Q5K131 121 aa7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 TMEM101Q96IK0 257 aa7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 BTF3L4Q96K17 158 aa7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 TMEM242Q9NWH2 141 aa7.87□□□□□ -1.15
TRAPPC4-209ENST00000528230 A0A1B0GXF2 115 aa7.86□□□□□ -1.15
TRAPPC4-209ENST00000528230 F8W036 122 aa7.86□□□□□ -1.15
TRAPPC4-209ENST00000528230 SMKR1H3BMG3 65 aa7.86□□□□□ -1.15
TRAPPC4-209ENST00000528230 RPL32P62910 135 aaKnown RBP7.86□□□□□ -1.15
TRAPPC4-209ENST00000528230 HBBP68871 147 aa7.86□□□□□ -1.15
TRAPPC4-209ENST00000528230 MRPL52Q86TS9 123 aaKnown RBP7.86□□□□□ -1.15
TRAPPC4-209ENST00000528230 C9orf163Q8N9P6 203 aa7.86□□□□□ -1.15
TRAPPC4-209ENST00000528230 OR5A1Q8NGJ0 315 aa7.86□□□□□ -1.15
TRAPPC4-209ENST00000528230 C20orf78Q9BR46 151 aa7.86□□□□□ -1.15
TRAPPC4-209ENST00000528230 PCLOQ9Y6V0 5065 aa7.85□□□□□ -1.15
TRAPPC4-209ENST00000528230 C7orf77A4D0Y5 90 aa7.85□□□□□ -1.15
TRAPPC4-209ENST00000528230 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC4-209ENST00000528230 CKS2P33552 79 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms