RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 RAB5CP51148 216 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 RAB4BP61018 213 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 IQCJQ1A5X6 159 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 CNPY1Q3B7I2 92 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 SAPCD1Q5SSQ6 148 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 SUN5Q8TC36 379 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 DERL1Q9BUN8 251 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 SMIM3Q9BZL3 60 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 PSORS1C2Q9UIG4 136 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 EPDR1Q9UM22 224 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 HSPB11Q9Y547 144 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 TMSB15BA0A087X1C1 80 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 GVQW2A0A096LPI5 108 aaPredicted RBP4.88□□□□□ -1.63
USP48-212ENST00000527823 TRAV26-2A0A0B4J265 109 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 A0A1W2PPV4 95 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 SIX6O95475 246 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 STAG3L2P0CL84 134 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 STAG3L3P0CL85 134 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 GCHFRP30047 84 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 CDC34P49427 236 aaPredicted RBP4.88□□□□□ -1.63
USP48-212ENST00000527823 CACNG7P62955 275 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 RPL24P83731 157 aaKnown RBP4.88□□□□□ -1.63
USP48-212ENST00000527823 PRR4Q16378 134 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 SMIM29Q86T20 159 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 ZNF664Q8N3J9 261 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 OR10AG1Q8NH19 301 aa4.88□□□□□ -1.63
USP48-212ENST00000527823 IGHV1-24A0A0C4DH33 117 aa4.87□□□□□ -1.63
USP48-212ENST00000527823 LYRM1O43325 122 aa4.87□□□□□ -1.63
USP48-212ENST00000527823 GZMBP10144 247 aa4.87□□□□□ -1.63
USP48-212ENST00000527823 TMEM97Q5BJF2 176 aa4.87□□□□□ -1.63
USP48-212ENST00000527823 WFDC1Q9HC57 220 aa4.87□□□□□ -1.63
USP48-212ENST00000527823 PEX7O00628 323 aa4.86□□□□□ -1.63
USP48-212ENST00000527823 IFNA7P01567 189 aa4.86□□□□□ -1.63
USP48-212ENST00000527823 COX8CQ7Z4L0 72 aa4.86□□□□□ -1.63
USP48-212ENST00000527823 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.86□□□□□ -1.63
USP48-212ENST00000527823 SCGB1C1Q8TD33 95 aa4.86□□□□□ -1.63
USP48-212ENST00000527823 AQP10Q96PS8 301 aa4.86□□□□□ -1.63
USP48-212ENST00000527823 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
USP48-212ENST00000527823 DEFA3P59666 94 aa4.85□□□□□ -1.63
USP48-212ENST00000527823 ZNF674Q2M3X9 581 aa4.85□□□□□ -1.63
USP48-212ENST00000527823 FAM162BQ5T6X4 162 aa4.85□□□□□ -1.63
USP48-212ENST00000527823 IGLV5-45A0A087WSX0 123 aa4.84□□□□□ -1.63
USP48-212ENST00000527823 KRTAP1-4P0C5Y4 121 aa4.84□□□□□ -1.63
USP48-212ENST00000527823 SULT1A2P50226 295 aa4.84□□□□□ -1.63
USP48-212ENST00000527823 SNRPEP62304 92 aaKnown RBP4.84□□□□□ -1.63
USP48-212ENST00000527823 PPP1R1CQ8WVI7 109 aa4.84□□□□□ -1.63
USP48-212ENST00000527823 LINC00526Q96FQ7 95 aa4.84□□□□□ -1.63
USP48-212ENST00000527823 TMEM243Q9BU79 118 aa4.84□□□□□ -1.63
USP48-212ENST00000527823 TMEM167BQ9NRX6 74 aa4.84□□□□□ -1.63
USP48-212ENST00000527823 LINC00474Q9P2X8 69 aa4.84□□□□□ -1.63
USP48-212ENST00000527823 IGKV3OR2-268A0A0C4DH90 116 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 MUC21A0A140T8X8 626 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 A0A1W2PRE2 83 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 SNAI2O43623 268 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 H2BFSP57053 126 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 GAGE2BQ13066 116 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 GAGE2EQ4V326 116 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 GAGE2AQ6NT46 116 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 CARD19Q96LW7 228 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 ZNF471Q9BX82 626 aaPredicted RBP4.83□□□□□ -1.64
USP48-212ENST00000527823 GAGE2DQ9UEU5 116 aa4.83□□□□□ -1.64
USP48-212ENST00000527823 A0A1W2PNN7 141 aa4.82□□□□□ -1.64
USP48-212ENST00000527823 M0QY20 66 aa4.82□□□□□ -1.64
USP48-212ENST00000527823 MPC2O95563 127 aa4.82□□□□□ -1.64
USP48-212ENST00000527823 CXorf1O96002 111 aa4.82□□□□□ -1.64
USP48-212ENST00000527823 MT-ND6P03923 174 aa4.82□□□□□ -1.64
USP48-212ENST00000527823 RPL12P30050 165 aaKnown RBP4.82□□□□□ -1.64
USP48-212ENST00000527823 UBE2G2P60604 165 aa4.82□□□□□ -1.64
USP48-212ENST00000527823 C1orf137Q5JT78 98 aa4.82□□□□□ -1.64
USP48-212ENST00000527823 CHCHD10Q8WYQ3 142 aaPredicted RBP4.82□□□□□ -1.64
USP48-212ENST00000527823 AP1S3Q96PC3 154 aa4.82□□□□□ -1.64
USP48-212ENST00000527823 IGLV1-50A0A075B6I6 118 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 CCDC160A6NGH7 325 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 H0Y9J4 135 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 LTAP01374 205 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 CXCL1P09341 107 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 VPREB1P12018 145 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 NKX2-5P52952 324 aaPredicted RBP4.81□□□□□ -1.64
USP48-212ENST00000527823 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
USP48-212ENST00000527823 ZNF726P1Q15940 193 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 PGLYRP4Q96LB8 373 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 PKIGQ9Y2B9 76 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 ZFP30Q9Y2G7 519 aa4.81□□□□□ -1.64
USP48-212ENST00000527823 FAM74A7A6NL05 159 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 IGLV7-43P04211 117 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 MGPP08493 103 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 OR5AL1P0C617 328 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 PET100P0DJ07 73 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 ATP6V0CP27449 155 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 SPANXN1Q5VSR9 72 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 PHF5AQ7RTV0 110 aaKnown RBP4.8□□□□□ -1.64
USP48-212ENST00000527823 KRTAP11-1Q8IUC1 163 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 FER1L6-AS1Q8NA97 138 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 DIRC1Q969H9 104 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 HIST1H2BAQ96A08 127 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 FMC1Q96HJ9 113 aa4.8□□□□□ -1.64
USP48-212ENST00000527823 PSMG3Q9BT73 122 aaPredicted RBP4.8□□□□□ -1.64
USP48-212ENST00000527823 FAM240BA0A1B0GVZ2 78 aa4.79□□□□□ -1.64
USP48-212ENST00000527823 UBE2L6O14933 153 aa4.79□□□□□ -1.64
USP48-212ENST00000527823 BCL2P10415 239 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms